Emanuele Raineri

3.6k total citations
18 papers, 1.0k citations indexed

About

Emanuele Raineri is a scholar working on Molecular Biology, Genetics and Cancer Research. According to data from OpenAlex, Emanuele Raineri has authored 18 papers receiving a total of 1.0k indexed citations (citations by other indexed papers that have themselves been cited), including 17 papers in Molecular Biology, 6 papers in Genetics and 4 papers in Cancer Research. Recurrent topics in Emanuele Raineri's work include RNA and protein synthesis mechanisms (6 papers), Genomics and Phylogenetic Studies (6 papers) and Genomics and Chromatin Dynamics (6 papers). Emanuele Raineri is often cited by papers focused on RNA and protein synthesis mechanisms (6 papers), Genomics and Phylogenetic Studies (6 papers) and Genomics and Chromatin Dynamics (6 papers). Emanuele Raineri collaborates with scholars based in Spain, France and United Kingdom. Emanuele Raineri's co-authors include Paolo Ribeca, Roderic Guigó, David G. Knowles, Jordi Estellé, Thomas Derrien, Luís Serrano, Carsten Horn, Mireia Garriga-Canut, Mark Isalan and Pedro Beltrão and has published in prestigious journals such as Nature, Nucleic Acids Research and Bioinformatics.

In The Last Decade

Emanuele Raineri

17 papers receiving 1.0k citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Emanuele Raineri Spain 13 837 362 175 132 41 18 1.0k
Kathryn Beal United States 12 763 0.9× 352 1.0× 87 0.5× 178 1.3× 24 0.6× 15 985
Benjamin L. Moore United Kingdom 10 720 0.9× 295 0.8× 170 1.0× 136 1.0× 65 1.6× 11 944
James Bullard United States 4 1.1k 1.3× 170 0.5× 304 1.7× 134 1.0× 53 1.3× 4 1.3k
Medhat Mahmoud United States 14 517 0.6× 384 1.1× 120 0.7× 189 1.4× 48 1.2× 22 799
Moritz Smolka Austria 4 705 0.8× 416 1.1× 127 0.7× 352 2.7× 68 1.7× 4 1.0k
Andreas Sundquist United States 6 759 0.9× 226 0.6× 79 0.5× 100 0.8× 83 2.0× 6 1000
Robert Bjornson United States 16 1000 1.2× 250 0.7× 152 0.9× 114 0.9× 137 3.3× 23 1.4k
Shanika L. Amarasinghe Australia 6 738 0.9× 181 0.5× 145 0.8× 173 1.3× 133 3.2× 12 985
Cydney Nielsen Canada 11 1.2k 1.4× 130 0.4× 389 2.2× 172 1.3× 73 1.8× 23 1.5k
Marco Mangone United States 13 1.1k 1.3× 248 0.7× 157 0.9× 282 2.1× 93 2.3× 21 1.4k

Countries citing papers authored by Emanuele Raineri

Since Specialization
Citations

This map shows the geographic impact of Emanuele Raineri's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Emanuele Raineri with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Emanuele Raineri more than expected).

Fields of papers citing papers by Emanuele Raineri

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Emanuele Raineri. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Emanuele Raineri. The network helps show where Emanuele Raineri may publish in the future.

Co-authorship network of co-authors of Emanuele Raineri

This figure shows the co-authorship network connecting the top 25 collaborators of Emanuele Raineri. A scholar is included among the top collaborators of Emanuele Raineri based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Emanuele Raineri. Emanuele Raineri is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

18 of 18 papers shown
1.
Duran‐Ferrer, Martí, Diego Mallo, Ferran Nadeu, et al.. (2025). Fluctuating DNA methylation tracks cancer evolution at clinical scale. Nature. 645(8081). 764–773. 2 indexed citations
2.
Raineri, Emanuele, et al.. (2023). cvlr: finding heterogeneously methylated genomic regions using ONT reads. Bioinformatics Advances. 3(1). vbac101–vbac101.
3.
Raineri, Emanuele, et al.. (2020). Using GARDEN-NET and ChAseR to explore human haematopoietic 3D chromatin interaction networks. Nucleic Acids Research. 48(8). 4066–4080. 12 indexed citations
4.
Stobbe, Miranda D., Gian Andri Thun, Meritxell Oliva, et al.. (2019). Recurrent somatic mutations reveal new insights into consequences of mutagenic processes in cancer. PLoS Computational Biology. 15(11). e1007496–e1007496. 19 indexed citations
5.
Horváth, Attila, Bence Dániel, Lajos Széles, et al.. (2019). Labelled regulatory elements are pervasive features of the macrophage genome and are dynamically utilized by classical and alternative polarization signals. Nucleic Acids Research. 47(6). 2778–2792. 9 indexed citations
6.
Ferretti, Luca, Alexander Klassmann, Emanuele Raineri, et al.. (2018). The neutral frequency spectrum of linked sites. Theoretical Population Biology. 123. 70–79. 6 indexed citations
7.
Hernández, Inmaculada, Heena Dhiman, Gerald Klanert, et al.. (2018). Epigenetic regulation of gene expression in Chinese Hamster Ovary cells in response to the changing environment of a batch culture. Biotechnology and Bioengineering. 116(3). 677–692. 40 indexed citations
8.
Nedialkova, Danny D., Iván Dotú, Katherine E. Sloan, et al.. (2016). A novel translational control mechanism involving RNA structures within coding sequences. Genome Research. 27(1). 95–106. 35 indexed citations
9.
Raineri, Emanuele, Marc Dabad, & Simon Heath. (2014). A Note on Exact Differences between Beta Distributions in Genomic (Methylation) Studies. PLoS ONE. 9(5). e97349–e97349. 13 indexed citations
10.
Esteve‐Codina, Anna, Yogesh Paudel, Luca Ferretti, et al.. (2013). Dissecting structural and nucleotide genome-wide variation in inbred Iberian pigs. BMC Genomics. 14(1). 148–148. 41 indexed citations
11.
Raineri, Emanuele, Luca Ferretti, Anna Esteve‐Codina, et al.. (2012). SNP calling by sequencing pooled samples. BMC Bioinformatics. 13(1). 239–239. 53 indexed citations
12.
Griebel, Thasso, Benedikt Zacher, Paolo Ribeca, et al.. (2012). Modelling and simulating generic RNA-Seq experiments with the flux simulator. Nucleic Acids Research. 40(20). 10073–10083. 181 indexed citations
13.
Derrien, Thomas, Jordi Estellé, David G. Knowles, et al.. (2012). Fast Computation and Applications of Genome Mappability. PLoS ONE. 7(1). e30377–e30377. 308 indexed citations
14.
Ferretti, Luca, Emanuele Raineri, & Sebastián E. Ramos‐Onsins. (2012). Neutrality Tests for Sequences with Missing Data. Genetics. 191(4). 1397–1401. 28 indexed citations
15.
Bussotti, Giovanni, Emanuele Raineri, Ionas Erb, et al.. (2011). BlastR—fast and accurate database searches for non-coding RNAs. Nucleic Acids Research. 39(16). 6886–6895. 24 indexed citations
16.
Raineri, Emanuele, Paolo Ribeca, Luis Serrano, & Tobias Maier. (2010). A more precise characterization of chaperonin substrates. Bioinformatics. 26(14). 1685–1689. 24 indexed citations
17.
Isalan, Mark, Konstantinos Michalodimitrakis, Carsten Horn, et al.. (2008). Evolvability and hierarchy in rewired bacterial gene networks. Nature. 452(7189). 840–845. 225 indexed citations
18.
Ribeca, Paolo & Emanuele Raineri. (2008). Faster exact Markovian probability functions for motif occurrences: a DFA-only approach. Bioinformatics. 24(24). 2839–2848. 17 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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