Andy Perkins

1.6k citations

50 papers · 1.1k indexed · h-index 21

Impact in

Microbiology top 10%
- Microbial infections and disease research
Reproductive Medicine top 10%
- Sperm and Testicular Function

Papers in ⓘ

Health Informatics 2
Microbiology 6
- Microbial infections and disease research 6

Co-authors: Michael A. Langston (10 shared papers)Burak Ekşioğlu (4 shared papers)Juliet D. Tang (4 shared papers)Brynn H. Voy (4 shared papers)Arnold M. Saxton (4 shared papers)Çetin Yüceer (1 shared paper)Erdoğan Memili (5 shared papers)W. Paul Williams (3 shared papers)
Journals: BMC Bioinformatics (5 papers)PLoS ONE (4 papers)Scientific Reports (3 papers)Reproductive Biology and Endocrinology (2 papers)Applied and Environmental Microbiology (2 papers)
Partner nations: United States Sweden Türkiye

In The Last Decade

Andy Perkins

48 papers receiving 1.0k citations

Peers

Countries citing papers authored by Andy Perkins

Since Specialization

Citations

This map shows the geographic impact of Andy Perkins's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Andy Perkins with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Andy Perkins more than expected).

Fields of papers citing papers by Andy Perkins

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Andy Perkins. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Andy Perkins. The network helps show where Andy Perkins may publish in the future.

Co-authors

The 25 scholars most cited alongside Andy Perkins, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Andy Perkins Line = papers co-authored together Andy Perkins links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

Showing the 20 most-cited of 50 papers — load more, or switch the sort, to bring in the rest.

#	Work
1	Clustering of high throughput gene expression data Computers & Operations Research ·Harun Pirim, Burak Ekşioğlu, Andy Perkins, Çetin Yüceer	2012	83
2	Dynamics of microRNAs in bull spermatozoa Reproductive Biology and Endocrinology ·Aruna Govindaraju, Alper Uzun, LaShonda Robertson, Mehmet Osman Atlı, Abdullah Kaya, Einko Topper, Elizabeth Crate, James F. Padbury, Andy Perkins, Erdoğan Memili	2012	82
3	Extracting Gene Networks for Low-Dose Radiation Using Graph Theoretical Algorithms PLoS Computational Biology ·Brynn H. Voy, Jon A. Scharff, Andy Perkins, Arnold M. Saxton, Bhavesh Borate, Elissa J. Chesler, Lisa K Branstetter, Michael A. Langston	2006	79
4	Threshold selection in gene co-expression networks using spectral graph theory techniques BMC Bioinformatics ·Andy Perkins, Michael A. Langston	2009	68
5	Comparative genomics of Aeromonas veronii: Identification of a pathotype impacting aquaculture globally PLoS ONE ·Hasan C. Tekedar, Salih Kumru, Jochen Blom, Andy Perkins, Matt J. Griffin, Hossam Abdelhamed, Attila Karsi, Mark L. Lawrence	2019	62
6	A systematic comparison of genome-scale clustering algorithms BMC Bioinformatics ·Jeremy J. Jay, John D. Eblen, Yun Zhang, Mikael Benson, Andy Perkins, Arnold M. Saxton, Brynn H. Voy, Elissa J. Chesler, Michael A. Langston	2012	49
7	Genome‐level analysis of genetic regulation of liver gene expression networks† Hepatology ·Daniel M. Gatti, Akira Maki, Elissa J. Chesler, Roumyana Kirova, Oksana Kosyk, Lu Lu, Kenneth F. Manly, Robert W. Williams, Andy Perkins, Michael A. Langston, David W. Threadgill, Ivan Rusyn	2007	48
8	Using genome-wide associations to identify metabolic pathways involved in maize aflatoxin accumulation resistance BMC Genomics ·Juliet D. Tang, Andy Perkins, W. Paul Williams, Marilyn L. Warburton	2015	44
9	Genome‐Wide Association Mapping of Aspergillus flavus and Aflatoxin Accumulation Resistance in Maize Crop Science ·Marilyn L. Warburton, Juliet D. Tang, Gary L. Windham, Leigh K. Hawkins, Seth C. Murray, Wenwei Xu, Debbie Boykin, Andy Perkins, W. Paul Williams	2015	41
10	Acetylation and methylation of sperm histone 3 lysine 27 (H3K27ac and H3K27me3) are associated with bull fertility Andrologia ·Naseer A. Kutchy, Erika S. B. Menezes, Adriana Chiappetta, Weihong Tan, Robert W. Wills, Abdullah Kaya, Einko Topper, Arlindo A. Moura, Andy Perkins, Erdoğan Memili	2017	40
11	Whole blood transcriptomic analysis of beef cattle at arrival identifies potential predictive molecules and mechanisms that indicate animals that naturally resist bovine respiratory disease PLoS ONE ·Matthew A. Scott, Amelia R. Woolums, Cyprianna E. Swiderski, Andy Perkins, Bindu Nanduri, David R. Smith, Brandi B. Karisch, William B. Epperson, J. R. Blanton	2020	36
12	Research for recovery: a review of the drugs evidence base. David Best, Andrew Rome, Kirstie A. Hanning, William L. White, Michael Gossop, Avril Taylor, Andy Perkins	2010	35
13	Gene Expression Analysis of Copper Tolerance and Wood Decay in the Brown Rot Fungus Fibroporia radiculosa Applied and Environmental Microbiology ·Juliet D. Tang, L Parker, Andy Perkins, Tad S. Sonstegard, Steven Schroeder, Darrel D. Nicholas, Susan V. Diehl	2012	35
14	Molecular Physiognomies and Applications of Adipose-Derived Stem Cells Stem Cell Reviews and Reports ·Fatma Uzbaş, I. D. May, A. M. Parisi, Simon Thompson, Adnan Kaya, Andy Perkins, Erdoğan Memili	2014	33
15	A module-based analytical strategy to identify novel disease-associated genes shows an inhibitory role for interleukin 7 Receptor in allergic inflammation BMC Systems Biology ·Reza Mobini, Bengt Åndersson, Jonas S. Erjefält, Mirjana Hahn‐Zoric, Michael A. Langston, Andy Perkins, Lars‐Olaf Cardell, Mikael Benson	2009	28
16	Gender differences in inflammatory proteins and pathways in seasonal allergic rhinitis Cytokine ·Fredrik Barrenäs, Bengt Åndersson, Lars‐Olaf Cardell, Michael A. Langston, Reza Mobini, Andy Perkins, Juhani T. Soini, Arne Ståhl, Mikael Benson	2008	27
17	Short-Read Sequencing for Genomic Analysis of the Brown Rot Fungus Fibroporia radiculosa Applied and Environmental Microbiology ·Juliet D. Tang, Andy Perkins, Tad S. Sonstegard, Steven Schroeder, Shane C. Burgess, Susan V. Diehl	2012	25
18	Relating significance and relations of differentially expressed genes in response to Aspergillus flavus infection in maize Scientific Reports ·Matthew Constantine Asters, W. Paul Williams, Andy Perkins, John E. Mylroie, Gary L. Windham, Xueyan Shan	2014	24
19	Toward a more holistic method of genome assembly assessment BMC Bioinformatics ·Adam Thrash, Federico G. Hoffmann, Andy Perkins	2020	22
20	Effects of florfenicol feeding on diversity and composition of the intestinal microbiota of channel catfish ( Ictalurus punctatus ) Aquaculture Research ·Hossam Abdelhamed, Ozan Ozdemir, Geoffrey C. Waldbieser, Andy Perkins, Mark L. Lawrence, Attila Karsi	2019	22

About Andy Perkins

Andy Perkins is a scholar working on Health Informatics, Microbiology, Molecular Biology, Genetics and Reproductive Medicine, having authored 50 papers that have together received 1.1k indexed citations. Recurring topics across this work include Bioinformatics and Genomic Networks (12 papers), Gene expression and cancer classification (11 papers), Genomics and Phylogenetic Studies (7 papers), Microbial infections and disease research (6 papers), Genetic Mapping and Diversity in Plants and Animals (5 papers), RNA and protein synthesis mechanisms (5 papers), Genetic diversity and population structure (4 papers) and Viral Infections and Vectors (4 papers). The work is most often cited by research in Microbiology (66 citations), Reproductive Medicine (81 citations), Genetics (192 citations), Molecular Biology (439 citations) and Agronomy and Crop Science (64 citations). Andy Perkins has collaborated with scholars based in United States, Sweden and Türkiye. Frequent co-authors include Michael A. Langston, Burak Ekşioğlu, Juliet D. Tang, Brynn H. Voy, Arnold M. Saxton, Çetin Yüceer, Erdoğan Memili, W. Paul Williams, Elissa J. Chesler and Marilyn L. Warburton. Their work appears in journals such as BMC Bioinformatics, PLoS ONE, Scientific Reports, Reproductive Biology and Endocrinology and Applied and Environmental Microbiology.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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