Ari Frank

2.7k citations

14 papers · 2.0k indexed · 1 hit paper · h-index 14

Impact in

Spectroscopy top 0.5%
- Advanced Proteomics Techniques and Applications
- Mass Spectrometry Techniques and Applications
- Analytical Chemistry and Chromatography
Molecular Biology top 5%
- Metabolomics and Mass Spectrometry Studies
- Genomics and Phylogenetic Studies
- Machine Learning in Bioinformatics
- Identification and Quantification in Food
- Glycosylation and Glycoproteins Research

Papers in

Spectroscopy 13
- Advanced Proteomics Techniques and Applications 13
- Mass Spectrometry Techniques and Applications 13
- Analytical Chemistry and Chromatography 1
Molecular Biology 12
- Metabolomics and Mass Spectrometry Studies 5
- Machine Learning in Bioinformatics 3
- Identification and Quantification in Food 3

Co-authors: Pavel A. Pevzner Stephen Tanner Nuno Bandeira Vineet Bafna Marc C. Mumby Hongjun Shu Ebrahim Zandi Richard Smith
Journals: Journal of Proteome Research (7 papers)Analytical Chemistry (3 papers)Nature Methods (1 paper)PROTEOMICS (1 paper)Proceedings of the National Academy of Sciences (1 paper)
Partner nations: United States Germany Switzerland

In The Last Decade

Ari Frank

14 papers receiving 2.0k citations

Hit Papers

align trajectories log scale

PepNovo: De Novo Peptide Sequencing via Probabilistic Network Modeling 2005 · 508 citations

Peers

Countries citing papers authored by Ari Frank

Since Specialization

Citations

This map shows the geographic impact of Ari Frank's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Ari Frank with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Ari Frank more than expected).

Fields of papers citing papers by Ari Frank

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Ari Frank. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Ari Frank. The network helps show where Ari Frank may publish in the future.

Co-authorship network

The 25 scholars most cited alongside Ari Frank, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Ari Frank Line = papers co-authored together Ari Frank links everyone, so they are left out of the graph.

All Works

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14 of 14 papers shown

#	Work
1	Sequencing-Grade De novo Analysis of MS/MS Triplets (CID/HCD/ETD) From Overlapping Peptides Journal of Proteome Research ·Adrian Guthals, Karl R. Clauser, Ari Frank, Nuno Bandeira	2013	52
2	Predicting execution bottlenecks in map-reduce clusters Edward Bortnikov, Ari Frank, Eshcar Hillel, Sriram Rao	2012	37
3	Spectral archives: extending spectral libraries to analyze both identified and unidentified spectra Nature Methods ·Ari Frank, Matthew Monroe, Anuj Shah, Jeremy Carver, Nuno Bandeira, Ronald Moore, Gordon Anderson, Richard Smith, Pavel A. Pevzner	2011	77
4	A Ranking-Based Scoring Function for Peptide−Spectrum Matches Journal of Proteome Research ·Ari Frank	2009	66
5	Predicting Intensity Ranks of Peptide Fragment Ions Journal of Proteome Research ·Ari Frank	2009	62
6	Interpreting Top-Down Mass Spectra Using Spectral Alignment Analytical Chemistry ·Ari Frank, James J. Pesavento, Craig A. Mizzen, Neil L. Kelleher, Pavel A. Pevzner	2008	57
7	Sequence similarity‐driven proteomics in organisms with unknown genomes by LC‐MS/MS and automated *de novo* sequencing PROTEOMICS ·Patrice Waridel, Ari Frank, Henrik Thomas, Vineeth Surendranath, Shamil R. Sunyaev, Pavel A. Pevzner, Andriy Shevchenko	2007	85
8	Protein identification by spectral networks analysis Proceedings of the National Academy of Sciences ·Nuno Bandeira, Dekel Tsur, Ari Frank, Pavel A. Pevzner	2007	130
9	Clustering Millions of Tandem Mass Spectra Journal of Proteome Research ·Ari Frank, Nuno Bandeira, Zhouxin Shen, Stephen Tanner, Steven P. Briggs, Richard Smith, Pavel A. Pevzner	2007	197
10	De Novo Peptide Sequencing and Identification with Precision Mass Spectrometry Journal of Proteome Research ·Ari Frank, Mikhail M. Savitski, Michael L. Nielsen, Roman A. Zubarev, Pavel A. Pevzner	2006	151
11	Rapid Validation of Protein Identifications with the Borderline Statistical Confidence via De Novo Sequencing and MS BLAST Searches Journal of Proteome Research ·Natalie Wielsch, Henrik Thomas, Vineeth Surendranath, Patrice Waridel, Ari Frank, Pavel A. Pevzner, Andrej Shevchenko	2006	39
12	InsPecT: Identification of Posttranslationally Modified Peptides from Tandem Mass Spectra Analytical Chemistry ·Stephen Tanner, Hongjun Shu, Ari Frank, Bahman Rasuli, Ebrahim Zandi, Marc C. Mumby, Pavel A. Pevzner, Vineet Bafna	2005	464
13	Peptide Sequence Tags for Fast Database Search in Mass-Spectrometry Journal of Proteome Research ·Ari Frank, Stephen Tanner, Vineet Bafna, Pavel A. Pevzner	2005	95
14	PepNovo: De Novo Peptide Sequencing via Probabilistic Network Modeling Analytical Chemistry ·Ari Frank, Pavel A. Pevzner Hit paper breakdown →	2005	508

About Ari Frank

Ari Frank is a scholar working on Spectroscopy, Molecular Biology, Information Systems, Computer Networks and Communications and Infectious Diseases, having authored 14 papers that have together received 2.0k indexed citations. Recurring topics across this work include Advanced Proteomics Techniques and Applications (13 papers), Mass Spectrometry Techniques and Applications (13 papers), Metabolomics and Mass Spectrometry Studies (5 papers), Machine Learning in Bioinformatics (3 papers), Identification and Quantification in Food (3 papers), IoT and Edge/Fog Computing (1 paper), Distributed and Parallel Computing Systems (1 paper) and Analytical Chemistry and Chromatography (1 paper). The work is most often cited by research in Spectroscopy (1.5k citations), Molecular Biology (1.7k citations), Microbiology (48 citations), Pharmacology (85 citations) and Ecology (86 citations). Ari Frank has collaborated with scholars based in United States, Germany and Switzerland. Frequent co-authors include Pavel A. Pevzner, Stephen Tanner, Nuno Bandeira, Vineet Bafna, Marc C. Mumby, Hongjun Shu, Ebrahim Zandi, Richard Smith, Dekel Tsur and Roman A. Zubarev. Their work appears in journals such as Journal of Proteome Research, Analytical Chemistry, Nature Methods, PROTEOMICS and Proceedings of the National Academy of Sciences.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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