Paweł Siedlecki

3.2k total citations · 1 hit paper
36 papers, 2.0k citations indexed

About

Paweł Siedlecki is a scholar working on Molecular Biology, Computational Theory and Mathematics and Food Science. According to data from OpenAlex, Paweł Siedlecki has authored 36 papers receiving a total of 2.0k indexed citations (citations by other indexed papers that have themselves been cited), including 26 papers in Molecular Biology, 9 papers in Computational Theory and Mathematics and 6 papers in Food Science. Recurrent topics in Paweł Siedlecki's work include Computational Drug Discovery Methods (9 papers), Probiotics and Fermented Foods (6 papers) and Protein Structure and Dynamics (5 papers). Paweł Siedlecki is often cited by papers focused on Computational Drug Discovery Methods (9 papers), Probiotics and Fermented Foods (6 papers) and Protein Structure and Dynamics (5 papers). Paweł Siedlecki collaborates with scholars based in Poland, Germany and United States. Paweł Siedlecki's co-authors include Piotr Zielenkiewicz, Marta M. Stepniewska-Dziubinska, Maciej Wójcikowski, Pedro J. Ballester, Frank Lyko, Bodo Brueckner, Regine García Boy, Sándor Suhai, Tanja Musch and Manfred Wießler and has published in prestigious journals such as Journal of Biological Chemistry, Bioinformatics and PLoS ONE.

In The Last Decade

Paweł Siedlecki

35 papers receiving 2.0k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Development and evaluation of a deep learning model for protein–ligand binding affinity prediction

2018 418 citations Marta M. Stepniewska-Dziubinska, Piotr Zielenkiewicz et al. Bioinformatics profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Paweł Siedlecki Poland	17	1.6k	910	340	144	126	36	2.0k
Prudence Mutowo United Kingdom	6	1.5k 0.9×	1.2k 1.3×	324 1.0×	278 1.9×	118 0.9×	7	2.2k
Keehyoung Joo South Korea	19	1.6k 1.0×	243 0.3×	480 1.4×	81 0.6×	179 1.4×	49	2.2k
Daniel Kühn Germany	13	1.3k 0.8×	763 0.8×	280 0.8×	250 1.7×	58 0.5×	28	1.9k
Kai Zhu United States	18	1.5k 0.9×	622 0.7×	260 0.8×	182 1.3×	81 0.6×	29	2.2k
Joseph Dundas United States	4	1.1k 0.7×	271 0.3×	242 0.7×	127 0.9×	120 1.0×	6	1.6k
Miha Škalič Spain	9	1.1k 0.7×	844 0.9×	445 1.3×	98 0.7×	34 0.3×	11	1.4k
Andrew Binkowski United States	4	1.2k 0.8×	260 0.3×	226 0.7×	152 1.1×	180 1.4×	4	1.8k
David Hoksza Czechia	15	811 0.5×	407 0.4×	125 0.4×	67 0.5×	80 0.6×	55	1.2k
Shan Chang China	21	1.1k 0.7×	374 0.4×	135 0.4×	58 0.4×	203 1.6×	92	1.6k

Countries citing papers authored by Paweł Siedlecki

Since Specialization

Citations

This map shows the geographic impact of Paweł Siedlecki's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Paweł Siedlecki with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Paweł Siedlecki more than expected).

Fields of papers citing papers by Paweł Siedlecki

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Paweł Siedlecki. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Paweł Siedlecki. The network helps show where Paweł Siedlecki may publish in the future.

Co-authorship network of co-authors of Paweł Siedlecki

This figure shows the co-authorship network connecting the top 25 collaborators of Paweł Siedlecki. A scholar is included among the top collaborators of Paweł Siedlecki based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Paweł Siedlecki. Paweł Siedlecki is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Tomecki, Rafał, et al.. (2024). The strain-dependent cytostatic activity of Lactococcus lactis on CRC cell lines is mediated through the release of arginine deiminase. Microbial Cell Factories. 23(1). 82–82. 5 indexed citations

Kowalczyk, Magdalena, et al.. (2024). Screening for probiotic properties and potential immunogenic effects of lactobacilli strains isolated from various food products. Frontiers in Microbiology. 15. 1430582–1430582. 5 indexed citations

Siedlecki, Paweł, et al.. (2024). Genetic characterization of Neisseria meningitidis isolates recovered from patients with invasive meningococcal disease in Lithuania. Frontiers in Cellular and Infection Microbiology. 14. 1432197–1432197. 1 indexed citations

Graczyk, Damian, et al.. (2021). Molecular and Cellular Mechanisms Influenced by Postbiotics. International Journal of Molecular Sciences. 22(24). 13475–13475. 64 indexed citations

Bakuła, Zofia, et al.. (2021). A first insight into the genome of Prototheca wickerhamii, a major causative agent of human protothecosis. BMC Genomics. 22(1). 168–168. 16 indexed citations

Mieczkowski, Adam, Tomasz Frączyk, Mateusz Psurski, et al.. (2020). Design and in Vitro Characterization of Tricyclic Benzodiazepine Derivatives as Potent and Selective Antileukemic Agents. Chemistry & Biodiversity. 18(1). e2000733–e2000733. 4 indexed citations

Stepniewska-Dziubinska, Marta M., Piotr Zielenkiewicz, & Paweł Siedlecki. (2020). Improving detection of protein-ligand binding sites with 3D segmentation. Scientific Reports. 10(1). 5035–5035. 81 indexed citations

Bakuła, Zofia, Robert Gromadka, Jan Gawor, et al.. (2020). Sequencing and Analysis of the Complete Organellar Genomes of Prototheca wickerhamii. Frontiers in Plant Science. 11. 1296–1296. 6 indexed citations

Wójcikowski, Maciej, Paweł Siedlecki, & Pedro J. Ballester. (2019). Building Machine-Learning Scoring Functions for Structure-Based Prediction of Intermolecular Binding Affinity. Methods in molecular biology. 2053. 1–12. 29 indexed citations

10.

Wójcikowski, Maciej, et al.. (2018). Development of a protein–ligand extended connectivity (PLEC) fingerprint and its application for binding affinity predictions. Bioinformatics. 35(8). 1334–1341. 112 indexed citations

11.

Bajor, Małgorzata, Agnieszka Graczyk‐Jarzynka, Angelika Muchowicz, et al.. (2018). Targeting peroxiredoxin 1 impairs growth of breast cancer cells and potently sensitises these cells to prooxidant agents. British Journal of Cancer. 119(7). 873–884. 54 indexed citations

12.

Stepniewska-Dziubinska, Marta M., Piotr Zielenkiewicz, & Paweł Siedlecki. (2017). Pafnucy - A deep neural network for structure-based drug discovery.. arXiv (Cornell University). 2 indexed citations

13.

Wójcikowski, Maciej, Piotr Zielenkiewicz, & Paweł Siedlecki. (2015). Open Drug Discovery Toolkit (ODDT): a new open-source player in the drug discovery field. Journal of Cheminformatics. 7(1). 26–26. 142 indexed citations

14.

Pająk, Beata, Paweł Siedlecki, Marcin Niemcewicz, et al.. (2014). Genetic diversity of hemagglutinin gene of A(H1N1)pdm09 influenza strains isolated in Taiwan and its potential impact on HA-neutralizing epitope interaction. Human Vaccines & Immunotherapeutics. 10(3). 577–585. 3 indexed citations

15.

Wójcikowski, Maciej, Piotr Zielenkiewicz, & Paweł Siedlecki. (2013). DiSCuS: An Open Platform for (Not Only) Virtual Screening Results Management. Journal of Chemical Information and Modeling. 54(1). 347–354. 5 indexed citations

16.

Komorowska, B., Paweł Siedlecki, Szymon Kaczanowski, Beata Hasiów‐Jaroszewska, & Tadeusz Malinowski. (2011). Sequence diversity and potential recombination events in the coat protein gene of Apple stem pitting virus. Virus Research. 158(1-2). 263–267. 23 indexed citations

17.

Kaczanowski, Szymon, Paweł Siedlecki, & Piotr Zielenkiewicz. (2009). The High Throughput Sequence Annotation Service (HT-SAS) – the shortcut from sequence to true Medline words. BMC Bioinformatics. 10(1). 148–148. 5 indexed citations

18.

Siedlecki, Paweł, et al.. (2008). e-LiSe—an online tool for finding needles in the ‘(Medline) haystack’. Bioinformatics. 24(8). 1115–1117. 12 indexed citations

19.

Sikora, Jacek, Paweł Siedlecki, Maria Bucholc, et al.. (2006). Nicotiana tabacum Osmotic Stress-activated Kinase Is Regulated by Phosphorylation on Ser-154 and Ser-158 in the Kinase Activation Loop. Journal of Biological Chemistry. 281(45). 34299–34311. 41 indexed citations

20.

Schirrmacher, Esther, Bodo Brueckner, Frank W. Schmitges, et al.. (2006). Synthesis and in Vitro Evaluation of Biotinylated RG108: A High Affinity Compound for Studying Binding Interactions with Human DNA Methyltransferases. Bioconjugate Chemistry. 17(2). 261–266. 39 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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