Ikuo Fukuda

1.2k total citations
45 papers, 834 citations indexed

About

Ikuo Fukuda is a scholar working on Molecular Biology, Atomic and Molecular Physics, and Optics and Statistical and Nonlinear Physics. According to data from OpenAlex, Ikuo Fukuda has authored 45 papers receiving a total of 834 indexed citations (citations by other indexed papers that have themselves been cited), including 28 papers in Molecular Biology, 23 papers in Atomic and Molecular Physics, and Optics and 9 papers in Statistical and Nonlinear Physics. Recurrent topics in Ikuo Fukuda's work include Protein Structure and Dynamics (21 papers), Spectroscopy and Quantum Chemical Studies (19 papers) and Statistical Mechanics and Entropy (6 papers). Ikuo Fukuda is often cited by papers focused on Protein Structure and Dynamics (21 papers), Spectroscopy and Quantum Chemical Studies (19 papers) and Statistical Mechanics and Entropy (6 papers). Ikuo Fukuda collaborates with scholars based in Japan, France and Germany. Ikuo Fukuda's co-authors include Haruki Nakamura, Narutoshi Kamiya, Kota Kasahara, Yasushige Yonezawa, Junichi Higo, Gert‐Jan Bekker, Yoshifumi Fukunishi, Shun Sakuraba, Kei Moritsugu and Handong Wang and has published in prestigious journals such as The Journal of Chemical Physics, Bioinformatics and PLoS ONE.

In The Last Decade

Ikuo Fukuda

43 papers receiving 829 citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Ikuo Fukuda Japan 17 532 261 170 130 86 45 834
Zhaoxi Sun China 19 657 1.2× 215 0.8× 248 1.5× 122 0.9× 175 2.0× 69 1.0k
Piotr Setny Poland 16 740 1.4× 260 1.0× 195 1.1× 124 1.0× 132 1.5× 38 1.1k
Yasushige Yonezawa Japan 16 579 1.1× 228 0.9× 225 1.3× 131 1.0× 63 0.7× 54 915
David D. L. Minh United States 16 608 1.1× 166 0.6× 226 1.3× 65 0.5× 121 1.4× 50 884
Simone Marsili Italy 14 535 1.0× 226 0.9× 167 1.0× 61 0.5× 62 0.7× 23 811
Frank M. DiCapua United States 9 854 1.6× 322 1.2× 229 1.3× 153 1.2× 212 2.5× 9 1.3k
Tim N. Heinz Switzerland 6 648 1.2× 262 1.0× 216 1.3× 119 0.9× 84 1.0× 8 961
Chigusa Kobayashi Japan 22 741 1.4× 289 1.1× 298 1.8× 142 1.1× 92 1.1× 37 1.1k
Alexey K. Mazur France 23 1.0k 1.9× 236 0.9× 215 1.3× 149 1.1× 100 1.2× 63 1.4k

Countries citing papers authored by Ikuo Fukuda

Since Specialization
Citations

This map shows the geographic impact of Ikuo Fukuda's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Ikuo Fukuda with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Ikuo Fukuda more than expected).

Fields of papers citing papers by Ikuo Fukuda

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Ikuo Fukuda. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Ikuo Fukuda. The network helps show where Ikuo Fukuda may publish in the future.

Co-authorship network of co-authors of Ikuo Fukuda

This figure shows the co-authorship network connecting the top 25 collaborators of Ikuo Fukuda. A scholar is included among the top collaborators of Ikuo Fukuda based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Ikuo Fukuda. Ikuo Fukuda is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Fukuda, Ikuo, Kei Moritsugu, Junichi Higo, & Yoshifumi Fukunishi. (2023). A cutoff-based method with charge-distribution-data driven pair potentials for efficiently estimating electrostatic interactions in molecular systems. The Journal of Chemical Physics. 159(23).
2.
Higo, Junichi, Gert‐Jan Bekker, Narutoshi Kamiya, Ikuo Fukuda, & Yoshifumi Fukunishi. (2023). Binding free-energy landscapes of small molecule binder and non-binder to FMN riboswitch: All-atom molecular dynamics. Biophysics and Physicobiology. 20(4). n/a–n/a. 1 indexed citations
3.
Fukuda, Ikuo & Haruki Nakamura. (2022). Non-Ewald methods for evaluating the electrostatic interactions of charge systems: similarity and difference. Biophysical Reviews. 14(6). 1315–1340. 6 indexed citations
4.
Bekker, Gert‐Jan, Ikuo Fukuda, Junichi Higo, Yoshifumi Fukunishi, & Narutoshi Kamiya. (2021). Cryptic-site binding mechanism of medium-sized Bcl-xL inhibiting compounds elucidated by McMD-based dynamic docking simulations. Scientific Reports. 11(1). 5046–5046. 16 indexed citations
5.
Fukuda, Ikuo & Kei Moritsugu. (2020). Temperature–energy-space sampling molecular dynamics: deterministic and single-replica method utilizing continuous temperature system. Journal of Physics A Mathematical and Theoretical. 53(37). 375004–375004. 1 indexed citations
6.
Kasahara, Kota, Shun Sakuraba, & Ikuo Fukuda. (2018). Enhanced Sampling of Molecular Dynamics Simulations of a Polyalanine Octapeptide: Effects of the Periodic Boundary Conditions on Peptide Conformation. The Journal of Physical Chemistry B. 122(9). 2495–2503. 19 indexed citations
7.
Bekker, Gert‐Jan, Narutoshi Kamiya, Mitsugu Araki, et al.. (2017). Accurate Prediction of Complex Structure and Affinity for a Flexible Protein Receptor and Its Inhibitor. Journal of Chemical Theory and Computation. 13(6). 2389–2399. 41 indexed citations
8.
Kasahara, Kota, Masaaki Shiina, Ikuo Fukuda, Kazuhiro Ogata, & Haruki Nakamura. (2017). Molecular mechanisms of cooperative binding of transcription factors Runx1–CBFβ–Ets1 on the TCRα gene enhancer. PLoS ONE. 12(2). e0172654–e0172654. 8 indexed citations
9.
Fukuda, Ikuo & Kei Moritsugu. (2016). Coupled Nosé–Hoover equations of motions without time scaling. Journal of Physics A Mathematical and Theoretical. 50(1). 15002–15002. 2 indexed citations
10.
Fukuda, Ikuo. (2015). Development of New Non-Ewald Method in Molecular Dynamics Calculation. Seibutsu Butsuri. 55(1). 37–39.
11.
Fukuda, Ikuo & Kei Moritsugu. (2015). Double density dynamics: realizing a joint distribution of a physical system and a parameter system. Journal of Physics A Mathematical and Theoretical. 48(45). 455001–455001. 8 indexed citations
12.
Kasahara, Kota, Ikuo Fukuda, & Haruki Nakamura. (2014). A Novel Approach of Dynamic Cross Correlation Analysis on Molecular Dynamics Simulations and Its Application to Ets1 Dimer–DNA Complex. PLoS ONE. 9(11). e112419–e112419. 111 indexed citations
13.
Fukuda, Ikuo. (2013). Zero-multipole summation method for efficiently estimating electrostatic interactions in molecular system. The Journal of Chemical Physics. 139(17). 174107–174107. 34 indexed citations
14.
Kamiya, Narutoshi, et al.. (2013). Molecular Dynamics Simulations of Double-Stranded DNA in an Explicit Solvent Model with the Zero-Dipole Summation Method. PLoS ONE. 8(10). e76606–e76606. 22 indexed citations
15.
Fukuda, Ikuo & Haruki Nakamura. (2012). Non-Ewald methods: theory and applications to molecular systems. Biophysical Reviews. 4(3). 161–170. 53 indexed citations
16.
Fukuda, Ikuo, Yasushige Yonezawa, & Haruki Nakamura. (2008). Consistent Molecular Dynamics Scheme Applying the Wolf Summation for Calculating Electrostatic Interaction of Particles. Journal of the Physical Society of Japan. 77(11). 114301–114301. 22 indexed citations
17.
Fukuda, Ikuo & Haruki Nakamura. (2005). Molecular dynamics sampling scheme realizing multiple distributions. Physical Review E. 71(4). 46708–46708. 4 indexed citations
18.
Fukuda, Ikuo & Haruki Nakamura. (2003). Deterministic generation of the Boltzmann–Gibbs distribution and the free energy calculation from the Tsallis distribution. Chemical Physics Letters. 382(3-4). 367–373. 8 indexed citations
19.
Fukuda, Ikuo & Haruki Nakamura. (2002). Tsallis dynamics using the Nosé-Hoover approach. Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics. 65(2). 26105–26105. 23 indexed citations
20.
Fukuda, Ikuo. (2001). Application of the Nosé-Hoover method to optimization problems. Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics. 64(1). 16203–16203. 6 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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