Patrick J. Biggs

12.3k total citations · 2 hit papers
162 papers, 5.0k citations indexed

About

Patrick J. Biggs is a scholar working on Molecular Biology, Food Science and Ecology. According to data from OpenAlex, Patrick J. Biggs has authored 162 papers receiving a total of 5.0k indexed citations (citations by other indexed papers that have themselves been cited), including 67 papers in Molecular Biology, 44 papers in Food Science and 35 papers in Ecology. Recurrent topics in Patrick J. Biggs's work include Salmonella and Campylobacter epidemiology (39 papers), Genomics and Phylogenetic Studies (33 papers) and Bacteriophages and microbial interactions (21 papers). Patrick J. Biggs is often cited by papers focused on Salmonella and Campylobacter epidemiology (39 papers), Genomics and Phylogenetic Studies (33 papers) and Bacteriophages and microbial interactions (21 papers). Patrick J. Biggs collaborates with scholars based in New Zealand, United Kingdom and United States. Patrick J. Biggs's co-authors include Murray P. Cox, Daniel A. Peterson, Allan Bradley, Tony Cox, Nigel French, Vivek Iyer, Jessica Severin, Jennifer Harrow, A. Francis Stewart and Anthony P. West and has published in prestigious journals such as Nature, Nature Genetics and SHILAP Revista de lepidopterología.

In The Last Decade

Patrick J. Biggs

154 papers receiving 5.0k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

A conditional knockout resource for the genome-wide study of mouse gene function

2011 1.2k citations Patrick J. Biggs et al. profile →
SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data

2010 1.1k citations Murray P. Cox, Patrick J. Biggs et al. profile →

Peers

Countries citing papers authored by Patrick J. Biggs

Since Specialization

Citations

This map shows the geographic impact of Patrick J. Biggs's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Patrick J. Biggs with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Patrick J. Biggs more than expected).

Fields of papers citing papers by Patrick J. Biggs

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Patrick J. Biggs. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Patrick J. Biggs. The network helps show where Patrick J. Biggs may publish in the future.

Co-authorship network of co-authors of Patrick J. Biggs

This figure shows the co-authorship network connecting the top 25 collaborators of Patrick J. Biggs. A scholar is included among the top collaborators of Patrick J. Biggs based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Patrick J. Biggs. Patrick J. Biggs is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Escherichia Species Diversity Across Pristine and Impacted Catchments: Evidence for Avian Sources of Escherichia marmotae in Aotearoa/New Zealand 2026 ·Environmental Microbiology Reports ·Adrian L. Cookson, (unknown), (unknown), Patrick J. Biggs, Lynn Rogers, (unknown), Megan Devane, Rebecca Stott, Richard Muirhead	0
2	Temporal reconstruction of a Salmonella Enteritidis ST11 outbreak in New Zealand 2025 ·Microbial Genomics ·(unknown), (unknown), Collette Bromhead, David Welch, Ernest Williams, (unknown), Joep de Ligt, Patrick J. Biggs, Shevaun Paine, Sarah Jefferies, Nigel French	0
3	Lost in the Forest: Encoding categorical variables and the absent levels problem 2024 ·Data Mining and Knowledge Discovery ·Helen Smith, Patrick J. Biggs, Nigel French, Adam N. H. Smith, Jonathan C. Marshall	3
4	Assessing antimicrobial resistance in pasture-based dairy farms: a 15-month surveillance study in New Zealand 2024 ·Applied and Environmental Microbiology ·(unknown), Patrick J. Biggs, Sara A. Burgess, Anne C. Midwinter, Jinxin Liu, Gale Brightwell, Adrian L. Cookson	1
5	Draft genome sequences of Escherichia spp. isolates from New Zealand environmental sources 2024 ·Microbiology Resource Announcements ·Patrick J. Biggs, Marie Moinet, Lynn Rogers, Megan Devane, Richard Muirhead, Rebecca Stott, (unknown), Adrian L. Cookson	1
6	Impact of land-use and fecal contamination on Escherichia populations in environmental samples 2024 ·Scientific Reports ·Adrian L. Cookson, Jonathan C. Marshall, Patrick J. Biggs, Lynn Rogers, (unknown), Megan Devane, Rebecca Stott, Gale Brightwell	0
7	Transcriptomic and proteomic changes associated with cobalamin-dependent propionate production by the rumen bacterium Xylanibacter ruminicola 2024 ·mSystems ·(unknown), Nikola Palevich, Dragana Gagić, Patrick J. Biggs, (unknown), Ianina Altshuler, Phillip B. Pope, Graeme T. Attwood, Christina D. Moon	2
8	Aristaeella hokkaidonensis gen. nov. sp. nov. and Aristaeella lactis sp. nov., two rumen bacterial species of a novel proposed family, Aristaeellaceae fam. nov. 2023 ·INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY ·(unknown), Nikola Palevich, Samantha Joan Noel, Dragana Gagić, Patrick J. Biggs, Priya Soni, (unknown), Satoshi Koike, Yasuo Kobayashi, Peter H. Janssen, Graeme T. Attwood, Christina D. Moon	5
9	Pangenome graphs in infectious disease: a comprehensive genetic variation analysis of Neisseria meningitidis leveraging Oxford Nanopore long reads 2023 ·Frontiers in Genetics ·Zuyu Yang, Andrea Guarracino, Patrick J. Biggs, Michael A. Black, (unknown), (unknown), Tony R. Merriman, Pjotr Prins, Erik Garrison, Joep de Ligt	13
10	RNAseq Analysis of Brown Adipose Tissue and Thyroid of Newborn Lambs Subjected to Short-Term Cold Exposure Reveals Signs of Early Whitening of Adipose Tissue 2022 ·Metabolites ·(unknown), V.S.R. Dukkipati, P. R. Kenyon, H. T. Blair, N. López‐Villalobos, Kristene Gedye, Patrick J. Biggs	3
11	Mass Spectrometry-Based Lipidomics of Brown Adipose Tissue and Plasma of New-Born Lambs Subjected to Short-Term Cold Exposure 2022 ·Animals ·(unknown), V.S.R. Dukkipati, Patrick J. Biggs, P. R. Kenyon, H. T. Blair, N. López‐Villalobos, Alastair B. Ross	2
12	An insight into tropical milk microbiome: Bacterial community composition of cattle milk produced in Sri Lanka 2021 ·International Dairy Journal ·(unknown), (unknown), Patrick J. Biggs, (unknown), C. M. Nanayakkara, Saumya Wickramasinghe, (unknown), (unknown)	4
13	Microbial diversity in water and animal faeces: a metagenomic analysis to assess public health risk 2020 ·New Zealand Journal of Zoology ·(unknown), David T. S. Hayman, Patrick J. Biggs, Nigel French, Juan C. García–R	6
14	Phylogeography of the endemic New Zealand tree Entelea arborescens (whau; Malvaceae) 2019 ·New Zealand Journal of Botany ·Lara D. Shepherd, (unknown), Patrick J. Biggs, Peter J. de Lange	2
15	Complete Genome Sequence of Campylobacter concisus ATCC 33237 ^T and Draft Genome Sequences for an Additional Eight Well-Characterized C. concisus Strains 2017 ·Genome Announcements ·Angela J. Cornelius, William G. Miller, Albert J. Lastovica, Stephen L. W. On, Nigel French, Olivier Vandenberg, Patrick J. Biggs	9
16	Inferring Ancestral Recombination Graphs from Bacterial Genomic Data 2016 ·Genetics ·Timothy G. Vaughan, David Welch, Alexei J. Drummond, Patrick J. Biggs, (unknown), Nigel French	30
17	Variation in the limit-of-detection of the ProSpecT Campylobacter microplate enzyme immunoassay in stools spiked with emerging Campylobacter species 2016 ·Journal of Microbiological Methods ·Krunoslav Bojanić, Anne C. Midwinter, Jonathan C. Marshall, Lynn Rogers, Patrick J. Biggs, Els Acke	5
18	Sticky Genomes: Using NGS Evidence to Test Hybrid Speciation Hypotheses 2016 ·PLoS ONE ·Mary Morgan‐Richards, Simon F. K. Hills, Patrick J. Biggs, Steven A. Trewick	10
19	Semi-automatic selection of summary statistics for ABC model choice 2013 ·Statistical Applications in Genetics and Molecular Biology ·Dennis Prangle, Paul Fearnhead, Murray P. Cox, Patrick J. Biggs, Nigel French	37
20	Index-Free De Novo Assembly and Deconvolution of Mixed Mitochondrial Genomes 2010 ·Genome Biology and Evolution ·Bennet J. McComish, Simon F. K. Hills, Patrick J. Biggs, David Penny	23

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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