Josef C. Uyeda

3.8k total citations · 1 hit paper
41 papers, 2.4k citations indexed

About

Josef C. Uyeda is a scholar working on Paleontology, Genetics and Molecular Biology. According to data from OpenAlex, Josef C. Uyeda has authored 41 papers receiving a total of 2.4k indexed citations (citations by other indexed papers that have themselves been cited), including 21 papers in Paleontology, 15 papers in Genetics and 12 papers in Molecular Biology. Recurrent topics in Josef C. Uyeda's work include Evolution and Paleontology Studies (18 papers), Genomics and Phylogenetic Studies (10 papers) and Species Distribution and Climate Change (9 papers). Josef C. Uyeda is often cited by papers focused on Evolution and Paleontology Studies (18 papers), Genomics and Phylogenetic Studies (10 papers) and Species Distribution and Climate Change (9 papers). Josef C. Uyeda collaborates with scholars based in United States, Canada and Norway. Josef C. Uyeda's co-authors include Matthew W. Pennell, Luke J. Harmon, Graham J. Slater, Michael E. Alfaro, Jonathan M. Eastman, Joseph W. Brown, Richard G. FitzJohn, Stevan J. Arnold, Daniel S. Caetano and Rosana Zenil‐Ferguson and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Bioinformatics and PLoS ONE.

In The Last Decade

Josef C. Uyeda

38 papers receiving 2.3k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

geiger v2.0: an expanded suite of methods for fitting macroevolutionary models to phylogenetic trees

2014 753 citations Matthew W. Pennell, Graham J. Slater et al. profile →

Peers

Countries citing papers authored by Josef C. Uyeda

Since Specialization

Citations

This map shows the geographic impact of Josef C. Uyeda's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Josef C. Uyeda with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Josef C. Uyeda more than expected).

Fields of papers citing papers by Josef C. Uyeda

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Josef C. Uyeda. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Josef C. Uyeda. The network helps show where Josef C. Uyeda may publish in the future.

Co-authorship network of co-authors of Josef C. Uyeda

This figure shows the co-authorship network connecting the top 25 collaborators of Josef C. Uyeda. A scholar is included among the top collaborators of Josef C. Uyeda based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Josef C. Uyeda. Josef C. Uyeda is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Social Environment and the Evolution of Delayed Reproduction in Birds 2025 ·Systematic Biology ·(unknown), Josef C. Uyeda, Richard O. Prum	1
2	Fundamental constraints on vertebrate life history are shaped by aquatic–terrestrial transitions and reproductive mode 2025 ·Nature Ecology & Evolution ·George C. Brooks, Josef C. Uyeda, (unknown), (unknown), Christopher G. Mull, Holly K. Kindsvater	0
3	Loss of a morph is associated with asymmetric character release in a radiation of woodland salamanders 2025 ·Evolution ·(unknown), Maggie M. Hantak, (unknown), Josef C. Uyeda, Alan R. Lemmon, Emily Moriarty Lemmon, Robert Guralnick, David C. Blackburn, Shawn R. Kuchta	0
4	Opportunity begets opportunity to drive macroevolutionary dynamics of a diverse lizard radiation 2024 ·Evolution Letters ·Laura R. V. Alencar, Orlando Schwery, (unknown), (unknown), (unknown), Brooke L. Bodensteiner, Josef C. Uyeda, Martha M. Muñoz	5
5	ontophylo: Reconstructing the evolutionary dynamics of phenomes using new ontology‐informed phylogenetic methods 2024 ·Methods in Ecology and Evolution ·(unknown), Josef C. Uyeda, István Mikó, Sergei Tarasov	3
6	Discovering Novel Biological Traits From Images Using Phylogeny-Guided Neural Networks 2023 ·VTechWorks (Virginia Tech) ·(unknown), (unknown), (unknown), Josef C. Uyeda, Meghan A. Balk, Wasila Dahdul, (unknown), Henry L. Bart, Paula Mabee, Hilmar Lapp, James P. Balhoff, (unknown), (unknown), Wei‐Lun Chao, Charles V. Stewart, Daniel I. Rubenstein, Tanya Berger‐Wolf, Anuj Karpatne	3
7	Conceptual and empirical bridges between micro- and macroevolution 2023 ·Nature Ecology & Evolution ·Jonathan Rolland, L. Francisco Henao‐Díaz, Michael Doebeli, Rachel M. Germain, Luke J. Harmon, L. Lacey Knowles, Lee Hsiang Liow, Judith E. Mank, Antonín Macháč, Sarah P. Otto, Matt Pennell, Nicolas Salamin, Daniele Silvestro, (unknown), Josef C. Uyeda, Catherine E. Wagner, Dolph Schluter	39
8	Rules of teeth development align microevolution with macroevolution in extant and extinct primates 2023 ·Nature Ecology & Evolution ·Fábio A. Machado, Carrie S. Mongle, Graham J. Slater, (unknown), (unknown), (unknown), (unknown), Josef C. Uyeda	9
9	A Cautionary Note on “A Cautionary Note on the Use of Ornstein Uhlenbeck Models in Macroevolutionary Studies” 2023 ·Systematic Biology ·Mark Grabowski, Jason Pienaar, Kjetil Lysne Voje, Staffan Andersson, (unknown), Bjørn Tore Kopperud, Daniel S. Moen, Masahito Tsuboi, Josef C. Uyeda, Thomas F. Hansen	22
10	A timeline of bacterial and archaeal diversification in the ocean 2023 ·eLife ·Carolina A. Martínez-Gutiérrez, Josef C. Uyeda, Frank O. Aylward	1
11	A timeline of bacterial and archaeal diversification in the ocean 2023 ·eLife ·Carolina A. Martínez-Gutiérrez, Josef C. Uyeda, Frank O. Aylward	8
12	rphenoscate: An R package for semantics‐aware evolutionary analyses of anatomical traits 2023 ·Methods in Ecology and Evolution ·(unknown), Sergei Tarasov, (unknown), Hilmar Lapp, James P. Balhoff, Todd Vision, Wasila Dahdul, Paula Mabee, Josef C. Uyeda	3
13	Assessing Bayesian Phylogenetic Information Content of Morphological Data Using Knowledge From Anatomy Ontologies 2022 ·Systematic Biology ·(unknown), Wasila Dahdul, Hilmar Lapp, James P. Balhoff, Todd Vision, Paula Mabee, Josef C. Uyeda	5
14	Cross-disciplinary information for understanding macroevolution 2022 ·Trends in Ecology & Evolution ·Lee Hsiang Liow, Josef C. Uyeda, Gene Hunt	12
15	`treedata.table` : a wrapper for `data.table` that enables fast manipulation of large phylogenetic trees matched to data 2021 ·PeerJ ·Cristian Román‐Palacios, April Wright, Josef C. Uyeda	3
16	Scaling between macro‐ to microscale climatic data reveals strong phylogenetic inertia in niche evolution in plethodontid salamanders 2020 ·Evolution ·(unknown), Martha M. Muñoz, Josef C. Uyeda, Donald B. Miles	23
17	PARAMO: A Pipeline for Reconstructing Ancestral Anatomies Using Ontologies and Stochastic Mapping 2019 ·Insect Systematics and Diversity ·Sergei Tarasov, István Mikó, Matthew Yoder, Josef C. Uyeda	13
18	Comparative Analysis of Principal Components Can be Misleading 2015 ·Systematic Biology ·Josef C. Uyeda, Daniel S. Caetano, Matthew W. Pennell	210
19	Molecular phylogeny of the subfamily Amphistichinae (Teleostei: Embiotocidae) reveals parallel divergent evolution of red pigmentation in two rapidly evolving lineages of sand-dwelling surfperch 2011 ·Journal of Fish Biology ·(unknown), (unknown), Josef C. Uyeda, Theodore J. Morgan	4
20	DRIFT PROMOTES SPECIATION BY SEXUAL SELECTION 2008 ·Evolution ·Josef C. Uyeda, Stevan J. Arnold, Paul A. Hohenlohe, Louise S. Mead	85

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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