Zilu Ye

1.9k total citations · 1 hit paper
34 papers, 675 citations indexed

About

Zilu Ye is a scholar working on Molecular Biology, Spectroscopy and Oncology. According to data from OpenAlex, Zilu Ye has authored 34 papers receiving a total of 675 indexed citations (citations by other indexed papers that have themselves been cited), including 28 papers in Molecular Biology, 10 papers in Spectroscopy and 5 papers in Oncology. Recurrent topics in Zilu Ye's work include Glycosylation and Glycoproteins Research (14 papers), Advanced Proteomics Techniques and Applications (10 papers) and Epigenetics and DNA Methylation (5 papers). Zilu Ye is often cited by papers focused on Glycosylation and Glycoproteins Research (14 papers), Advanced Proteomics Techniques and Applications (10 papers) and Epigenetics and DNA Methylation (5 papers). Zilu Ye collaborates with scholars based in Denmark, China and United States. Zilu Ye's co-authors include Sergey Y. Vakhrushev, Henrik Clausen, Yang Mao, Jesper V. Olsen, Eric Bennett, Yoshiki Narimatsu, Hiren J. Joshi, Hans H. Wandall, Tanveer S. Batth and Patrick Rüther and has published in prestigious journals such as Cell, Journal of Biological Chemistry and Nature Communications.

In The Last Decade

Zilu Ye

30 papers receiving 669 citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Enhanced sensitivity and scalability with a Chip-Tip workflow enables deep single-cell proteomics

2025 22 citations Zilu Ye, Pierre Sabatier et al. Nature Methods profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Zilu Ye Denmark	15	546	198	130	113	75	34	675
Suttipong Suttapitugsakul United States	15	541 1.0×	209 1.1×	73 0.6×	128 1.1×	68 0.9×	27	665
Weiqian Cao China	14	651 1.2×	299 1.5×	116 0.9×	135 1.2×	79 1.1×	36	754
Shadi Toghi Eshghi United States	14	776 1.4×	370 1.9×	101 0.8×	193 1.7×	141 1.9×	16	896
Ehwang Song United States	16	705 1.3×	432 2.2×	69 0.5×	88 0.8×	120 1.6×	20	848
Crystal Kirmiz United States	7	487 0.9×	178 0.9×	86 0.7×	180 1.6×	72 1.0×	7	573
Gerda C. M. Vreeker Netherlands	10	358 0.7×	101 0.5×	70 0.5×	110 1.0×	70 0.9×	11	423
Edward S. X. Moh Australia	10	310 0.6×	94 0.5×	97 0.7×	79 0.7×	58 0.8×	26	419
Luísa Silva Portugal	5	369 0.7×	58 0.3×	150 1.2×	94 0.8×	73 1.0×	6	460
Christopher Ashwood United States	11	322 0.6×	123 0.6×	53 0.4×	95 0.8×	27 0.4×	15	393
Mindy Porterfield United States	9	458 0.8×	67 0.3×	138 1.1×	111 1.0×	35 0.5×	9	520

Countries citing papers authored by Zilu Ye

Since Specialization

Citations

This map shows the geographic impact of Zilu Ye's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Zilu Ye with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Zilu Ye more than expected).

Fields of papers citing papers by Zilu Ye

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Zilu Ye. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Zilu Ye. The network helps show where Zilu Ye may publish in the future.

Co-authorship network of co-authors of Zilu Ye

This figure shows the co-authorship network connecting the top 25 collaborators of Zilu Ye. A scholar is included among the top collaborators of Zilu Ye based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Zilu Ye. Zilu Ye is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Zhao, Xu, Yilin Chen, Honghui Wang, et al.. (2025). Efficacy of nitrate and biochar@birnessite composite microspheres for simultaneous suppression of As(III) mobilization and greenhouse gas emissions in flooded paddy soils. Environmental Research. 279(Pt 1). 121757–121757. 17 indexed citations

Li, Ting, Xiao-Ping Ye, Liang Qi, et al.. (2025). Tudor-based proteomic strategy pan-specifically enriches and identifies protein arginine methylation. EMBO Reports. 26(23). 5649–5672.

Ye, Zilu, Pierre Sabatier, Ulises H. Guzmán, et al.. (2025). Enhanced sensitivity and scalability with a Chip-Tip workflow enables deep single-cell proteomics. Nature Methods. 22(3). 499–509. 22 indexed citations breakdown →

Sabatier, Pierre, Ulises H. Guzmán, Longteng Wang, et al.. (2025). Global analysis of protein turnover dynamics in single cells. Cell. 188(9). 2433–2450.e21. 6 indexed citations

Li, Peipei, Mei Liang, Jian Chen, et al.. (2025). Elevated activity of plasma dipeptidyl peptidase 4 upon stress can be targeted to reverse tumor immunosuppression. Pharmacological Research. 215. 107696–107696.

Song, Jiangbo, Zhiquan Li, Héctor Herranz, et al.. (2024). FOXO-regulated OSER1 reduces oxidative stress and extends lifespan in multiple species. Nature Communications. 15(1). 7144–7144. 12 indexed citations

Ye, Zilu, Hans H. Wandall, & Sally Dabelsteen. (2024). Phosphoproteomic Analysis and Organotypic Cultures for the Study of Signaling Pathways. BIO-PROTOCOL. 14(1339). e4941–e4941. 1 indexed citations

Ye, Zilu, et al.. (2024). An MSRE-Assisted Glycerol-Enhanced RPA-CRISPR/Cas12a Method for Methylation Detection. Biosensors. 14(12). 608–608. 3 indexed citations

Ye, Zilu, Pierre Sabatier, Javier Martín‐González, et al.. (2024). One-Tip enables comprehensive proteome coverage in minimal cells and single zygotes. Nature Communications. 15(1). 2474–2474. 36 indexed citations

10.

Haan, Noortje de, Oliver C. Grant, Zilu Ye, et al.. (2023). Sensitive and Specific Global Cell Surface N-Glycoproteomics Shows Profound Differences Between Glycosylation Sites and Subcellular Components. Analytical Chemistry. 95(47). 17328–17336. 9 indexed citations

11.

Ye, Zilu, Lise Hafkenscheid, Mathias I. Nielsen, et al.. (2023). Galectin-1 induces a tumor-associated macrophage phenotype and upregulates indoleamine 2,3-dioxygenase-1. iScience. 26(7). 106984–106984. 12 indexed citations

12.

Chen, Yen‐Hsi, Weihua Tian, Makiko Yasuda, et al.. (2023). A universal GlycoDesign for lysosomal replacement enzymes to improve circulation time and biodistribution. Frontiers in Bioengineering and Biotechnology. 11. 1128371–1128371. 4 indexed citations

13.

Song, Peng, Shaojun Liu, Dekang Liu, et al.. (2022). CNOT6: A Novel Regulator of DNA Mismatch Repair. Cells. 11(3). 521–521. 7 indexed citations

14.

Coillie, Julie Van, Morten Alder Schulz, Arthur E. H. Bentlage, et al.. (2022). Role of N-Glycosylation in FcγRIIIa interaction with IgG. Frontiers in Immunology. 13. 987151–987151. 27 indexed citations

15.

Ye, Zilu, Tanveer S. Batth, Patrick Rüther, & Jesper V. Olsen. (2022). A deeper look at carrier proteome effects for single-cell proteomics. Communications Biology. 5(1). 150–150. 38 indexed citations

16.

Nielsen, Mathias I., Noortje de Haan, Weston Kightlinger, et al.. (2022). Global mapping of GalNAc-T isoform-specificities and O-glycosylation site-occupancy in a tissue-forming human cell line. Nature Communications. 13(1). 6257–6257. 22 indexed citations

17.

Sun, Lingbo, Zilu Ye, Rebecca Nason, et al.. (2021). Installation of O-glycan sulfation capacities in human HEK293 cells for display of sulfated mucins. Journal of Biological Chemistry. 298(2). 101382–101382. 12 indexed citations

18.

Napoletano, Chiara, Zilu Ye, Hassan Rahimi, et al.. (2020). Investigating Patterns of Immune Interaction in Ovarian Cancer: Probing the O-glycoproteome by the Macrophage Galactose-Like C-Type Lectin (MGL). Cancers. 12(10). 2841–2841. 14 indexed citations

19.

Madsen, Thomas D., John Hintze, Zilu Ye, et al.. (2020). An atlas of O-linked glycosylation on peptide hormones reveals diverse biological roles. Nature Communications. 11(1). 4033–4033. 52 indexed citations

20.

Tian, Weihua, Zilu Ye, Shengjun Wang, et al.. (2019). The glycosylation design space for recombinant lysosomal replacement enzymes produced in CHO cells. Nature Communications. 10(1). 1785–1785. 50 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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