Tomohiro Shimada

4.1k total citations
81 papers, 3.2k citations indexed

About

Tomohiro Shimada is a scholar working on Molecular Biology, Genetics and Ecology. According to data from OpenAlex, Tomohiro Shimada has authored 81 papers receiving a total of 3.2k indexed citations (citations by other indexed papers that have themselves been cited), including 58 papers in Molecular Biology, 54 papers in Genetics and 18 papers in Ecology. Recurrent topics in Tomohiro Shimada's work include Bacterial Genetics and Biotechnology (54 papers), RNA and protein synthesis mechanisms (35 papers) and Bacteriophages and microbial interactions (18 papers). Tomohiro Shimada is often cited by papers focused on Bacterial Genetics and Biotechnology (54 papers), RNA and protein synthesis mechanisms (35 papers) and Bacteriophages and microbial interactions (18 papers). Tomohiro Shimada collaborates with scholars based in Japan, India and United Kingdom. Tomohiro Shimada's co-authors include Akira Ishihama, Yoshinori Yamamoto, Kaneyoshi Yamamoto, Nobuyuki Fujita, Kan Tanaka, Itaru Nakamura, Michihisa Maeda, Atsunori Mori, Yukiko Yamazaki and Ayako Kori and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Journal of the American Chemical Society and Nucleic Acids Research.

In The Last Decade

Tomohiro Shimada

74 papers receiving 3.2k citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Tomohiro Shimada Japan 31 1.9k 1.3k 855 441 298 81 3.2k
Albert Bolhuis United Kingdom 35 2.9k 1.6× 1.9k 1.5× 342 0.4× 1.2k 2.8× 442 1.5× 75 4.5k
Ahmed Bouhss France 33 2.5k 1.4× 1.2k 0.9× 682 0.8× 646 1.5× 311 1.0× 78 3.4k
Ronald W. Woodard United States 32 1.8k 1.0× 412 0.3× 910 1.1× 157 0.4× 536 1.8× 115 3.0k
Mark S. B. Paget United Kingdom 25 2.2k 1.2× 1.0k 0.8× 150 0.2× 438 1.0× 231 0.8× 27 3.0k
Christopher T. Walsh United States 26 1.6k 0.9× 382 0.3× 371 0.4× 127 0.3× 259 0.9× 32 2.7k
Tino Polen Germany 29 2.3k 1.2× 889 0.7× 129 0.2× 339 0.8× 277 0.9× 79 3.1k
Amy M. Gehring United States 21 1.9k 1.0× 406 0.3× 484 0.6× 139 0.3× 145 0.5× 23 2.7k
Bingbing Sun China 24 1.9k 1.0× 498 0.4× 258 0.3× 127 0.3× 699 2.3× 47 2.9k
Thomas A. Keating United States 30 2.2k 1.2× 278 0.2× 1.9k 2.2× 94 0.2× 187 0.6× 57 4.1k
Donald R. Ronning United States 26 1.3k 0.7× 376 0.3× 345 0.4× 260 0.6× 158 0.5× 65 2.2k

Countries citing papers authored by Tomohiro Shimada

Since Specialization
Citations

This map shows the geographic impact of Tomohiro Shimada's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Tomohiro Shimada with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Tomohiro Shimada more than expected).

Fields of papers citing papers by Tomohiro Shimada

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Tomohiro Shimada. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Tomohiro Shimada. The network helps show where Tomohiro Shimada may publish in the future.

Co-authorship network of co-authors of Tomohiro Shimada

This figure shows the co-authorship network connecting the top 25 collaborators of Tomohiro Shimada. A scholar is included among the top collaborators of Tomohiro Shimada based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Tomohiro Shimada. Tomohiro Shimada is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Uchida, Hiroyuki, Kaori Ishii, Tomohiro Shimada, et al.. (2025). Estimates of minimal important change in the functional independence measure among older patients with hip fracture. Geriatric Nursing. 66(Pt C). 103706–103706.
2.
Shimada, Tomohiro. (2024). ゲノム転写制御ネットワーク解析から明らかになる微生物の仕組み. KAGAKU TO SEIBUTSU. 62(2). 56–58.
3.
Shimada, Tomohiro, et al.. (2024). Genomic SELEX Screening of Regulatory Targets of Transcription Factors. Methods in molecular biology. 2819. 77–102.
4.
Takada, Hiraku, et al.. (2023). Genomic SELEX Reveals Pervasive Role of the Flagella Master Regulator FlhDC in Carbon Metabolism. International Journal of Molecular Sciences. 24(4). 3696–3696. 3 indexed citations
5.
Taguchi, Seiichi, et al.. (2023). Cell-growth phase-dependent promoter replacement approach for improved poly(lactate-co-3-hydroxybutyrate) production in Escherichia coli. Microbial Cell Factories. 22(1). 131–131. 7 indexed citations
6.
Sharma, Mahima, Ruwan Epa, Yi Jin, et al.. (2021). Molecular Basis of Sulfosugar Selectivity in Sulfoglycolysis. ACS Central Science. 7(3). 476–487. 19 indexed citations
7.
Shimada, Tomohiro, et al.. (2021). Single-Target Regulators Constitute the Minority Group of Transcription Factors in Escherichia coli K-12. Frontiers in Microbiology. 12. 697803–697803. 14 indexed citations
8.
Ogasawara, Hiroshi, et al.. (2020). Novel regulators of the csgD gene encoding the master regulator of biofilm formation in Escherichia coli K-12. Microbiology. 166(9). 880–890. 24 indexed citations
9.
Shimizu, Takayuki, Sylwia Kacprzak, Nobuyoshi Mochizuki, et al.. (2019). The retrograde signaling protein GUN1 regulates tetrapyrrole biosynthesis. Proceedings of the National Academy of Sciences. 116(49). 24900–24906. 52 indexed citations
10.
11.
Yoshida, Hideji, Akira Wada, Tomohiro Shimada, Yasushi Maki, & Akira Ishihama. (2019). Coordinated Regulation of Rsd and RMF for Simultaneous Hibernation of Transcription Apparatus and Translation Machinery in Stationary-Phase Escherichia coli. Frontiers in Genetics. 10. 1153–1153. 13 indexed citations
12.
Shimada, Tomohiro, et al.. (2019). Regulatory Role of PlaR (YiaJ) for Plant Utilization in Escherichia coli K-12. Scientific Reports. 9(1). 20415–20415. 12 indexed citations
13.
Yoshida, Hideji, Tomohiro Shimada, & Akira Ishihama. (2018). Coordinated Hibernation of Transcriptional and Translational Apparatus during Growth Transition of Escherichia coli to Stationary Phase. mSystems. 3(5). 28 indexed citations
14.
Shimada, Tomohiro, Hiroshi Ogasawara, & Akira Ishihama. (2018). Genomic SELEX Screening of Regulatory Targets of Escherichia coli Transcription Factors. Methods in molecular biology. 1837. 49–69. 23 indexed citations
15.
Shimada, Tomohiro, Kan Tanaka, & Akira Ishihama. (2017). The whole set of the constitutive promoters recognized by four minor sigma subunits of Escherichia coli RNA polymerase. PLoS ONE. 12(6). e0179181–e0179181. 34 indexed citations
16.
Ishihama, Akira, Ayako Kori, Kayoko Yamada, et al.. (2014). Intracellular Concentrations of 65 Species of Transcription Factors with Known Regulatory Functions in Escherichia coli. Journal of Bacteriology. 196(15). 2718–2727. 70 indexed citations
17.
Shimada, Tomohiro, Nobuyuki Fujita, Kaneyoshi Yamamoto, & Akira Ishihama. (2011). Novel Roles of cAMP Receptor Protein (CRP) in Regulation of Transport and Metabolism of Carbon Sources. PLoS ONE. 6(6). e20081–e20081. 204 indexed citations
18.
Shimada, Tomohiro, Akira Ishihama, Stephen Busby, & David C. Grainger. (2008). The Escherichia coli RutR transcription factor binds at targets within genes as well as intergenic regions. Nucleic Acids Research. 36(12). 3950–3955. 126 indexed citations
19.
Chatterji, Dipankar, et al.. (2006). The role of the omega subunit of RNA polymerase in expression of therelAgene inEscherichia coli. FEMS Microbiology Letters. 267(1). 51–55. 21 indexed citations
20.
Shimada, Tomohiro, et al.. (2001). H + -ATPase defect in Corynebacterium glutamicum abolishes glutamic acid production with enhancement of glucose consumption rate. Applied Microbiology and Biotechnology. 57(4). 534–540. 59 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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