Patricia P. Chan

11.7k citations

29 papers · 6.1k indexed · 5 hit papers · h-index 16

Molecular Biology top 1%
- RNA modifications and cancer 18
- Genomics and Phylogenetic Studies 17
- RNA and protein synthesis mechanisms 16
- RNA Research and Splicing 5
- Glycosylation and Glycoproteins Research 1
Ecology top 1%
- Bacteriophages and microbial interactions 3
- Microbial Community Ecology and Physiology 2
Endocrinology top 2%
Microbiology top 2%
Plant Science top 2%
Cancer Research
- Cancer-related molecular mechanisms research 2

Co-authors: Todd M. Lowe Allysia J. Mak Aaron E. Cozen Anna Coenen Andrew M. Smith Jay B. Martin Doug Markant Todd M. Gureckis
Cited by: Molecular Biology Ecology Endocrinology
Journals: Proceedings of the National Academy of Sciences (1 paper)Nucleic Acids Research (8 papers)Nature Communications (1 paper)
Partner nations: United States United Kingdom Germany

In The Last Decade

Patricia P. Chan

29 papers receiving 6.0k citations

Hit Papers

5 papers align trajectories log scale

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

2021 Nucleic Acids Research
2019 Methods in molecular biology
2016 Nucleic Acids Research
2015 Nucleic Acids Research
2008 Nucleic Acids Research

Peers

Countries citing papers authored by Patricia P. Chan

Since Specialization

Citations

This map shows the geographic impact of Patricia P. Chan's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Patricia P. Chan with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Patricia P. Chan more than expected).

Fields of papers citing papers by Patricia P. Chan

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Patricia P. Chan. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Patricia P. Chan. The network helps show where Patricia P. Chan may publish in the future.

Co-authorship network

The 25 scholars most cited alongside Patricia P. Chan, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Patricia P. Chan Line = papers co-authored together Patricia P. Chan links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	High-fidelity and differential nonsense suppression in live cells and a frontotemporal dementia allele with human transfer RNAs Nucleic Acids Research ·Aruun Beharry,Cian Ward,Henry Moore,Kyle Hoffman,Patricia P. Chan,Todd M. Lowe,Patrick O’Donoghue	2025	1
2	Analyzing, visualizing, and annotating tRNA-derived RNAs using tRAX and tDRnamer Methods in enzymology on CD-ROM/Methods in enzymology ·Patricia P. Chan,Andrew Holmes,Todd M. Lowe	2025	1
3	Human TRMT1 and TRMT1L paralogs ensure the proper modification state, stability, and function of tRNAs Cell Reports ·Kejia Zhang,Aidan C. Manning,Jenna M. Lentini,Jonathan C. Howard,Felix Dalwigk,Reza Maroofian,Stéphanie Efthymiou,Patricia P. Chan,Sergei I. Eliseev,Zi Yang,Hayley Chang,Ehsan Ghayoor Karimiani,Behnoosh Bakhshoodeh,Henry Houlden,Stefanie Kaiser,Todd M. Lowe,Dragony Fu	2025	5
4	Balancing read length and sequencing depth: Optimizing Nanopore long‐read sequencing for monocots with an emphasis on the Liliales Applications in Plant Sciences ·Gisel Y. De La Cerda,Jacob B. Landis,Evan Eifler,Adriana I. Hernández,Fay‐Wei Li,Jing Zhang,Carrie M. Tribble,Nisa Karimi,Patricia P. Chan,Thomas J. Givnish,Susan R. Strickler,Chelsea D. Specht	2023	15
5	Distinct Stress‐Dependent Signatures of Cellular and Extracellular tRNA‐Derived Small RNAs Advanced Science ·Guoping Li,Aidan C. Manning,Alex Bagi,Xinyu Yang,Priyanka Gokulnath,Michail Spanos,Jonathan M. Howard,Patricia P. Chan,Thadryan Sweeney,Robert R. Kitchen,Haobo Li,Brice D. Laurent,Sary F. Aranki,Maria Kontaridis,Louise C. Laurent,Kendall Van Keuren‐Jensen,Jochen D. Muehlschlegel,Todd M. Lowe,Saumya Das	2022	34
6	R2DT is a framework for predicting and visualising RNA secondary structure using templates Nature Communications ·Blake Sweeney,David Hoksza,Eric P. Nawrocki,Carlos Eduardo Ribas,Fábio Madeira,Jamie J. Cannone,Robin R. Gutell,Aparna Maddala,Caeden D. Meade,Loren Dean Williams,Anton S. Petrov,Patricia P. Chan,Todd M. Lowe,ROBERT FINN,Anton I. Petrov	2021	77
7	tRNAscan-SE 2.0: improved detection and functional classification of transfer RNA genesbreakdown → Nucleic Acids Research ·Patricia P. Chan,Brian Y Lin,Allysia J. Mak,Todd M. Lowe	2021	930
8	An Ontology for the South African Protection of Personal Information Act UWC Research Repository (University of the Western Cape) ·Y Jafta,Louise Leenen,Patricia P. Chan	2020	1
9	Esrp1-Regulated Splicing of Arhgef11 Isoforms Is Required for Epithelial Tight Junction Integrity Cell Reports ·SungKyoung Lee,Benjamin Cieply,Yueqin Yang,Natoya Peart,Carl Glaser,Patricia P. Chan,Russ P. Carstens	2018	22
10	tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genesbreakdown → Nucleic Acids Research ·Todd M. Lowe,Patricia P. Chan	2016	2000
11	psiTurk: An open-source framework for conducting replicable behavioral experiments online Behavior Research Methods ·Todd M. Gureckis,Jay B. Martin,John V. McDonnell,Alexander Rich,Doug Markant,Anna Coenen,David Halpern,Jessica B. Hamrick,Patricia P. Chan	2015	136
12	GtRNAdb 2.0: an expanded database of transfer RNA genes identified in complete and draft genomesbreakdown → Nucleic Acids Research ·Patricia P. Chan,Todd M. Lowe	2015	694
13	Draft De Novo Transcriptome of the Rat Kangaroo Potorous tridactylus as a Tool for Cell Biology PLoS ONE ·Dylan B. Udy,Mark Voorhies,Patricia P. Chan,Todd M. Lowe,Sophie Dumont	2015	13
14	IscR Is Essential for Yersinia pseudotuberculosis Type III Secretion and Virulence PLoS Pathogens ·Halie K. Miller,Laura Kwuan,Leah Schwiesow,David L. Bernick,Erin L. Mettert,Hector A. Ramirez,James Matthew Ragle,Patricia P. Chan,Patricia J. Kiley,Todd M. Lowe,Victoria Auerbuch	2014	49
15	Complete genome sequence of Pyrobaculum oguniense Standards in Genomic Sciences ·David L. Bernick,Kevin Karplus,Lauren Michelle Lui,Joanna Coker,Julie N. Murphy,Patricia P. Chan,Aaron E. Cozen,Todd M. Lowe	2012	7
16	Modeling the Thermoproteaceae RNase P RNA RNA Biology ·Patricia P. Chan,James W. Brown,Todd M. Lowe	2012	9
17	The UCSC Archaeal Genome Browser: 2012 update Nucleic Acids Research ·Patricia P. Chan,Andrew Holmes,Andrew M. Smith,Diem K. Tran,T. M. Lowe	2011	73
18	Discovery of permuted and recently split transfer RNAs in Archaea Genome biology ·Patricia P. Chan,Aaron E. Cozen,Todd M. Lowe	2011	48
19	Functional curation of the Sulfolobus solfataricus P2 and S. acidocaldarius 98-3 complete genome sequences Extremophiles ·Dominik Esser,Theresa Kouril,Melanie Zaparty,Pawel Sierocinski,Patricia P. Chan,Todd M. Lowe,John van der Oost,Sonja‐Verena Albers,Dietmar Schomburg,Kira S. Makarova,Bettina Siebers	2011	17
20	GtRNAdb: a database of transfer RNA genes detected in genomic sequencebreakdown → Nucleic Acids Research ·Patricia P. Chan,T. M. Lowe	2008	686

About Patricia P. Chan

Patricia P. Chan is a scholar working on Molecular Biology, Applied Psychology and Endocrinology, having authored 29 papers that have together received 6.1k indexed citations. Recurring topics across this work include RNA modifications and cancer (18 papers), Genomics and Phylogenetic Studies (17 papers), RNA and protein synthesis mechanisms (16 papers), RNA Research and Splicing (5 papers), Bacteriophages and microbial interactions (3 papers), Microbial Community Ecology and Physiology (2 papers), Cancer-related molecular mechanisms research (2 papers) and Glycosylation and Glycoproteins Research (1 paper). The work is most often cited by research in Molecular Biology (4.5k citations), Ecology (1.5k citations) and Endocrinology (253 citations). Patricia P. Chan has collaborated with scholars based in United States, United Kingdom and Germany. Frequent co-authors include Todd M. Lowe, Allysia J. Mak, Aaron E. Cozen, Anna Coenen, Andrew M. Smith, Jay B. Martin, Doug Markant, Todd M. Gureckis, Andrew Holmes and Jessica B. Hamrick. Their work appears in journals such as Proceedings of the National Academy of Sciences, Nucleic Acids Research and Nature Communications.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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