Piotr Setny

1.5k total citations · 1 hit paper
38 papers, 1.1k citations indexed

About

Piotr Setny is a scholar working on Molecular Biology, Atomic and Molecular Physics, and Optics and Materials Chemistry. According to data from OpenAlex, Piotr Setny has authored 38 papers receiving a total of 1.1k indexed citations (citations by other indexed papers that have themselves been cited), including 33 papers in Molecular Biology, 15 papers in Atomic and Molecular Physics, and Optics and 7 papers in Materials Chemistry. Recurrent topics in Piotr Setny's work include Protein Structure and Dynamics (17 papers), Spectroscopy and Quantum Chemical Studies (15 papers) and Lipid Membrane Structure and Behavior (11 papers). Piotr Setny is often cited by papers focused on Protein Structure and Dynamics (17 papers), Spectroscopy and Quantum Chemical Studies (15 papers) and Lipid Membrane Structure and Behavior (11 papers). Piotr Setny collaborates with scholars based in Poland, Germany and United States. Piotr Setny's co-authors include J. Andrew McCammon, Riccardo Baron, Martin Zacharias, Joanna Trylska, Joachim Dzubiella, Maciej Geller, Julia Romanowska, Peter M. Kekenes–Huskey, Ranjit Prasad Bahadur and Damian Neubauer and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Journal of the American Chemical Society and Nucleic Acids Research.

In The Last Decade

Piotr Setny

38 papers receiving 1.1k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Discovering highly potent antimicrobial peptides with deep generative model HydrAMP

2023 98 citations Marcin Możejko, Marta Bauer et al. Nature Communications profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Piotr Setny Poland	16	740	260	195	132	124	38	1.1k
Ànna Pavlova United States	20	756 1.0×	169 0.7×	188 1.0×	149 1.1×	195 1.6×	44	1.4k
Volker Knecht Germany	24	1.0k 1.4×	317 1.2×	117 0.6×	62 0.5×	62 0.5×	47	1.4k
Chuan Li United States	11	657 0.9×	161 0.6×	160 0.8×	109 0.8×	76 0.6×	19	994
Lukas D. Schuler Switzerland	11	755 1.0×	318 1.2×	244 1.3×	71 0.5×	127 1.0×	14	1.2k
Andreas Kukol United Kingdom	23	1.2k 1.6×	202 0.8×	187 1.0×	88 0.7×	293 2.4×	47	1.7k
Yuri Gerelli France	22	741 1.0×	224 0.9×	177 0.9×	44 0.3×	83 0.7×	63	1.2k
Vincent Kräutler Switzerland	8	663 0.9×	226 0.9×	281 1.4×	77 0.6×	117 0.9×	9	966
Tim N. Heinz Switzerland	6	648 0.9×	262 1.0×	216 1.1×	84 0.6×	119 1.0×	8	961
Atsuo Tamura Japan	22	1.3k 1.7×	184 0.7×	437 2.2×	80 0.6×	210 1.7×	65	1.8k
Hyung‐June Woo United States	14	663 0.9×	228 0.9×	446 2.3×	165 1.3×	171 1.4×	24	1.3k

Countries citing papers authored by Piotr Setny

Since Specialization

Citations

This map shows the geographic impact of Piotr Setny's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Piotr Setny with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Piotr Setny more than expected).

Fields of papers citing papers by Piotr Setny

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Piotr Setny. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Piotr Setny. The network helps show where Piotr Setny may publish in the future.

Co-authorship network of co-authors of Piotr Setny

This figure shows the co-authorship network connecting the top 25 collaborators of Piotr Setny. A scholar is included among the top collaborators of Piotr Setny based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Piotr Setny. Piotr Setny is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Orlikowska-Rzeznik, Hanna, et al.. (2024). Dehydration of Lipid Membranes Drives Redistribution of Cholesterol Between Lateral Domains. The Journal of Physical Chemistry Letters. 15(16). 4515–4522. 3 indexed citations

Setny, Piotr, et al.. (2023). Two modes of fusogenic action for influenza virus fusion peptide. PLoS Computational Biology. 19(5). e1011174–e1011174. 4 indexed citations

Możejko, Marcin, Marta Bauer, Damian Neubauer, et al.. (2023). Discovering highly potent antimicrobial peptides with deep generative model HydrAMP. Nature Communications. 14(1). 1453–1453. 98 indexed citations breakdown →

Setny, Piotr, et al.. (2022). Membrane-Bound Configuration and Lipid Perturbing Effects of Hemagglutinin Subunit 2 N-Terminus Investigated by Computer Simulations. Frontiers in Molecular Biosciences. 9. 826366–826366. 4 indexed citations

Setny, Piotr, et al.. (2021). Entropy‐based distance cutoff for protein internal contact networks. Proteins Structure Function and Bioinformatics. 89(10). 1333–1339. 4 indexed citations

Setny, Piotr. (2020). Conserved internal hydration motifs in protein kinases. Proteins Structure Function and Bioinformatics. 88(12). 1578–1591. 4 indexed citations

Kazimierczuk, Krzysztof, et al.. (2020). Restriction of S-adenosylmethionine conformational freedom by knotted protein binding sites. PLoS Computational Biology. 16(5). e1007904–e1007904. 14 indexed citations

Weiß, Richard, Piotr Setny, & Joachim Dzubiella. (2017). Principles for Tuning Hydrophobic Ligand–Receptor Binding Kinetics. Journal of Chemical Theory and Computation. 13(6). 3012–3019. 10 indexed citations

Setny, Piotr, et al.. (2017). Explicit Solvent Hydration Benchmark for Proteins with Application to the PBSA Method. Journal of Chemical Theory and Computation. 13(6). 2762–2776. 2 indexed citations

10.

Worch, Remigiusz, et al.. (2016). Three conserved C-terminal residues of influenza fusion peptide alter its behavior at the membrane interface. Biochimica et Biophysica Acta (BBA) - General Subjects. 1861(2). 97–105. 17 indexed citations

11.

Setny, Piotr. (2015). Prediction of Water Binding to Protein Hydration Sites with a Discrete, Semiexplicit Solvent Model. Journal of Chemical Theory and Computation. 11(12). 5961–5972. 13 indexed citations

12.

Setny, Piotr, et al.. (2013). Mapping the Spatial Neighborhood of the Regulatory 6S RNA Bound to Escherichia coli RNA Polymerase Holoenzyme. Journal of Molecular Biology. 425(19). 3649–3661. 17 indexed citations

13.

Setny, Piotr, Riccardo Baron, Peter M. Kekenes–Huskey, J. Andrew McCammon, & Joachim Dzubiella. (2013). Solvent fluctuations in hydrophobic cavity–ligand binding kinetics. Proceedings of the National Academy of Sciences. 110(4). 1197–1202. 72 indexed citations

14.

Setny, Piotr, Ranjit Prasad Bahadur, & Martin Zacharias. (2012). Protein-DNA docking with a coarse-grained force field. BMC Bioinformatics. 13(1). 228–228. 28 indexed citations

15.

Setny, Piotr & Martin Zacharias. (2011). A coarse-grained force field for Protein–RNA docking. Nucleic Acids Research. 39(21). 9118–9129. 54 indexed citations

16.

Setny, Piotr & Joanna Trylska. (2009). Search for Novel Aminoglycosides by Combining Fragment-Based Virtual Screening and 3D-QSAR Scoring. Journal of Chemical Information and Modeling. 49(2). 390–400. 20 indexed citations

17.

Cheng, Li‐Tien, Zhongming Wang, Piotr Setny, et al.. (2009). Interfaces and hydrophobic interactions in receptor-ligand systems: A level-set variational implicit solvent approach. The Journal of Chemical Physics. 131(14). 144102–144102. 36 indexed citations

18.

Romanowska, Julia, Piotr Setny, & Joanna Trylska. (2008). Molecular Dynamics Study of the Ribosomal A-Site. The Journal of Physical Chemistry B. 112(47). 15227–15243. 44 indexed citations

19.

Setny, Piotr & Maciej Geller. (2006). Water properties inside nanoscopic hydrophobic pocket studied by computer simulations. The Journal of Chemical Physics. 125(14). 144717–144717. 31 indexed citations

20.

Setny, Piotr & Maciej Geller. (2004). Refinement of X‐ray data on dual cosubstrate specificity of CK2 kinase by free energy calculations based on molecular dynamics simulation. Proteins Structure Function and Bioinformatics. 58(3). 511–517. 5 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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