J. Harry Caufield

1.6k total citations
31 papers, 360 citations indexed

About

J. Harry Caufield is a scholar working on Molecular Biology, Artificial Intelligence and Genetics. According to data from OpenAlex, J. Harry Caufield has authored 31 papers receiving a total of 360 indexed citations (citations by other indexed papers that have themselves been cited), including 28 papers in Molecular Biology, 11 papers in Artificial Intelligence and 5 papers in Genetics. Recurrent topics in J. Harry Caufield's work include Biomedical Text Mining and Ontologies (14 papers), Bioinformatics and Genomic Networks (12 papers) and Semantic Web and Ontologies (6 papers). J. Harry Caufield is often cited by papers focused on Biomedical Text Mining and Ontologies (14 papers), Bioinformatics and Genomic Networks (12 papers) and Semantic Web and Ontologies (6 papers). J. Harry Caufield collaborates with scholars based in United States, Germany and China. J. Harry Caufield's co-authors include Peter Uetz, Jitender Mehla, Peipei Ping, David A. Liem, Stefan Wuchty, Chris Mungall, Gail E. Christie, Yizhou Sun, Patricia Sikorski and Andrey Tovchigrechko and has published in prestigious journals such as Nucleic Acids Research, Journal of Biological Chemistry and Bioinformatics.

In The Last Decade

J. Harry Caufield

31 papers receiving 358 citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
J. Harry Caufield United States 13 223 74 38 37 31 31 360
Viktoria Dorfer Austria 9 401 1.8× 26 0.4× 20 0.5× 18 0.5× 23 0.7× 23 562
Gershon Celniker Israel 7 394 1.8× 20 0.3× 32 0.8× 93 2.5× 39 1.3× 10 583
Steven R. Ness Canada 7 155 0.7× 27 0.4× 16 0.4× 31 0.8× 10 0.3× 21 350
Barbora Trubenová United Kingdom 9 95 0.4× 74 1.0× 15 0.4× 85 2.3× 15 0.5× 16 263
Axel Bernal United States 5 399 1.8× 24 0.3× 65 1.7× 62 1.7× 8 0.3× 6 510
Cedrik Magis Spain 7 272 1.2× 31 0.4× 37 1.0× 50 1.4× 9 0.3× 12 382
Yunkun Wu China 11 296 1.3× 21 0.3× 12 0.3× 21 0.6× 44 1.4× 25 408
Bryce Kille United States 11 462 2.1× 41 0.6× 31 0.8× 30 0.8× 6 0.2× 16 583
Pushkala Jayaraman United States 10 154 0.7× 56 0.8× 24 0.6× 47 1.3× 5 0.2× 22 322
Nikolas Papanikolaou Greece 10 379 1.7× 31 0.4× 97 2.6× 28 0.8× 14 0.5× 14 530

Countries citing papers authored by J. Harry Caufield

Since Specialization
Citations

This map shows the geographic impact of J. Harry Caufield's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by J. Harry Caufield with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites J. Harry Caufield more than expected).

Fields of papers citing papers by J. Harry Caufield

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by J. Harry Caufield. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by J. Harry Caufield. The network helps show where J. Harry Caufield may publish in the future.

Co-authorship network of co-authors of J. Harry Caufield

This figure shows the co-authorship network connecting the top 25 collaborators of J. Harry Caufield. A scholar is included among the top collaborators of J. Harry Caufield based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with J. Harry Caufield. J. Harry Caufield is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Hegde, Harshad, Jennifer Vendetti, Damien Goutte-Gattat, et al.. (2025). A change language for ontologies and knowledge graphs. Database. 2025. 4 indexed citations
2.
Cappelletti, Luca, Tommaso Fontana, Elena Casiraghi, et al.. (2024). Node-degree aware edge sampling mitigates inflated classification performance in biomedical random walk-based graph representation learning. Bioinformatics Advances. 4(1). vbae036–vbae036. 4 indexed citations
3.
Joachimiak, Marcin P., Mark A. Miller, J. Harry Caufield, et al.. (2024). The Artificial Intelligence Ontology: LLM-Assisted Construction of AI Concept Hierarchies. Applied Ontology. 19(4). 408–418. 1 indexed citations
4.
Caufield, J. Harry, Harshad Hegde, Vincent Emonet, et al.. (2024). Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES): a method for populating knowledge bases using zero-shot learning. Bioinformatics. 40(3). 31 indexed citations
5.
Caufield, J. Harry, et al.. (2023). A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease <em>via</em> Biomedical Reports. Journal of Visualized Experiments. 1 indexed citations
6.
Mehla, Jitender, George W. Liechti, Randy M. Morgenstein, et al.. (2021). ZapG (YhcB/DUF1043), a novel cell division protein in gamma-proteobacteria linking the Z-ring to septal peptidoglycan synthesis. Journal of Biological Chemistry. 296. 100700–100700. 8 indexed citations
7.
Caufield, J. Harry, David A. Liem, Karol E. Watson, et al.. (2018). A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts. Journal of Visualized Experiments. 5 indexed citations
8.
Wuchty, Stefan, Stephan A. Müller, J. Harry Caufield, et al.. (2018). Proteome Data Improves Protein Function Prediction in the Interactome of Helicobacter pylori. Molecular & Cellular Proteomics. 17(5). 961–973. 7 indexed citations
9.
Caufield, J. Harry, David A. Liem, Karol E. Watson, et al.. (2018). A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts. Journal of Visualized Experiments. 6 indexed citations
10.
Liem, David A., Sanjana Murali, Yu Shi, et al.. (2018). Phrase mining of textual data to analyze extracellular matrix protein patterns across cardiovascular disease. American Journal of Physiology-Heart and Circulatory Physiology. 315(4). H910–H924. 19 indexed citations
11.
Caufield, J. Harry, Shaun P. Setty, David A. Liem, et al.. (2018). A reference set of curated biomedical data and metadata from clinical case reports. Scientific Data. 5(1). 180258–180258. 21 indexed citations
12.
Mehla, Jitender, J. Harry Caufield, & Peter Uetz. (2018). Making the Right Choice: Critical Parameters of the Y2H Systems. Methods in molecular biology. 1794. 17–28. 5 indexed citations
13.
Mehla, Jitender, Rebekah M. Dedrick, J. Harry Caufield, et al.. (2017). Virus-host protein-protein interactions of mycobacteriophage Giles. Scientific Reports. 7(1). 16514–16514. 8 indexed citations
14.
Mehla, Jitender, et al.. (2017). A Comparison of Two-Hybrid Approaches for Detecting Protein–Protein Interactions. Methods in enzymology on CD-ROM/Methods in enzymology. 586. 333–358. 34 indexed citations
15.
Caufield, J. Harry, et al.. (2017). Bacterial protein meta-interactomes predict cross-species interactions and protein function. BMC Bioinformatics. 18(1). 171–171. 14 indexed citations
16.
Mehla, Jitender, J. Harry Caufield, & Peter Uetz. (2015). Mapping Protein–Protein Interactions Using Yeast Two-Hybrid Assays. Cold Spring Harbor Protocols. 2015(5). pdb.prot086157–pdb.prot086157. 17 indexed citations
17.
Mehla, Jitender, J. Harry Caufield, & Peter Uetz. (2015). The Yeast Two-Hybrid System: A Tool for Mapping Protein–Protein Interactions. Cold Spring Harbor Protocols. 2015(5). pdb.top083345–pdb.top083345. 40 indexed citations
18.
Mehla, Jitender, Rebekah M. Dedrick, J. Harry Caufield, et al.. (2015). The Protein Interactome of Mycobacteriophage Giles Predicts Functions for Unknown Proteins. Journal of Bacteriology. 197(15). 2508–2516. 13 indexed citations
19.
Caufield, J. Harry, et al.. (2012). A comparison and optimization of yeast two-hybrid systems. Methods. 58(4). 317–324. 22 indexed citations
20.
Caufield, J. Harry. (2012). N-TERMINAL PROCESSING OF RIBOSOMAL PROTEIN L27 IN STAPHYLOCOCCUS AUREUS. VCU Scholars Compass (Virginia Commonwealth University). 1 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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