Jishou Ruan

2.2k total citations
64 papers, 1.6k citations indexed

About

Jishou Ruan is a scholar working on Molecular Biology, Computational Theory and Mathematics and Materials Chemistry. According to data from OpenAlex, Jishou Ruan has authored 64 papers receiving a total of 1.6k indexed citations (citations by other indexed papers that have themselves been cited), including 55 papers in Molecular Biology, 13 papers in Computational Theory and Mathematics and 10 papers in Materials Chemistry. Recurrent topics in Jishou Ruan's work include Machine Learning in Bioinformatics (26 papers), Protein Structure and Dynamics (24 papers) and RNA and protein synthesis mechanisms (17 papers). Jishou Ruan is often cited by papers focused on Machine Learning in Bioinformatics (26 papers), Protein Structure and Dynamics (24 papers) and RNA and protein synthesis mechanisms (17 papers). Jishou Ruan collaborates with scholars based in China, Canada and United States. Jishou Ruan's co-authors include Lukasz Kurgan, Ke Chen, Shiyi Shen, Tuo Zhang, Jianzhao Gao, Shan Gao, Wei Zheng, Yu Sun, Hua Zhang and Wenjun Bu and has published in prestigious journals such as Bioinformatics, PLoS ONE and Biochemical and Biophysical Research Communications.

In The Last Decade

Jishou Ruan

63 papers receiving 1.6k citations

Peers

Jishou Ruan
Hannes Braberg United States
John Ingraham United States
Sebastian Bittrich United States
Jishou Ruan
Citations per year, relative to Jishou Ruan Jishou Ruan (= 1×) peers Toshiaki Katayama

Countries citing papers authored by Jishou Ruan

Since Specialization
Citations

This map shows the geographic impact of Jishou Ruan's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jishou Ruan with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jishou Ruan more than expected).

Fields of papers citing papers by Jishou Ruan

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jishou Ruan. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jishou Ruan. The network helps show where Jishou Ruan may publish in the future.

Co-authorship network of co-authors of Jishou Ruan

This figure shows the co-authorship network connecting the top 25 collaborators of Jishou Ruan. A scholar is included among the top collaborators of Jishou Ruan based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Jishou Ruan. Jishou Ruan is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Shi, Jingsong, Guangyou Duan, Fan Yang, et al.. (2022). How the Replication and Transcription Complex Functions in Jumping Transcription of SARS-CoV-2. Frontiers in Genetics. 13. 904513–904513. 4 indexed citations
2.
Jia, Chang, et al.. (2022). Precise annotation of Drosophila mitochondrial genomes leads to insights into AT-rich regions. Mitochondrion. 65. 145–149. 7 indexed citations
3.
Zheng, Wei, Qiqige Wuyun, Yang Li, et al.. (2019). Detecting distant-homology protein structures by aligning deep neural-network based contact maps. PLoS Computational Biology. 15(10). e1007411–e1007411. 36 indexed citations
4.
Xu, Xiaofeng, Zhi Cheng, Xue Yao, et al.. (2019). Using Pan RNA-Seq Analysis to Reveal the Ubiquitous Existence of 5′ and 3′ End Small RNAs. Frontiers in Genetics. 10. 105–105. 18 indexed citations
5.
Luo, Ping, et al.. (2017). Disease Gene Prediction by Integrating PPI Networks, Clinical RNA-Seq Data and OMIM Data. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 16(1). 222–232. 47 indexed citations
6.
Gao, Shan, Xiaoxuan Tian, Hong Chang, et al.. (2017). Two novel lncRNAs discovered in human mitochondrial DNA using PacBio full-length transcriptome data. Mitochondrion. 38. 41–47. 68 indexed citations
7.
Wang, Tong, Wei Zheng, Qiqige Wuyun, et al.. (2016). PrAS: Prediction of amidation sites using multiple feature extraction. Computational Biology and Chemistry. 66. 57–62. 8 indexed citations
8.
Cao, Shujuan, et al.. (2015). Uncovering the Molecular Mechanism of Actions between Pharmaceuticals and Proteins on the AD Network. PLoS ONE. 10(12). e0144387–e0144387. 4 indexed citations
9.
Zheng, Wei, et al.. (2015). Analysis of Conformational B-Cell Epitopes in the Antibody-Antigen Complex Using the Depth Function and the Convex Hull. PLoS ONE. 10(8). e0134835–e0134835. 22 indexed citations
10.
Zhang, Ning, Shan Gao, Lei Zhang, Jishou Ruan, & Tao Zhang. (2013). Statistical Analysis of Terminal Extensions of Protein β-Strand Pairs. PubMed. 2013. 1–7. 4 indexed citations
11.
Zhang, Chen, et al.. (2013). Exploring the Molecular Mechanism of Action Between Drug and RNA Polymerase Based on Partially-Resolved Spatial Structures. Current Computer - Aided Drug Design. 9(4). 547–555. 3 indexed citations
12.
Zhang, Ning, Biqing Li, Shan Gao, Jishou Ruan, & Yu‐Dong Cai. (2012). Computational prediction and analysis of protein γ-carboxylation sites based on a random forest method. Molecular BioSystems. 8(11). 2946–2955. 36 indexed citations
13.
Hu, Gang, Jianzhao Gao, Kui Wang, et al.. (2012). Finding Protein Targets for Small Biologically Relevant Ligands across Fold Space Using Inverse Ligand Binding Predictions. Structure. 20(11). 1815–1822. 15 indexed citations
14.
Gao, Shan, et al.. (2012). Processing and analysis of ChIP-seq data. Hereditas (Beijing). 34(6). 773–783. 1 indexed citations
15.
Mao, Jingyuan, Hongcai Shang, Xianliang Wang, et al.. (2009). Study on the evaluation of the clinical effects of traditional chinese medicine in heart failure by complex intervention: protocol of SECETCM-HF. Trials. 10(1). 122–122. 12 indexed citations
16.
Zhang, Hua, Tuo Zhang, Ke Chen, et al.. (2008). Sequence based residue depth prediction using evolutionary information and predicted secondary structure. BMC Bioinformatics. 9(1). 388–388. 36 indexed citations
17.
Ruan, Jishou, et al.. (2008). HuMiTar: A sequence-based method for prediction of human microRNA targets. Algorithms for Molecular Biology. 3(1). 16–16. 19 indexed citations
18.
Zhang, Ning, Jishou Ruan, Jie Wu, & Tao Zhang. (2007). SHEETSPAIR: A Database of Amino Acid Pairs in Protein Sheet Structures. Data Science Journal. 6. S589–S595. 5 indexed citations
19.
Ruan, Jishou, Ke Chen, Jack A. Tuszyński, & Lukasz Kurgan. (2006). Quantitative Analysis of the Conservation of the Tertiary Structure of Protein Segments. The Protein Journal. 25(5). 301–315. 5 indexed citations
20.
Shen, Shiyi, Bo Kai, Jishou Ruan, et al.. (2006). Probabilistic analysis of the frequencies of amino acid pairs within characterized protein sequences. Physica A Statistical Mechanics and its Applications. 370(2). 651–662. 18 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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