Stephan Fischer

2.9k total citations
15 papers, 327 citations indexed

About

Stephan Fischer is a scholar working on Molecular Biology, Biophysics and Neurology. According to data from OpenAlex, Stephan Fischer has authored 15 papers receiving a total of 327 indexed citations (citations by other indexed papers that have themselves been cited), including 15 papers in Molecular Biology, 5 papers in Biophysics and 4 papers in Neurology. Recurrent topics in Stephan Fischer's work include Single-cell and spatial transcriptomics (11 papers), Cell Image Analysis Techniques (5 papers) and Neuroinflammation and Neurodegeneration Mechanisms (4 papers). Stephan Fischer is often cited by papers focused on Single-cell and spatial transcriptomics (11 papers), Cell Image Analysis Techniques (5 papers) and Neuroinflammation and Neurodegeneration Mechanisms (4 papers). Stephan Fischer collaborates with scholars based in United States, France and Canada. Stephan Fischer's co-authors include Jesse Gillis, Anthony M. Zador, Xiaoyin Chen, Yu-Chi Sun, Huiqing Zhan, Justus M. Kebschull, Katherine S. Matho, Z. Josh Huang, Benjamin Harris and Megan Crow and has published in prestigious journals such as Nature, Cell and Nature Communications.

In The Last Decade

Stephan Fischer

14 papers receiving 324 citations

Peers

Countries citing papers authored by Stephan Fischer

Since Specialization

Citations

This map shows the geographic impact of Stephan Fischer's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Stephan Fischer with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Stephan Fischer more than expected).

Fields of papers citing papers by Stephan Fischer

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Stephan Fischer. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Stephan Fischer. The network helps show where Stephan Fischer may publish in the future.

Co-authorship network of co-authors of Stephan Fischer

This figure shows the co-authorship network connecting the top 25 collaborators of Stephan Fischer. A scholar is included among the top collaborators of Stephan Fischer based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Stephan Fischer. Stephan Fischer is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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15 of 15 papers shown

#	Work	Indexed citations
1	Whole-cortex in situ sequencing reveals input-dependent area identity 2024 ·Nature ·Xiaoyin Chen, Stephan Fischer, (unknown), Aixin Zhang, (unknown), Patrick O. Kanold, Jesse Gillis, Anthony M. Zador	12
2	Improving replicability in single-cell RNA-Seq cell type discovery with Dune 2024 ·BMC Bioinformatics ·Hector Roux de Bézieux, Kelly Street, Stephan Fischer, Koen Van Den Berge, Rebecca K. Chance, Davide Risso, Jesse Gillis, John Ngai, Elizabeth Purdom, Sandrine Dudoit	0
3	The transcriptional legacy of developmental stochasticity 2023 ·Nature Communications ·Sara Ballouz, Risa Karakida Kawaguchi, Maria T. Peña, Stephan Fischer, Megan Crow, Leon French, (unknown), Linda B. Adams, Jesse Gillis	4
4	Defining the extent of gene function using ROC curvature 2022 ·Bioinformatics ·Stephan Fischer, Jesse Gillis	2
5	Learning single-cell chromatin accessibility profiles using meta-analytic marker genes 2022 ·Briefings in Bioinformatics ·Risa Karakida Kawaguchi, (unknown), Stephan Fischer, (unknown), Rohit Tripathy, Peter K. Koo, Jesse Gillis	2
6	Integrating barcoded neuroanatomy with spatial transcriptional profiling enables identification of gene correlates of projections 2021 ·Nature Neuroscience ·Yu-Chi Sun, Xiaoyin Chen, Stephan Fischer, (unknown), Huiqing Zhan, Jesse Gillis, Anthony M. Zador	59
7	Assessing the replicability of spatial gene expression using atlas data from the adult mouse brain 2021 ·PLoS Biology ·(unknown), Cantin Ortiz, Daniel Fürth, Stephan Fischer, Konstantinos Meletis, Anthony M. Zador, Jesse Gillis	6
8	Single-cell co-expression analysis reveals that transcriptional modules are shared across cell types in the brain 2021 ·Cell Systems ·Benjamin Harris, Megan Crow, Stephan Fischer, Jesse Gillis	17
9	BiPSim: a flexible and generic stochastic simulator for polymerization processes 2021 ·Scientific Reports ·Stephan Fischer, (unknown), Vincent Henry, Philippe Robert, Anne Goelzer, Vincent Fromion	2
10	Scaling up reproducible research for single-cell transcriptomics using MetaNeighbor 2021 ·Nature Protocols ·Stephan Fischer, Megan Crow, Benjamin Harris, Jesse Gillis	18
11	How many markers are needed to robustly determine a cell's type? 2021 ·iScience ·Stephan Fischer, Jesse Gillis	18
12	High-Throughput Mapping of Long-Range Neuronal Projection Using In Situ Sequencing 2019 ·Cell ·Xiaoyin Chen, Yu-Chi Sun, Huiqing Zhan, Justus M. Kebschull, Stephan Fischer, Katherine S. Matho, Z. Josh Huang, Jesse Gillis, Anthony M. Zador	139
13	Copolymerization of single-cell nucleic acids into balls of acrylamide gel 2019 ·Genome Research ·Siran Li, Jude Kendall, Sarah Park, Zihua Wang, Joan Alexander, Andrea B. Moffitt, (unknown), Cassidy Danyko, Bruno Gegenhuber, Stephan Fischer, Brian D. Robinson, Herbert Lepor, Jessica Tollkühn, Jesse Gillis, Eric Brouzés, A. Krasnitz, Dan Levy, Michael Wigler	6
14	Automated generation of bacterial resource allocation models 2019 ·Metabolic Engineering ·(unknown), Stephan Fischer, (unknown), (unknown), Wolfram Liebermeister, (unknown), Laurent Tournier, Edda Klipp, Vincent Fromion, Anne Goelzer	39
15	The bacterial interlocked process ONtology (BiPON): a systemic multi-scale unified representation of biological processes in prokaryotes 2017 ·Journal of Biomedical Semantics ·Vincent Henry, Anne Goelzer, (unknown), Stephan Fischer, (unknown), Valentin Loux, Christine Froidevaux, Vincent Fromion	3

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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