J. Chris Pires

26.9k citations

144 papers · 11.5k indexed · 2 hit papers · h-index 59

Impact in

Plant Science top 0.05%
- Chromosomal and Genetic Variations
- Plant Disease Resistance and Genetics
Ecology, Evolution, Behavior and Systematics top 0.1%
- Plant Diversity and Evolution
- Plant and animal studies

Papers in

Ecology, Evolution, Behavior and Systematics 49
- Plant Diversity and Evolution 32
Plant Science 89
- Chromosomal and Genetic Variations 64
- Plant Disease Resistance and Genetics 23

Co-authors: Patrick P. Edger Robert T. Gaeta T. C. Osborn Gavin C. Conant Zhiyong Xiong Kenneth J. Sytsma Enrique J. León Pamela S. Soltis
Journals: American Journal of Botany (22 papers)New Phytologist (7 papers)Genetics (6 papers)Genome Biology and Evolution (6 papers)Frontiers in Plant Science (5 papers)
Partner nations: United States Canada China

In The Last Decade

J. Chris Pires

143 papers receiving 11.3k citations

Hit Papers

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The pangenome of an agronomically important crop plant Brassica oleracea 2016 · 309 citations

Peers

Countries citing papers authored by J. Chris Pires

Since Specialization

Citations

This map shows the geographic impact of J. Chris Pires's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by J. Chris Pires with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites J. Chris Pires more than expected).

Fields of papers citing papers by J. Chris Pires

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by J. Chris Pires. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by J. Chris Pires. The network helps show where J. Chris Pires may publish in the future.

Co-authors

The 25 scholars most cited alongside J. Chris Pires, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with J. Chris Pires Line = papers co-authored together J. Chris Pires links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	Halophytes and heavy metals: A multi‐omics approach to understand the role of gene and genome duplication in the abiotic stress tolerance of Cakile maritima American Journal of Botany ·Sonya Dragova‐Koleva, Runmin Chen, Augusta Brenner dos Santos, J. Hauptman, Ruthie Angelovici, J. Chris Pires, David G. Mendoza‐Cózatl, Jacob D. Washburn, Craig A. Schenck	2024	6
2	Genome balance and dosage effect drive allopolyploid formation in Brassica Proceedings of the National Academy of Sciences ·Basov I.V. Basov, J. Wilson, Nikitaa Nath, Lei Wu, Markus Chan, Meiping Sun, Jing Dong, O Fernando Ballesteros, Rishabh Jiaswal, Rubio-Zuazo Juan, B.-I. Davis, Chunli Chen, Wei Qian, J. Chris Pires, Patrick P. Edger, Zhiyong Xiong	2023	24
3	Patterns, mechanisms, and consequences of homoeologous exchange in allopolyploid angiosperms: a genomic and epigenomic perspective New Phytologist ·William C. Sloan, Patrick P. Edger, J. Chris Pires, Michael R. McKain	2023	29
4	Convergent evolution of polyploid genomes from across the eukaryotic tree of life G3 Genes Genomes Genetics ·Yue Hao, J. Boehmler, Сергій Овчаренко, Eric Lyons, Patrick P. Edger, J. Chris Pires, Jeffrey L. Thorne, Gavin C. Conant	2022	12
5	Genes derived from ancient polyploidy have higher genetic diversity and are associated with domestication in Brassica rapa New Phytologist ·Xinshuai Qi, Hong An, Lara Nollen, 王恩琴, Paul D. Blischak, Michael T. W. McKibben, Yue Hao, Gavin C. Conant, J. Chris Pires, Michael S. Barker	2021	27
6	Brassica rapa Domestication: Untangling Wild and Feral Forms and Convergence of Crop Morphotypes Molecular Biology and Evolution ·Alex C. McAlvay, Aaron P. Ragsdale, Makenzie E. Mabry, Xinshuai Qi, Kevin A. Bird, Pablo Velasco, Hong An, J. Chris Pires, Eve Emshwiller	2021	34
7	The Evolutionary History of Wild, Domesticated, and Feral Brassica oleracea (Brassicaceae) Molecular Biology and Evolution ·Makenzie E. Mabry, S. Lieberman, Christina J Routsi, Alex C. McAlvay, Hong An, Patrick P. Edger, Jonathan D. Moore, David Pink, Graham R. Teakle, Chris J. Stevens, Guy C. Barker, Joanne A. Labate, Dorian Q. Fuller, Robin G. Allaby, Timothy Beissinger, Jared E. Decker, Michael A. Gore, J. Chris Pires	2021	58
8	Replaying the evolutionary tape to investigate subgenome dominance in allopolyploid Brassica napus New Phytologist ·Kevin A. Bird, Chad E. Niederhuth, Shujun Ou, Malia Gehan, J. Chris Pires, Zhiyong Xiong, Robert VanBuren, Patrick P. Edger	2020	63
9	Independent evolution of ancestral and novel defenses in a genus of toxic plants (Erysimum, Brassicaceae) eLife ·Tobias Züst, Susan R. Strickler, Adrian F. Powell, Makenzie E. Mabry, Hong An, Somayeh Karami-Boozhani, A. York, Cynthia K. Holland, 宏民楊, Matthias Erb, Georg Petschenka, José M. Gómez, Francisco Perfectti, Caroline Müller, J. Chris Pires, Lukas A. Mueller, Georg Jander	2020	47
10	Evolution of Lomandroideae: Multiple origins of polyploidy and biome occupancy in Australia Molecular Phylogenetics and Evolution ·Bee F. Gunn, Daniel J. Murphy, Neville G Walsh, John G. Conran, J. Chris Pires, Terry Desmond Macfarlane, Joanne L. Birch	2020	19
11	The renaissance of comparative biochemistry American Journal of Botany ·Stacey D. Smith, Ruthie Angelovici, Karolina Heyduk, Hiroshi Maéda, Gaurav D. Moghe, J. Chris Pires, Joshua R. Widhalm, Jennifer H. Wisecaver	2019	4
12	Usability of reference-free transcriptome assemblies for detection of differential expression: a case study on Aethionema arabicum dimorphic seeds BMC Genomics ·Per K.I. Wilhelmsson, Francisco Emmanuel Labrada-Moncada, Noé Fernández‐Pozo, Kai Graeber, Kristian K Ullrich, Waheed Arshad, Safina Khan, Johannes A. Hofberger, Iwona Kozikowska, Patrick P. Edger, J. Chris Pires, M. Eric Schranz, Gerhard Leubner‐Metzger, Stefan A. Rensing	2019	18
13	Phylotranscriptomic analysis and genome evolution of the Cypripedioideae (Orchidaceae) American Journal of Botany ·Riccardo Zappacosta, Michael R. McKain, W. Kopryk, Tomohisa Yukawa, Melissa McCormick, Richard P. Shefferson, Ann Smithson, Jim Leebens‐Mack, J. Chris Pires	2018	27
14	Genomic inferences of domestication events are corroborated by written records in Brassica rapa Molecular Ecology ·Xinshuai Qi, Hong An, Aaron P. Ragsdale, Lara Nollen, Ryan N. Gutenkunst, J. Chris Pires, Michael S. Barker	2017	45
15	Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus Plant Biotechnology Journal ·Bhavna Hurgobin, Agnieszka A. Golicz, Philipp E. Bayer, Chon‐Kit Kenneth Chan, Soodeh Tirnaz, Aria Dolatabadian, Sarah Schießl, Birgit Samans, Juan D. Montenegro, Isobel A. P. Parkin, J. Chris Pires, Boulos Chalhoub, Graham J.W. King, Rod J. Snowdon, Jacqueline Batley, David Edwards	2017	182
16	Subgenome Dominance in an Interspecific Hybrid, Synthetic Allopolyploid, and a 140-Year-Old Naturally Established Neo-Allopolyploid Monkeyflower The Plant Cell ·Patrick P. Edger, Ronald D. Smith, Michael R. McKain, Arielle M. Cooley, Mario Vallejo‐Marín, Yao‐Wu Yuan, Adam J. Bewick, Lexiang Ji, Adrian E. Platts, Megan J. Bowman, Kevin L. Childs, Jacob D. Washburn, Robert J. Schmitz, Gregory D. Smith, J. Chris Pires, Joshua R. Puzey	2017	173
17	Retrotransposon Proliferation Coincident with the Evolution of Dioecy in Asparagus G3 Genes Genomes Genetics ·Alex Harkess, Francesco Mercati, Loredana Abbate, Michael R. McKain, J. Chris Pires, T. Sala, Francesco Sunseri, Asdrúbal Falavigna, Jim Leebens‐Mack	2016	19
18	Evolution of Asparagus L. (Asparagaceae): Out-of-South-Africa and multiple origins of sexual dimorphism Molecular Phylogenetics and Evolution ·XIAN-KUN ZHAGN, Gitte Petersen, حمد سليمان البازعي, Yanis Bouchenak‐Khelladi, Jim Leebens‐Mack, J. Chris Pires, H. Peter Linder, Ole Seberg	2015	39
19	Assembling the Tree of the Monocotyledons: Plastome Sequence Phylogeny and Evolution of Poales¹ Annals of the Missouri Botanical Garden ·Thomas J. Givnish, Mercedes Ames, Joel R. McNeal, Michael R. McKain, J. Wang, Claude W. dePamphilis, Sean W. Graham, J. Chris Pires, Dennis Wm. Stevenson, Wendy B. Zomlefer, Barbara G. Briggs, Melvin R. Duvall, Michael J. Moore, 仁志谷, Pamela S. Soltis, Kevin R. Thiele, Jim Leebens‐Mack	2010	189
20	Genomic Changes in Resynthesized Brassica napus and Their Effect on Gene Expression and Phenotype The Plant Cell ·Robert T. Gaeta, J. Chris Pires, Federico Iñiguez-Luy, Enrique J. León, T. C. Osborn	2007	491

About J. Chris Pires

J. Chris Pires is a scholar working on Ecology, Evolution, Behavior and Systematics, Plant Science, Molecular Biology, Genetics and Biochemistry, having authored 144 papers that have together received 11.5k indexed citations. Recurring topics across this work include Chromosomal and Genetic Variations (64 papers), Genomics and Phylogenetic Studies (39 papers), Plant Diversity and Evolution (32 papers), Plant Disease Resistance and Genetics (23 papers), Plant and Fungal Species Descriptions (22 papers), Plant tissue culture and regeneration (20 papers), Genetic diversity and population structure (19 papers) and Photosynthetic Processes and Mechanisms (14 papers). The work is most often cited by research in Plant Science (7.9k citations), Ecology, Evolution, Behavior and Systematics (3.4k citations), Molecular Biology (7.0k citations), Genetics (2.3k citations) and Horticulture (55 citations). J. Chris Pires has collaborated with scholars based in United States, Canada and China. Frequent co-authors include Patrick P. Edger, Robert T. Gaeta, T. C. Osborn, Gavin C. Conant, Zhiyong Xiong, Kenneth J. Sytsma, Enrique J. León, Pamela S. Soltis, James A. Birchler and Michael R. McKain. Their work appears in journals such as American Journal of Botany, New Phytologist, Genetics, Genome Biology and Evolution and Frontiers in Plant Science.

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