Rodrigo Galindo‐Murillo

2.8k total citations · 2 hit papers
65 papers, 2.1k citations indexed

About

Rodrigo Galindo‐Murillo is a scholar working on Molecular Biology, Oncology and Organic Chemistry. According to data from OpenAlex, Rodrigo Galindo‐Murillo has authored 65 papers receiving a total of 2.1k indexed citations (citations by other indexed papers that have themselves been cited), including 48 papers in Molecular Biology, 21 papers in Oncology and 16 papers in Organic Chemistry. Recurrent topics in Rodrigo Galindo‐Murillo's work include DNA and Nucleic Acid Chemistry (34 papers), RNA and protein synthesis mechanisms (23 papers) and Metal complexes synthesis and properties (21 papers). Rodrigo Galindo‐Murillo is often cited by papers focused on DNA and Nucleic Acid Chemistry (34 papers), RNA and protein synthesis mechanisms (23 papers) and Metal complexes synthesis and properties (21 papers). Rodrigo Galindo‐Murillo collaborates with scholars based in United States, Mexico and Colombia. Rodrigo Galindo‐Murillo's co-authors include Thomas E. Cheatham, Marie Zgarbová, Jiřı́ Šponer, Petr Jurečka, Michal Otyepka, Lena Ruíz-Azuara, Fernando Cortés‐Guzmán, Daniel R. Roe, J.C. Robertson and Juan Carlos García‐Ramos and has published in prestigious journals such as Journal of the American Chemical Society, Nucleic Acids Research and Nature Communications.

In The Last Decade

Rodrigo Galindo‐Murillo

62 papers receiving 2.0k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Refinement of the Sugar–Phosphate Backbone Torsion Beta for AMBER Force Fields Improves the Description of Z- and B-DNA

2015 401 citations Marie Zgarbová, Jiřı́ Šponer et al. Journal of Chemical Theory and Computation profile →
Assessing the Current State of Amber Force Field Modifications for DNA

2016 397 citations Rodrigo Galindo‐Murillo, Marie Zgarbová et al. Journal of Chemical Theory and Computation profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Rodrigo Galindo‐Murillo United States	21	1.5k	431	406	221	162	65	2.1k
Keith Rickert United States	23	1.0k 0.7×	218 0.5×	475 1.2×	174 0.8×	52 0.3×	40	1.8k
Ihtshamul Haq United Kingdom	22	1.9k 1.3×	903 2.1×	691 1.7×	258 1.2×	86 0.5×	26	2.7k
James M. Veal United States	24	1.7k 1.1×	415 1.0×	524 1.3×	138 0.6×	89 0.5×	36	2.4k
Tam Huynh‐Dinh France	24	1.5k 1.0×	245 0.6×	619 1.5×	146 0.7×	103 0.6×	60	2.0k
Franz‐Josef Meyer‐Almes Germany	26	1.7k 1.1×	502 1.2×	725 1.8×	234 1.1×	26 0.2×	88	2.6k
John Spurlino United States	24	1.6k 1.1×	538 1.2×	432 1.1×	707 3.2×	115 0.7×	42	2.8k
Giulia Palermo United States	32	2.3k 1.6×	232 0.5×	211 0.5×	349 1.6×	57 0.4×	89	3.0k
Chris A. Broka United States	24	2.4k 1.6×	519 1.2×	1.1k 2.7×	251 1.1×	198 1.2×	31	3.5k
David Aragão Australia	19	1.4k 1.0×	164 0.4×	214 0.5×	441 2.0×	44 0.3×	39	2.1k
Stephen F. Betz United States	24	2.6k 1.8×	325 0.8×	291 0.7×	616 2.8×	41 0.3×	58	3.1k

Countries citing papers authored by Rodrigo Galindo‐Murillo

Since Specialization

Citations

This map shows the geographic impact of Rodrigo Galindo‐Murillo's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Rodrigo Galindo‐Murillo with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Rodrigo Galindo‐Murillo more than expected).

Fields of papers citing papers by Rodrigo Galindo‐Murillo

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Rodrigo Galindo‐Murillo. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Rodrigo Galindo‐Murillo. The network helps show where Rodrigo Galindo‐Murillo may publish in the future.

Co-authorship network of co-authors of Rodrigo Galindo‐Murillo

This figure shows the co-authorship network connecting the top 25 collaborators of Rodrigo Galindo‐Murillo. A scholar is included among the top collaborators of Rodrigo Galindo‐Murillo based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Rodrigo Galindo‐Murillo. Rodrigo Galindo‐Murillo is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Galindo‐Murillo, Rodrigo, et al.. (2024). modXNA: A Modular Approach to Parametrization of Modified Nucleic Acids for Use with Amber Force Fields. Journal of Chemical Theory and Computation. 20(21). 9354–9363. 4 indexed citations

Galindo‐Murillo, Rodrigo, Jack S. Cohen, & Barak Akabayov. (2024). Comparative molecular dynamics calculations of duplexation of chemically modified analogs of DNA used for antisense applications. NAR Genomics and Bioinformatics. 6(4). lqae155–lqae155.

Galindo‐Murillo, Rodrigo, et al.. (2024). Molecular dynamics of structural effects of reactive carbonyl species derivate of lipid peroxidation on bovine serum albumin. Biochimica et Biophysica Acta (BBA) - General Subjects. 1868(6). 130613–130613. 3 indexed citations

Winkler, Lauren, Rodrigo Galindo‐Murillo, & Thomas E. Cheatham. (2023). Structures and Dynamics of DNA Mini-Dumbbells Are Force Field Dependent. Journal of Chemical Theory and Computation. 19(8). 2198–2212. 9 indexed citations

Galindo‐Murillo, Rodrigo, et al.. (2023). Cysteine carbonylation with reactive carbonyl species from lipid peroxidation induce local structural changes on thioredoxin active site. Journal of Molecular Graphics and Modelling. 124. 108533–108533. 4 indexed citations

Galindo‐Murillo, Rodrigo, et al.. (2023). DNA recognition site of anticancer tinidazole copper(ii) complexes. Dalton Transactions. 52(7). 2087–2097. 6 indexed citations

Galindo‐Murillo, Rodrigo, Jack S. Cohen, & Barak Akabayov. (2020). Molecular dynamics simulations of acyclic analogs of nucleic acids for antisense inhibition. Molecular Therapy — Nucleic Acids. 23. 527–535. 3 indexed citations

Trigos, Ángel, et al.. (2020). Elucidating Molecular Interactions of Ten Natural Compounds Targeting E6 HPV High Risk Oncoproteins Using Microsecond Molecular Dynamics Simulations. Medicinal Chemistry. 17(6). 587–600. 3 indexed citations

Galindo‐Murillo, Rodrigo & Thomas E. Cheatham. (2019). Lessons learned in atomistic simulation of double-stranded DNA: Solvation and salt concerns [Article v1.0]. PubMed. 1(2). 9974–9974. 11 indexed citations

10.

Galindo‐Murillo, Rodrigo, et al.. (2018). Development and benchmark to obtain AMBER parameters dataset for non-standard amino acids modified with 4-hydroxy-2-nonenal. Data in Brief. 21. 2581–2589. 8 indexed citations

11.

Galindo‐Murillo, Rodrigo, et al.. (2018). 4-HNE carbonylation induces local conformational changes on bovine serum albumin and thioredoxin. A molecular dynamics study. Journal of Molecular Graphics and Modelling. 86. 298–307. 22 indexed citations

12.

Flores‐Álamo, Marcos, et al.. (2017). Effect of tunable redox behavior of bis chelate substituted 1,10-phenantroline Cu(II) complexes on its reaction with superoxide anion in DMSO. Toward a simple criterion to identify a SOD-like mechanism. Journal of Inorganic Biochemistry. 175. 118–128. 8 indexed citations

13.

Zgarbová, Marie, Jiřı́ Šponer, Michal Otyepka, et al.. (2015). Refinement of the Sugar–Phosphate Backbone Torsion Beta for AMBER Force Fields Improves the Description of Z- and B-DNA. Journal of Chemical Theory and Computation. 11(12). 5723–5736. 401 indexed citations breakdown →

14.

Galindo‐Murillo, Rodrigo, Juan Carlos García‐Ramos, Lena Ruíz-Azuara, Thomas E. Cheatham, & Fernando Cortés‐Guzmán. (2015). Intercalation processes of copper complexes in DNA. Nucleic Acids Research. 43(11). 5364–5376. 151 indexed citations

15.

Galindo‐Murillo, Rodrigo, Daniel R. Roe, & Thomas E. Cheatham. (2014). Convergence and reproducibility in molecular dynamics simulations of the DNA duplex d(GCACGAACGAACGAACGC). Biochimica et Biophysica Acta (BBA) - General Subjects. 1850(5). 1041–1058. 136 indexed citations

16.

García‐Ramos, Juan Carlos, Rodrigo Galindo‐Murillo, Virginia Gómez‐Vidales, et al.. (2014). The π‐Back‐Bonding Modulation and Its Impact in the Electronic Properties of Cu^II Antineoplastic Compounds: An Experimental and Theoretical Study. Chemistry - A European Journal. 20(42). 13730–13741. 39 indexed citations

17.

Uribe-Figueroa, Laura, et al.. (2013). Whole Genome Gene Expression Analysis Reveals Casiopeína-Induced Apoptosis Pathways. PLoS ONE. 8(1). e54664–e54664. 35 indexed citations

18.

Galindo‐Murillo, Rodrigo, Christina Bergonzo, & Thomas E. Cheatham. (2013). Molecular Modeling of Nucleic Acid Structure. Current Protocols in Nucleic Acid Chemistry. 54(1). 7.5.1–7.5.13. 9 indexed citations

19.

Galindo‐Murillo, Rodrigo, Lena Ruíz-Azuara, Rafael Moreno‐Esparza, & Fernando Cortés‐Guzmán. (2012). Molecular recognition between DNA and a copper-based anticancer complex. Physical Chemistry Chemical Physics. 14(44). 15539–15539. 51 indexed citations

20.

Galindo‐Murillo, Rodrigo, et al.. (2011). π-Stacking between Casiopeinas® and DNA bases. Physical Chemistry Chemical Physics. 13(32). 14510–14510. 34 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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