Paolo Ribeca

14.4k total citations
45 papers, 1.5k citations indexed

About

Paolo Ribeca is a scholar working on Molecular Biology, Ecology and Artificial Intelligence. According to data from OpenAlex, Paolo Ribeca has authored 45 papers receiving a total of 1.5k indexed citations (citations by other indexed papers that have themselves been cited), including 19 papers in Molecular Biology, 9 papers in Ecology and 9 papers in Artificial Intelligence. Recurrent topics in Paolo Ribeca's work include Genomics and Phylogenetic Studies (16 papers), Algorithms and Data Compression (8 papers) and Animal Disease Management and Epidemiology (8 papers). Paolo Ribeca is often cited by papers focused on Genomics and Phylogenetic Studies (16 papers), Algorithms and Data Compression (8 papers) and Animal Disease Management and Epidemiology (8 papers). Paolo Ribeca collaborates with scholars based in United Kingdom, Spain and France. Paolo Ribeca's co-authors include Roderic Guigó, Michael Sammeth, Santiago Marco‐Sola, Emanuele Raineri, David G. Knowles, Jordi Estellé, Thomas Derrien, Thasso Griebel, Benedikt Zacher and Vincent Lacroix and has published in prestigious journals such as Nucleic Acids Research, Bioinformatics and PLoS ONE.

In The Last Decade

Paolo Ribeca

39 papers receiving 1.5k citations

Peers

Paolo Ribeca
John L. Spouge United States
Marco J. Morelli Italy
K. Hagiwara Japan
Kentaro Tomii Japan
Daniel Fischer Israel
Jens P. Linge Italy
Christophe Blanchet France
Ted Kalbfleisch United States
David W. Gohara United States
Francisco S. Domingues Germany
John L. Spouge United States
Paolo Ribeca
Citations per year, relative to Paolo Ribeca Paolo Ribeca (= 1×) peers John L. Spouge

Countries citing papers authored by Paolo Ribeca

Since Specialization
Citations

This map shows the geographic impact of Paolo Ribeca's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Paolo Ribeca with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Paolo Ribeca more than expected).

Fields of papers citing papers by Paolo Ribeca

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Paolo Ribeca. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Paolo Ribeca. The network helps show where Paolo Ribeca may publish in the future.

Co-authorship network of co-authors of Paolo Ribeca

This figure shows the co-authorship network connecting the top 25 collaborators of Paolo Ribeca. A scholar is included among the top collaborators of Paolo Ribeca based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Paolo Ribeca. Paolo Ribeca is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
2.
Keeling, Matt J., et al.. (2025). Incorporating Epidemiological Data into the Genomic Analysis of Partially Sampled Infectious Disease Outbreaks. Molecular Biology and Evolution. 42(4).
3.
4.
Keeling, Matt J., et al.. (2024). Inference of Infectious Disease Transmission through a Relaxed Bottleneck Using Multiple Genomes Per Host. Molecular Biology and Evolution. 41(1). 4 indexed citations
5.
Moore, Matthew, Mirjam Laager, Paolo Ribeca, & Xavier Didelot. (2024). KmerAperture: Retaining k-mer synteny for alignment-free extraction of core and accessory differences between bacterial genomes. PLoS Genetics. 20(4). e1011184–e1011184. 2 indexed citations
6.
7.
Krzywińska, Elzbieta, Paolo Ribeca, Luca Ferretti, Andrew Hammond, & Jaroslaw Krzywinski. (2023). A novel factor modulating X chromosome dosage compensation in Anopheles. Current Biology. 33(21). 4697–4703.e4. 8 indexed citations
8.
Basso, Andrea, Paolo Ribeca, Marina Bosi, et al.. (2022). AI-Based Media Coding Standards. SMPTE Motion Imaging Journal. 131(4). 10–20. 5 indexed citations
9.
Greig, David R., Marie Anne Chattaway, Gemma C. Langridge, et al.. (2022). Characterization of a P1-bacteriophage-like plasmid (phage-plasmid) harbouring bla CTX-M-15 in Salmonella enterica serovar Typhi. Microbial Genomics. 8(12). 5 indexed citations
10.
11.
Simmonds, Peter, Garry A. Luke, Paolo Ribeca, et al.. (2021). Mutagenesis Mapping of RNA Structures within the Foot-and-Mouth Disease Virus Genome Reveals Functional Elements Localized in the Polymerase (3D pol )-Encoding Region. mSphere. 6(4). e0001521–e0001521. 5 indexed citations
12.
13.
Ferretti, Luca, Eva Pérez-Martín, Fuquan Zhang, et al.. (2020). Pervasive within-host recombination and epistasis as major determinants of the molecular evolution of the foot-and-mouth disease virus capsid. PLoS Pathogens. 16(1). e1008235–e1008235. 14 indexed citations
14.
Guzman, Efrain, et al.. (2019). Bovine Derived in vitro Cultures Generate Heterogeneous Populations of Antigen Presenting Cells. Frontiers in Immunology. 10. 612–612. 11 indexed citations
15.
Āboliņš-Ābols, Mikus, Étienne Kornobis, Paolo Ribeca, et al.. (2018). Differential gene regulation underlies variation in melanic plumage coloration in the dark‐eyed junco ( Junco hyemalis ). Molecular Ecology. 27(22). 4501–4515. 46 indexed citations
16.
Rodríguez–Martín, Bernardo, Emilio Palumbo, Santiago Marco‐Sola, et al.. (2017). ChimPipe: accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data. BMC Genomics. 18(1). 7–7. 22 indexed citations
17.
Roguski, Łukasz & Paolo Ribeca. (2016). CARGO: effective format-free compressed storage of genomic information. Nucleic Acids Research. 44(12). e114–e114. 8 indexed citations
18.
Griebel, Thasso, Benedikt Zacher, Paolo Ribeca, et al.. (2012). Modelling and simulating generic RNA-Seq experiments with the flux simulator. Nucleic Acids Research. 40(20). 10073–10083. 181 indexed citations
19.
Derrien, Thomas, Jordi Estellé, David G. Knowles, et al.. (2012). Fast Computation and Applications of Genome Mappability. PLoS ONE. 7(1). e30377–e30377. 308 indexed citations
20.
Vernizzi, Graziano, Paolo Ribeca, Henri Orland, & A. Zee. (2006). Topology of pseudoknotted homopolymers. Physical Review E. 73(3). 31902–31902. 11 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

Explore authors with similar magnitude of impact

Breakdown of academic impact, for papers by John L. Spouge Breakdown of academic impact, for papers by Marco J. Morelli Breakdown of academic impact, for papers by K. Hagiwara Breakdown of academic impact, for papers by Kentaro Tomii Breakdown of academic impact, for papers by Daniel Fischer Breakdown of academic impact, for papers by Jens P. Linge Breakdown of academic impact, for papers by Christophe Blanchet Breakdown of academic impact, for papers by Ted Kalbfleisch Breakdown of academic impact, for papers by David W. Gohara Breakdown of academic impact, for papers by Francisco S. Domingues
Rankless by CCL
2026