Jakub Rídl

2.1k total citations · 1 hit paper
27 papers, 1.6k citations indexed

About

Jakub Rídl is a scholar working on Molecular Biology, Ecology and Pollution. According to data from OpenAlex, Jakub Rídl has authored 27 papers receiving a total of 1.6k indexed citations (citations by other indexed papers that have themselves been cited), including 17 papers in Molecular Biology, 14 papers in Ecology and 7 papers in Pollution. Recurrent topics in Jakub Rídl's work include Microbial Community Ecology and Physiology (13 papers), Genomics and Phylogenetic Studies (10 papers) and Microbial bioremediation and biosurfactants (5 papers). Jakub Rídl is often cited by papers focused on Microbial Community Ecology and Physiology (13 papers), Genomics and Phylogenetic Studies (10 papers) and Microbial bioremediation and biosurfactants (5 papers). Jakub Rídl collaborates with scholars based in Czechia, United States and Germany. Jakub Rídl's co-authors include Čestmı́r Vlček, Jaroslav Šnajdr, Lucia Žifčáková, Vendula Valášková, Jana Voříšková, Petr Baldrián, Miroslav Kolařík, Martina Štursová, Tomáš Větrovský and Jan Kopecký and has published in prestigious journals such as Nature Communications, PLoS ONE and Journal of Bacteriology.

In The Last Decade

Jakub Rídl

26 papers receiving 1.5k citations

Hit Papers

align trajectories sort by overperformance

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Active and total microbial communities in forest soil are largely different and highly stratified during decomposition

2011 674 citations Jakub Rídl, Čestmı́r Vlček et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Jakub Rídl Czechia	16	574	550	489	247	226	27	1.6k
Václav Krištůfek Czechia	23	385 0.7×	548 1.0×	632 1.3×	354 1.4×	212 0.9×	64	1.8k
Roland C. Wilhelm United States	23	625 1.1×	696 1.3×	482 1.0×	387 1.6×	176 0.8×	47	2.0k
Cyrus A. Mallon Netherlands	8	429 0.7×	446 0.8×	641 1.3×	177 0.7×	139 0.6×	9	1.4k
Michaeline Albright United States	12	755 1.3×	1.1k 2.0×	484 1.0×	432 1.7×	227 1.0×	26	2.0k
Teresa Bilinski United States	5	702 1.2×	1.1k 1.9×	357 0.7×	196 0.8×	136 0.6×	7	1.5k
Roberto A. Geremia France	25	477 0.8×	494 0.9×	697 1.4×	283 1.1×	208 0.9×	47	1.7k
Mohamed El-Hadidi Egypt	11	721 1.3×	638 1.2×	257 0.5×	196 0.8×	185 0.8×	40	1.8k
Joshua Ladau United States	14	923 1.6×	1.0k 1.8×	282 0.6×	217 0.9×	104 0.5×	25	2.1k
Renmao Tian China	28	694 1.2×	864 1.6×	381 0.8×	196 0.8×	480 2.1×	67	2.3k
Samuel Jacquiod France	29	682 1.2×	793 1.4×	865 1.8×	461 1.9×	389 1.7×	54	2.2k

Countries citing papers authored by Jakub Rídl

Since Specialization

Citations

This map shows the geographic impact of Jakub Rídl's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jakub Rídl with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jakub Rídl more than expected).

Fields of papers citing papers by Jakub Rídl

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jakub Rídl. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jakub Rídl. The network helps show where Jakub Rídl may publish in the future.

Co-authorship network of co-authors of Jakub Rídl

This figure shows the co-authorship network connecting the top 25 collaborators of Jakub Rídl. A scholar is included among the top collaborators of Jakub Rídl based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Jakub Rídl. Jakub Rídl is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Rídl, Jakub, Dmitrij Dedukh, Stephen A. Schlebusch, et al.. (2025). Germline-restricted chromosome of songbirds has different centromere compared to regular chromosomes. Heredity. 1 indexed citations

Fraraccio, Serena, Jakub Rídl, Jáchym Šuman, et al.. (2025). Phenol-driven cometabolic degradation of cis-1,2-dichloroethene (cDCE): insights from Acinetobacter pittii and Ectopseudomonas alcaliphila. Environmental Sciences Europe. 37(1). 1 indexed citations

Schlebusch, Stephen A., Jakub Rídl, Francisco J. Ruíz-Ruano, et al.. (2023). Rapid gene content turnover on the germline-restricted chromosome in songbirds. Nature Communications. 14(1). 4579–4579. 11 indexed citations

Šuman, Jáchym, Michal Strejcek, Meina Neumann‐Schaal, et al.. (2022). Arthrobacter polaris sp. nov., a new cold-adapted member of the family Micrococcaceae isolated from Antarctic fellfield soil. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 72(10). 4 indexed citations

Dresler, Jiří, et al.. (2022). Population Genomics of Microbial Biostalactites: Non-recombinogenic Genome Islands and Microdiversification by Transposons. Frontiers in Microbiology. 13. 828531–828531.

Fraraccio, Serena, Iva Dolinová, Jakub Rídl, et al.. (2022). Genomic analysis of Acinetobacter pittii CEP14 reveals its extensive biodegradation capabilities, including cometabolic degradation of cis-1,2-dichloroethene. Antonie van Leeuwenhoek. 115(8). 1041–1057. 4 indexed citations

Šuman, Jáchym, et al.. (2020). Genomic analysis of dibenzofuran-degradingPseudomonas veroniistrain Pvy reveals its biodegradative versatility. G3 Genes Genomes Genetics. 11(2). 7 indexed citations

Rídl, Jakub, Jáchym Šuman, Serena Fraraccio, et al.. (2018). Complete genome sequence of Pseudomonas alcaliphila JAB1 (=DSM 26533), a versatile degrader of organic pollutants. Standards in Genomic Sciences. 13(1). 3–3. 34 indexed citations

Janoušek, Václav, Jiří Reif, Jakub Rídl, et al.. (2018). Genomic islands of differentiation in two songbird species reveal candidate genes for hybrid female sterility. Molecular Ecology. 27(4). 949–958. 23 indexed citations

10.

Janko, Karel, Jan Pačes, Hilde Wilkinson‐Herbots, et al.. (2017). Hybrid asexuality as a primary postzygotic barrier between nascent species: On the interconnection between asexuality, hybridization and speciation. Molecular Ecology. 27(1). 248–263. 58 indexed citations

11.

Rídl, Jakub, Michal Kolář, Michal Strejcek, et al.. (2016). Plants Rather than Mineral Fertilization Shape Microbial Community Structure and Functional Potential in Legacy Contaminated Soil. Frontiers in Microbiology. 7. 995–995. 34 indexed citations

12.

Nývltová, Eva, Courtney W. Stairs, Ivan Hrdý, et al.. (2015). Lateral Gene Transfer and Gene Duplication Played a Key Role in the Evolution of Mastigamoeba balamuthi Hydrogenosomes. Molecular Biology and Evolution. 32(4). 1039–1055. 45 indexed citations

13.

Strejcek, Michal, Qiong Wang, Jakub Rídl, & Ondřej Uhlík. (2015). Hunting Down Frame Shifts: Ecological Analysis of Diverse Functional Gene Sequences. Frontiers in Microbiology. 6. 1267–1267. 3 indexed citations

14.

Uhlík, Ondřej, Michal Strejcek, Jan Vondráček, et al.. (2014). Bacterial acquisition of hexachlorobenzene-derived carbon in contaminated soil. Chemosphere. 113. 141–145. 16 indexed citations

15.

Klimešová, Klára, Miloslav Kverka, Zuzana Jirásková Zákostelská, et al.. (2013). Altered Gut Microbiota Promotes Colitis-Associated Cancer in IL-1 Receptor–Associated Kinase M–Deficient Mice. Inflammatory Bowel Diseases. 19(6). 1266–1277. 78 indexed citations

16.

Uhlík, Ondřej, Lucie Musilová, Jakub Rídl, et al.. (2012). Plant secondary metabolite-induced shifts in bacterial community structure and degradative ability in contaminated soil. Applied Microbiology and Biotechnology. 97(20). 9245–9256. 56 indexed citations

17.

Uhlík, Ondřej, Jiri Wald, Michal Strejcek, et al.. (2012). Identification of Bacteria Utilizing Biphenyl, Benzoate, and Naphthalene in Long-Term Contaminated Soil. PLoS ONE. 7(7). e40653–e40653. 92 indexed citations

18.

Pačes, Jan, Yao‐Ting Huang, Václav Pačes, Jakub Rídl, & Chung-Ming Chang. (2012). New insight into transcription of human endogenous retroviral elements. New Biotechnology. 30(3). 314–318. 15 indexed citations

19.

Zákostelská, Zuzana Jirásková, Miloslav Kverka, Klára Klimešová, et al.. (2011). Lysate of Probiotic Lactobacillus casei DN-114 001 Ameliorates Colitis by Strengthening the Gut Barrier Function and Changing the Gut Microenvironment. PLoS ONE. 6(11). e27961–e27961. 177 indexed citations

20.

Černý, Viktor, Connie J. Mulligan, Jakub Rídl, et al.. (2008). Regional differences in the distribution of the sub‐Saharan, West Eurasian, and South Asian mtDNA lineages in Yemen. American Journal of Physical Anthropology. 136(2). 128–137. 45 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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