Kirill Zinovjev

772 total citations
38 papers, 505 citations indexed

About

Kirill Zinovjev is a scholar working on Molecular Biology, Materials Chemistry and Atomic and Molecular Physics, and Optics. According to data from OpenAlex, Kirill Zinovjev has authored 38 papers receiving a total of 505 indexed citations (citations by other indexed papers that have themselves been cited), including 28 papers in Molecular Biology, 10 papers in Materials Chemistry and 7 papers in Atomic and Molecular Physics, and Optics. Recurrent topics in Kirill Zinovjev's work include Protein Structure and Dynamics (19 papers), Enzyme Structure and Function (7 papers) and Spectroscopy and Quantum Chemical Studies (6 papers). Kirill Zinovjev is often cited by papers focused on Protein Structure and Dynamics (19 papers), Enzyme Structure and Function (7 papers) and Spectroscopy and Quantum Chemical Studies (6 papers). Kirill Zinovjev collaborates with scholars based in Spain, United Kingdom and Chile. Kirill Zinovjev's co-authors include Iñaki Tuñón, J. Javier Ruiz‐Pernía, Maite Roca, Marc W. van der Kamp, Juan Aranda, Carlos A. Ramos‐Guzmán, Edvards Liepinsh, Katarzyna Świderek, Sergio Martı́ and Rabindra Nath Manna and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Journal of the American Chemical Society and Nature Communications.

In The Last Decade

Kirill Zinovjev

38 papers receiving 502 citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Kirill Zinovjev Spain 15 327 134 79 72 33 38 505
Kira A. Armacost United States 10 386 1.2× 101 0.8× 134 1.7× 98 1.4× 9 0.3× 16 612
Narin Lawan Thailand 12 267 0.8× 71 0.5× 15 0.2× 42 0.6× 54 1.6× 27 440
Yoshitake Sakae Japan 13 410 1.3× 146 1.1× 38 0.5× 50 0.7× 6 0.2× 32 556
Dušan Petrović Sweden 16 519 1.6× 185 1.4× 32 0.4× 15 0.2× 54 1.6× 24 713
Jennifer M. Bui Canada 13 418 1.3× 103 0.8× 102 1.3× 42 0.6× 4 0.1× 26 540
Isaías Lans Spain 14 319 1.0× 85 0.6× 89 1.1× 18 0.3× 8 0.2× 24 483
Alan E. Barber United States 6 363 1.1× 88 0.7× 26 0.3× 68 0.9× 9 0.3× 7 486
Vytautas Petrauskas Lithuania 12 236 0.7× 64 0.5× 53 0.7× 45 0.6× 5 0.2× 38 394
Sı́lvia Ferrer Spain 14 292 0.9× 113 0.8× 55 0.7× 46 0.6× 9 0.3× 24 429
Yingfei Chen China 11 288 0.9× 108 0.8× 18 0.2× 32 0.4× 11 0.3× 40 481

Countries citing papers authored by Kirill Zinovjev

Since Specialization
Citations

This map shows the geographic impact of Kirill Zinovjev's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Kirill Zinovjev with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Kirill Zinovjev more than expected).

Fields of papers citing papers by Kirill Zinovjev

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Kirill Zinovjev. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Kirill Zinovjev. The network helps show where Kirill Zinovjev may publish in the future.

Co-authorship network of co-authors of Kirill Zinovjev

This figure shows the co-authorship network connecting the top 25 collaborators of Kirill Zinovjev. A scholar is included among the top collaborators of Kirill Zinovjev based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Kirill Zinovjev. Kirill Zinovjev is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Zinovjev, Kirill, et al.. (2025). Enhancing Electrostatic Embedding for ML/MM Free Energy Calculations. Journal of Chemical Theory and Computation. 21(22). 11805–11819. 1 indexed citations
2.
Zinovjev, Kirill, et al.. (2025). Unveiling the Catalytic Mechanism and Conformational Dynamics of Guinea Pig l -Asparaginase Type 1 for Leukemia Drug Design. ACS Catalysis. 15(10). 7919–7933. 1 indexed citations
3.
Świderek, Katarzyna, J. Bertrán, Kirill Zinovjev, Iñaki Tuñón, & Vicent Moliner. (2025). Advances in the Simulations of Enzyme Reactivity in the Dawn of the Artificial Intelligence Age. Wiley Interdisciplinary Reviews Computational Molecular Science. 15(1). 9 indexed citations
4.
Zinovjev, Kirill & Carles Curutchet. (2025). Improved Description of Environment and Vibronic Effects with Electrostatically Embedded ML Potentials. The Journal of Physical Chemistry Letters. 16(3). 774–781. 3 indexed citations
5.
Zinovjev, Kirill, et al.. (2024). emle-engine : A Flexible Electrostatic Machine Learning Embedding Package for Multiscale Molecular Dynamics Simulations. Journal of Chemical Theory and Computation. 20(11). 4514–4522. 18 indexed citations
6.
Kamp, Marc W. van der, et al.. (2024). Influence of Wobbling Tryptophan and Mutations on PET Degradation Explored by QM/MM Free Energy Calculations. Journal of Chemical Information and Modeling. 64(19). 7544–7554. 8 indexed citations
7.
Zinovjev, Kirill, et al.. (2024). Activation and friction in enzymatic loop opening and closing dynamics. Nature Communications. 15(1). 2490–2490. 15 indexed citations
8.
Zinovjev, Kirill, et al.. (2023). Conformational Changes and ATP Hydrolysis in Zika Helicase: The Molecular Basis of a Biomolecular Motor Unveiled by Multiscale Simulations. Journal of the American Chemical Society. 145(45). 24809–24819. 8 indexed citations
9.
Ramos‐Guzmán, Carlos A., et al.. (2023). The impact of SARS-CoV-2 3CL protease mutations on nirmatrelvir inhibitory efficiency. Computational insights into potential resistance mechanisms. Chemical Science. 14(10). 2686–2697. 20 indexed citations
10.
Ramos‐Guzmán, Carlos A., J. Javier Ruiz‐Pernía, Kirill Zinovjev, & Iñaki Tuñón. (2023). Unveiling the Mechanistic Singularities of Caspases: A Computational Analysis of the Reaction Mechanism in Human Caspase-1. ACS Catalysis. 13(7). 4348–4361. 2 indexed citations
11.
Zinovjev, Kirill, et al.. (2023). Elucidation of the Active Form and Reaction Mechanism in Human Asparaginase Type III Using Multiscale Simulations. Journal of Chemical Information and Modeling. 63(17). 5676–5688. 3 indexed citations
12.
Zinovjev, Kirill. (2023). Electrostatic Embedding of Machine Learning Potentials. Journal of Chemical Theory and Computation. 19(6). 1888–1897. 31 indexed citations
13.
Zinovjev, Kirill, et al.. (2023). 4‐Thiaproline accelerates the slow folding phase of proteins containing cis prolines in the native state by two orders of magnitude. Protein Science. 33(2). e4877–e4877. 2 indexed citations
14.
Zinovjev, Kirill & Marc W. van der Kamp. (2020). Enlighten2: molecular dynamics simulations of protein–ligand systems made accessible. Bioinformatics. 36(20). 5104–5106. 13 indexed citations
15.
Roca, Maite, Kirill Zinovjev, Sara Gómez, et al.. (2020). Elucidating the Catalytic Reaction Mechanism of Orotate Phosphoribosyltransferase by Means of X-ray Crystallography and Computational Simulations. ACS Catalysis. 10(3). 1871–1885. 9 indexed citations
16.
Zinovjev, Kirill & Iñaki Tuñón. (2017). Quantifying the limits of transition state theory in enzymatic catalysis. Proceedings of the National Academy of Sciences. 114(47). 12390–12395. 19 indexed citations
17.
Zinovjev, Kirill & Iñaki Tuñón. (2017). Adaptive Finite Temperature String Method in Collective Variables. The Journal of Physical Chemistry A. 121(51). 9764–9772. 50 indexed citations
18.
Zinovjev, Kirill & Iñaki Tuñón. (2014). Exploring chemical reactivity of complex systems with path‐based coordinates: Role of the distance metric. Journal of Computational Chemistry. 35(23). 1672–1681. 13 indexed citations
19.
Zinovjev, Kirill & Edvards Liepinsh. (2013). Validation of the CHARMM27 force field for nucleic acids using 2D nuclear overhauser effect spectroscopy. 4(2). 58–65. 6 indexed citations
20.
Zinovjev, Kirill, J. Javier Ruiz‐Pernía, & Iñaki Tuñón. (2013). Toward an Automatic Determination of Enzymatic Reaction Mechanisms and Their Activation Free Energies. Journal of Chemical Theory and Computation. 9(8). 3740–3749. 31 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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