Gaoqi Weng

2.2k total citations · 2 hit papers
25 papers, 1.5k citations indexed

About

Gaoqi Weng is a scholar working on Molecular Biology, Computational Theory and Mathematics and Materials Chemistry. According to data from OpenAlex, Gaoqi Weng has authored 25 papers receiving a total of 1.5k indexed citations (citations by other indexed papers that have themselves been cited), including 22 papers in Molecular Biology, 13 papers in Computational Theory and Mathematics and 6 papers in Materials Chemistry. Recurrent topics in Gaoqi Weng's work include Computational Drug Discovery Methods (13 papers), Protein Structure and Dynamics (10 papers) and Chemical Synthesis and Analysis (7 papers). Gaoqi Weng is often cited by papers focused on Computational Drug Discovery Methods (13 papers), Protein Structure and Dynamics (10 papers) and Chemical Synthesis and Analysis (7 papers). Gaoqi Weng collaborates with scholars based in China, Macao and United States. Gaoqi Weng's co-authors include Tingjun Hou, Ercheng Wang, Zhe Wang, Dan Li, Feng Zhu, Dongsheng Cao, Hui Liu, Huiyong Sun, Yu Kang and Chao Shen and has published in prestigious journals such as Nucleic Acids Research, Journal of Medicinal Chemistry and Physical Chemistry Chemical Physics.

In The Last Decade

Gaoqi Weng

24 papers receiving 1.5k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

HawkDock: a web server to predict and analyze the protein–protein complex based on computational docking and MM/GBSA

2019 420 citations Gaoqi Weng, Ercheng Wang et al. Nucleic Acids Research profile →
PROTAC-DB 3.0: an updated database of PROTACs with extended pharmacokinetic parameters

2024 44 citations Jingxuan Ge, Shimeng Li et al. Nucleic Acids Research profile →

Peers

Countries citing papers authored by Gaoqi Weng

Since Specialization

Citations

This map shows the geographic impact of Gaoqi Weng's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Gaoqi Weng with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Gaoqi Weng more than expected).

Fields of papers citing papers by Gaoqi Weng

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Gaoqi Weng. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Gaoqi Weng. The network helps show where Gaoqi Weng may publish in the future.

Co-authorship network of co-authors of Gaoqi Weng

This figure shows the co-authorship network connecting the top 25 collaborators of Gaoqi Weng. A scholar is included among the top collaborators of Gaoqi Weng based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Gaoqi Weng. Gaoqi Weng is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Improving the predictive performance of binding affinities and poses for protein–cyclic peptide complexes through fine-tuned MM/PBSA(GBSA)-based methods 2025 ·Briefings in Bioinformatics ·(unknown), Jianxiang Huang, Gaoqi Weng, Dejun Jiang, (unknown), Yu Kang, Tingjun Hou	0
2	HawkDock version 2: an updated web server to predict and analyze the structures of protein–protein complexes 2025 ·Nucleic Acids Research ·Xujun Zhang, (unknown), Gaoqi Weng, Chao Shen, Odin Zhang, Mingquan Liu, Chen Zhang, (unknown), Jike Wang, Xiaorui Wang, Hongyan Du, Hui Zhang, (unknown), Ercheng Wang, Tingjun Hou	2
3	Durian: A Comprehensive Benchmark for Structure-Based 3D Molecular Generation 2024 ·Journal of Chemical Information and Modeling ·(unknown), (unknown), Odin Zhang, Gaoqi Weng, Hui Zhang, (unknown), Haitao Lin, Yufei Huang, (unknown), Dan Li, Tingjun Hou, Yu Kang	3
4	Genetic Algorithm-Based Receptor Ligand: A Genetic Algorithm-Guided Generative Model to Boost the Novelty and Drug-Likeness of Molecules in a Sampling Chemical Space 2024 ·Journal of Chemical Information and Modeling ·Mingyang Wang, (unknown), Jike Wang, Gaoqi Weng, Yu Kang, Peichen Pan, Dan Li, Yafeng Deng, Xiaojun Yao, Zhitong Bing, Chang‐Yu Hsieh, Tingjun Hou	8
5	RediscMol: Benchmarking Molecular Generation Models in Biological Properties 2024 ·Journal of Medicinal Chemistry ·Gaoqi Weng, (unknown), (unknown), Haotian Zhang, Liwei Liu, Tingjun Hou, Yu Kang	10
6	PROTAC-DB 3.0: an updated database of PROTACs with extended pharmacokinetic parameters breakdown → 2024 ·Nucleic Acids Research ·Jingxuan Ge, Shimeng Li, Gaoqi Weng, Huating Wang, (unknown), Huiyong Sun, Yafeng Deng, (unknown), Dan Li, Tingjun Hou	44
7	Rational design of supramolecular self-assembly sensor for living cell imaging of HDAC1 and its application in high-throughput screening 2023 ·Biosensors and Bioelectronics ·Min Li, Huijuan Yu, (unknown), Xin Li, Shiqing Huang, Xiaogang Liu, Gaoqi Weng, Lei Xu, Tingjun Hou, Dong‐Sheng Guo, Yi Wang	8
8	Learning on topological surface and geometric structure for 3D molecular generation 2023 ·Nature Computational Science ·Odin Zhang, Tianyue Wang, Gaoqi Weng, Dejun Jiang, Ning Wang, Xiaorui Wang, (unknown), Jialu Wu, Ercheng Wang, Guangyong Chen, Yafeng Deng, Peichen Pan, Yu Kang, Chang‐Yu Hsieh, Tingjun Hou	36
9	ReMODE: a deep learning-based web server for target-specific drug design 2022 ·Journal of Cheminformatics ·Mingyang Wang, Jike Wang, Gaoqi Weng, Yu Kang, Peichen Pan, Dan Li, Yafeng Deng, Honglin Li, Chang‐Yu Hsieh, Tingjun Hou	4
10	PROTAC-DB 2.0: an updated database of PROTACs 2022 ·Nucleic Acids Research ·Gaoqi Weng, (unknown), Dongsheng Cao, Hongyan Du, Chao Shen, Yafeng Deng, Qiaojun He, Bo Yang, Dan Li, Tingjun Hou	91
11	Deep learning approaches for de novo drug design: An overview 2021 ·Current Opinion in Structural Biology ·Mingyang Wang, Zhe Wang, Huiyong Sun, Jike Wang, Chao Shen, Gaoqi Weng, Xin Chai, Honglin Li, Dongsheng Cao, Tingjun Hou	86
12	ASFP (Artificial Intelligence based Scoring Function Platform): a web server for the development of customized scoring functions 2021 ·Journal of Cheminformatics ·Xujun Zhang, Chao Shen, Xueying Guo, Zhe Wang, Gaoqi Weng, (unknown), Gaoang Wang, Qiaojun He, Bo Yang, Dongsheng Cao, Tingjun Hou	10
13	Accuracy or novelty: what can we gain from target-specific machine-learning-based scoring functions in virtual screening? 2021 ·Briefings in Bioinformatics ·Chao Shen, Gaoqi Weng, Xujun Zhang, Elaine Lai‐Han Leung, Xiaojun Yao, Jinping Pang, Xin Chai, Dan Li, Ercheng Wang, Dongsheng Cao, Tingjun Hou	33
14	Integrative Modeling of PROTAC-Mediated Ternary Complexes 2021 ·Journal of Medicinal Chemistry ·Gaoqi Weng, Dan Li, Yu Kang, Tingjun Hou	79
15	Comprehensive Evaluation of Fourteen Docking Programs on Protein–Peptide Complexes 2020 ·Journal of Chemical Theory and Computation ·Gaoqi Weng, Junbo Gao, Zhe Wang, Ercheng Wang, Xueping Hu, Xiaojun Yao, Dongsheng Cao, Tingjun Hou	119
16	CovalentInDB: a comprehensive database facilitating the discovery of covalent inhibitors 2020 ·Nucleic Acids Research ·Hongyan Du, Junbo Gao, Gaoqi Weng, Junjie Ding, Xin Chai, Jinping Pang, Yu Kang, Dan Li, Dongsheng Cao, Tingjun Hou	53
17	PROTAC-DB: an online database of PROTACs 2020 ·Nucleic Acids Research ·Gaoqi Weng, Chao Shen, Dongsheng Cao, Junbo Gao, Xiaowu Dong, Qiaojun He, Bo Yang, Dan Li, Jian Wu, Tingjun Hou	140
18	Development and Evaluation of MM/GBSA Based on a Variable Dielectric GB Model for Predicting Protein–Ligand Binding Affinities 2020 ·Journal of Chemical Information and Modeling ·Ercheng Wang, (unknown), Junmei Wang, Gaoqi Weng, Huiyong Sun, Zhe Wang, Yu Kang, Tingjun Hou	42
19	<p>Identification of an Activating Mutation in the Extracellular Domain of HER2 Conferring Resistance to Pertuzumab</p> 2019 ·OncoTargets and Therapy ·Ying Zhang, (unknown), (unknown), Gaoqi Weng, (unknown), Xiaoyue Yang, Yingchun Xu, Liqiang Pan, Tingjun Hou, Zhan Zhou, Shuqing Chen	16
20	Assessing the performance of MM/PBSA and MM/GBSA methods. 9. Prediction reliability of binding affinities and binding poses for protein–peptide complexes 2019 ·Physical Chemistry Chemical Physics ·Gaoqi Weng, Ercheng Wang, Fu Chen, Huiyong Sun, Zhe Wang, Tingjun Hou	109

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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