Katherine Phillippy

13.5k citations

12 papers · 9.1k indexed · 4 hit papers · h-index 11

Impact in

Cancer Research top 0.5%
- Cancer-related molecular mechanisms research
- MicroRNA in disease regulation
Molecular Biology top 0.5%
- Bioinformatics and Genomic Networks
- RNA modifications and cancer
- Gene expression and cancer classification
- Epigenetics and DNA Methylation
- RNA Research and Splicing

Papers in

Ecology 6
- Microbial Community Ecology and Physiology 5
- Bacteriophages and microbial interactions 1
Endocrinology 1

Co-authors: Kimberly A. Marshall Irene F. Kim Pierre Ledoux Tanya Barrett Michelle Holko Hyeseung Lee Carlos Evangelista Naigong Zhang
Journals: Nucleic Acids Research (5 papers)The ISME Journal (2 papers)Applied and Environmental Microbiology (1 paper)Comparative and Functional Genomics (1 paper)PLoS Genetics (1 paper)
Partner nations: United States Australia United Kingdom

In The Last Decade

Katherine Phillippy

12 papers receiving 9.1k citations

Hit Papers

align trajectories log scale

NCBI GEO: archive for gene expression and epigenomics data sets: 23-year update 2023 · 137 citations

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if any of the following hold:

it has ≥500 total citations;
it reaches ≥1.5× the top-1% citation threshold for papers in the same subfield and year (the threshold is the minimum needed to enter the top 1%, not the average within it);
it reaches the top citation threshold in at least one of its specific research topics.

2023 Nucleic Acids Research
2012 Nucleic Acids Research
2010 Nucleic Acids Research
2008 Nucleic Acids Research

Peers

Countries citing papers authored by Katherine Phillippy

Since Specialization

Citations

This map shows the geographic impact of Katherine Phillippy's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Katherine Phillippy with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Katherine Phillippy more than expected).

Fields of papers citing papers by Katherine Phillippy

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Katherine Phillippy. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Katherine Phillippy. The network helps show where Katherine Phillippy may publish in the future.

Co-authors

The 25 scholars most cited alongside Katherine Phillippy, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Katherine Phillippy Line = papers co-authored together Katherine Phillippy links everyone, so they are left out of the graph.

All Works

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12 of 12 papers shown

#	Work
1	NCBI GEO: archive for gene expression and epigenomics data sets: 23-year update Nucleic Acids Research ·Emily Clough, Tanya Barrett, S. E. Wilhite, Pierre Ledoux, Carlos Evangelista, Irene F. Kim, Antoine Abel Missihoun, Kimberly A. Marshall, Katherine Phillippy, Zhuang Zhenye, Hyeseung Lee, Naigong Zhang, Atle Pedersen, Lukas Wagner, Vadim Zalunin, Andrey Vasilyevich Kochergin, Kukin Hit paper breakdown →	2023	137
2	Impact of DNA damaging agents on genome-wide transcriptional profiles in two marine Synechococcus species Frontiers in Microbiology ·Sasha G. Tetu, Daniel Johnson, Deepa Varkey, Katherine Phillippy, Rhona Stuart, Christopher L. Dupont, Karl A. Hassan, Brian Palenik, Ian T. Paulsen	2013	13
3	NCBI GEO: archive for functional genomics data sets—update Nucleic Acids Research ·Tanya Barrett, Guimin Qu, Pierre Ledoux, Carlos Evangelista, Irene F. Kim, Antoine Abel Missihoun, Kimberly A. Marshall, Katherine Phillippy, Zhuang Zhenye, Michelle Holko, 大林晃, Hyeseung Lee, Naigong Zhang, Kammarauche Asuzu, Atle Pedersen, Sean Davis, Kukin Hit paper breakdown →	2012	7062
4	Genetic Identification of a High-Affinity Ni Transporter and the Transcriptional Response to Ni Deprivation in Synechococcus sp. Strain WH8102 Applied and Environmental Microbiology ·Christopher L. Dupont, Daniel Johnson, Katherine Phillippy, Ian T. Paulsen, Bianca Brahamsha, Brian Palenik	2012	16
5	PtrA is required for coordinate regulation of gene expression during phosphate stress in a marine Synechococcus The ISME Journal ·Martin Ostrowski, Sophie Mazard, Sasha G. Tetu, Katherine Phillippy, Yi-Ming WEI, Brian Palenik, Ian T. Paulsen, David J. Scanlan	2010	44
6	NCBI GEO: archive for functional genomics data sets--10 years on Nucleic Acids Research ·Tanya Barrett, D. B. Troup, S. E. Wilhite, Pierre Ledoux, C. Evangelista, Irene F. Kim, Antoine Abel Missihoun, Kimberly A. Marshall, Katherine Phillippy, Philip M. Sherman, Pieter J.J. van Thiel, Michelle Holko, 江甫, 大林晃, А. Г. Соболева Hit paper breakdown →	2010	863
7	Microarray analysis of phosphate regulation in the marine cyanobacterium Synechococcus sp. WH8102 The ISME Journal ·Sasha G. Tetu, Bianca Brahamsha, Daniel Johnson, Vera Tai, Katherine Phillippy, Brian Palenik, Ian T. Paulsen	2009	113
8	GeMInA, Genomic Metadata for Infectious Agents, a geospatial surveillance pathogen database Nucleic Acids Research ·Lynn M. Schriml, Cesar Arze, Suvarna Nadendla, P F Barbara, Victor Felix, Anup Mahurkar, Katherine Phillippy, Setti Anitha, Samuel V. Angiuoli, Elodie Ghedin, Owen White, Neil Hall	2009	24
9	Whole‐genome microarray analyses of Synechococcus – Vibrio interactions Environmental Microbiology ·Vera Tai, Ian T. Paulsen, Katherine Phillippy, Daniel Johnson, Brian Palenik	2009	35
10	Statistical Analysis of Microarray Data with Replicated Spots: A Case Study withSynechococcusWH8102 Comparative and Functional Genomics ·Edward V. Thomas, Katherine Phillippy, Bianca Brahamsha, David M. Haaland, Jerilyn A. Timlin, Liam D. H. Elbourne, Brian Palenik, Ian T. Paulsen	2009	4
11	NCBI GEO: archive for high-throughput functional genomic data Nucleic Acids Research ·Tanya Barrett, D. B. Troup, S. E. Wilhite, Pierre Ledoux, Professor David Lalloo, C. Evangelista, Irene F. Kim, А. Г. Соболева, Antoine Abel Missihoun, Kimberly A. Marshall, Katherine Phillippy, Philip M. Sherman, Pieter J.J. van Thiel, Ron Edgar Hit paper breakdown →	2008	786
12	High-Throughput Phenotypic Characterization of Pseudomonas aeruginosa Membrane Transport Genes PLoS Genetics ·Daniel Johnson, Sasha G. Tetu, Katherine Phillippy, Joan Chen, Qinghu Ren, Ian T. Paulsen	2008	52

About Katherine Phillippy

Katherine Phillippy is a scholar working on Ecology, Endocrinology, Molecular Biology, Biomaterials and Genetics, having authored 12 papers that have together received 9.1k indexed citations. Recurring topics across this work include Genomics and Phylogenetic Studies (6 papers), Microbial Community Ecology and Physiology (5 papers), Gene expression and cancer classification (5 papers), Molecular Biology Techniques and Applications (3 papers), Bioinformatics and Genomic Networks (3 papers), Protist diversity and phylogeny (2 papers), Genetic Mapping and Diversity in Plants and Animals (1 paper) and Bacteriophages and microbial interactions (1 paper). The work is most often cited by research in Cancer Research (2.0k citations), Molecular Biology (6.5k citations), Immunology (1000 citations), Pulmonary and Respiratory Medicine (1.3k citations) and Aging (63 citations). Katherine Phillippy has collaborated with scholars based in United States, Australia and United Kingdom. Frequent co-authors include Kimberly A. Marshall, Irene F. Kim, Pierre Ledoux, Tanya Barrett, Michelle Holko, Hyeseung Lee, Carlos Evangelista, Naigong Zhang, Sean Davis and S. E. Wilhite. Their work appears in journals such as Nucleic Acids Research, The ISME Journal, Applied and Environmental Microbiology, Comparative and Functional Genomics and PLoS Genetics.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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