Yuichi Kodama

2.1k total citations · 1 hit paper
25 papers, 1.3k citations indexed

About

Yuichi Kodama is a scholar working on Molecular Biology, Ecology and Plant Science. According to data from OpenAlex, Yuichi Kodama has authored 25 papers receiving a total of 1.3k indexed citations (citations by other indexed papers that have themselves been cited), including 22 papers in Molecular Biology, 6 papers in Ecology and 5 papers in Plant Science. Recurrent topics in Yuichi Kodama's work include Genomics and Phylogenetic Studies (16 papers), Gene expression and cancer classification (11 papers) and Microbial Community Ecology and Physiology (5 papers). Yuichi Kodama is often cited by papers focused on Genomics and Phylogenetic Studies (16 papers), Gene expression and cancer classification (11 papers) and Microbial Community Ecology and Physiology (5 papers). Yuichi Kodama collaborates with scholars based in Japan, United Kingdom and United States. Yuichi Kodama's co-authors include Martin Shumway, Rasko Leinonen, Jun Mashima, Osamu Ogasawara, Yasukazu Nakamura, Eli Kaminuma, Kousaku Okubo, Takehide Kosuge, Takatomo Fujisawa and Toshihisa Takagi and has published in prestigious journals such as Nucleic Acids Research, Plant and Cell Physiology and Advances in experimental medicine and biology.

In The Last Decade

Yuichi Kodama

25 papers receiving 1.3k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

The sequence read archive: explosive growth of sequencing data

2011 641 citations Yuichi Kodama, Martin Shumway et al. Nucleic Acids Research profile →

Peers

Yuichi Kodama

MB

ECOLO

PS

CR

GENET

Greg Von Kuster Germany

Nitesh Turaga United States

Carl Eberhard United States

Bernard J. Pope Australia

Toshiaki Katayama Japan

Mary Mangan United States

Stephan Pabinger Austria

W. James Kent United States

Frédéric Lemoine France

Andrew Yates United Kingdom

Greg Von Kuster Germany

Yuichi Kodama

905 ×0.9

MB

179 ×0.9

ECOLO

226 ×1.2

PS

106 ×0.7

CR

185 ×1.2

GENET

Citations per year, relative to Yuichi Kodama Yuichi Kodama (= 1×) peers Greg Von Kuster

Countries citing papers authored by Yuichi Kodama

Since Specialization

Citations

This map shows the geographic impact of Yuichi Kodama's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Yuichi Kodama with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Yuichi Kodama more than expected).

Fields of papers citing papers by Yuichi Kodama

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Yuichi Kodama. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Yuichi Kodama. The network helps show where Yuichi Kodama may publish in the future.

Co-authorship network of co-authors of Yuichi Kodama

This figure shows the co-authorship network connecting the top 25 collaborators of Yuichi Kodama. A scholar is included among the top collaborators of Yuichi Kodama based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Yuichi Kodama. Yuichi Kodama is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

1.

Ara, Takeshi, Yuichi Kodama, Toshiaki Tokimatsu, et al.. (2023). DDBJ update in 2023: the MetaboBank for metabolomics data and associated metadata. Nucleic Acids Research. 52(D1). D67–D71. 9 indexed citations

2.

Hachiya, Tsuyoshi, Yosuke Kawai, Seik‐Soon Khor, et al.. (2022). The NBDC-DDBJ imputation server facilitates the use of controlled access reference panel datasets in Japan. Human Genome Variation. 9(1). 48–48. 1 indexed citations

3.

Tanizawa, Yasuhiro, Takatomo Fujisawa, Yuichi Kodama, et al.. (2022). DNA Data Bank of Japan (DDBJ) update report 2022. Nucleic Acids Research. 51(D1). D101–D105. 19 indexed citations

4.

Okido, Toshihisa, Yuichi Kodama, Jun Mashima, et al.. (2021). DNA Data Bank of Japan (DDBJ) update report 2021. Nucleic Acids Research. 50(D1). D102–D105. 22 indexed citations

5.

Kodama, Yuichi, et al.. (2020). DDBJ update: streamlining submission and access of human data. Nucleic Acids Research. 49(D1). D71–D75. 38 indexed citations

6.

Kodama, Yuichi, Jun Mashima, Takehide Kosuge, et al.. (2017). DNA Data Bank of Japan: 30th anniversary. Nucleic Acids Research. 46(D1). D30–D35. 31 indexed citations

7.

Mashima, Jun, Yuichi Kodama, Takatomo Fujisawa, et al.. (2016). DNA Data Bank of Japan. Nucleic Acids Research. 45(D1). D25–D31. 55 indexed citations

8.

Mashima, Jun, Yuichi Kodama, Takehide Kosuge, et al.. (2015). DNA data bank of Japan (DDBJ) progress report. Nucleic Acids Research. 44(D1). D51–D57. 57 indexed citations

9.

Kodama, Yuichi, Jun Mashima, Takehide Kosuge, et al.. (2014). The DDBJ Japanese Genotype-phenotype Archive for genetic and phenotypic human data. Nucleic Acids Research. 43(D1). D18–D22. 47 indexed citations

10.

Federhen, Scott, Karen Clark, Tanya Barrett, et al.. (2014). Toward richer metadata for microbial sequences: replacing strain-level NCBI taxonomy taxids with BioProject, BioSample and Assembly records. Standards in Genomic Sciences. 9(3). 1275–1277. 31 indexed citations

11.

Mochizuki, Takako, Yuichi Kodama, Hideaki Sugawara, et al.. (2013). DDBJ Read Annotation Pipeline: A Cloud Computing-Based Pipeline for High-Throughput Analysis of Next-Generation Sequencing Data. DNA Research. 20(4). 383–390. 57 indexed citations

12.

Kosuge, Takehide, Jun Mashima, Yuichi Kodama, et al.. (2013). DDBJ progress report: a new submission system for leading to a correct annotation. Nucleic Acids Research. 42(D1). D44–D49. 29 indexed citations

13.

Ogasawara, Osamu, Jun Mashima, Yuichi Kodama, et al.. (2012). DDBJ new system and service refactoring. Nucleic Acids Research. 41(D1). D25–D29. 24 indexed citations

14.

Kodama, Yuichi, Jun Mashima, Eli Kaminuma, et al.. (2011). The DNA Data Bank of Japan launches a new resource, the DDBJ Omics Archive of functional genomics experiments. Nucleic Acids Research. 40(D1). D38–D42. 32 indexed citations

15.

Kodama, Yuichi, Martin Shumway, & Rasko Leinonen. (2011). The sequence read archive: explosive growth of sequencing data. Nucleic Acids Research. 40(D1). D54–D56. 641 indexed citations breakdown →

16.

Kodama, Yuichi, Eli Kaminuma, Kazuho Ikeo, et al.. (2010). Biological Databases at DNA Data Bank of Japan in the Era of Next-Generation Sequencing Technologies. Advances in experimental medicine and biology. 680. 125–135. 10 indexed citations

17.

Kaminuma, Eli, Takehide Kosuge, Yuichi Kodama, et al.. (2010). DDBJ progress report. Nucleic Acids Research. 39(Database). D22–D27. 31 indexed citations

18.

Kodama, Yuichi, et al.. (2009). Determination of the in vivo distribution of nuclear matrix attachment regions using a polymerase chain reaction-based assay in Arabidopsis thaliana. Journal of Bioscience and Bioengineering. 108(1). 11–19. 5 indexed citations

19.

Kaminuma, Eli, Jun Mashima, Yuichi Kodama, et al.. (2009). DDBJ launches a new archive database with analytical tools for next-generation sequence data. Nucleic Acids Research. 38(suppl_1). D33–D38. 67 indexed citations

20.

Kodama, Yuichi, Shingo Nagaya, Atsuhiko Shinmyō, & Ko Kato. (2007). Mapping and Characterization of DNase I Hypersensitive Sites in Arabidopsis Chromatin. Plant and Cell Physiology. 48(3). 459–470. 34 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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