Fabrice Lopez

3.1k total citations · 1 hit paper
24 papers, 1.3k citations indexed

About

Fabrice Lopez is a scholar working on Molecular Biology, Genetics and Plant Science. According to data from OpenAlex, Fabrice Lopez has authored 24 papers receiving a total of 1.3k indexed citations (citations by other indexed papers that have themselves been cited), including 23 papers in Molecular Biology, 3 papers in Genetics and 3 papers in Plant Science. Recurrent topics in Fabrice Lopez's work include Bioinformatics and Genomic Networks (6 papers), RNA Research and Splicing (6 papers) and Gene Regulatory Network Analysis (5 papers). Fabrice Lopez is often cited by papers focused on Bioinformatics and Genomic Networks (6 papers), RNA Research and Splicing (6 papers) and Gene Regulatory Network Analysis (5 papers). Fabrice Lopez collaborates with scholars based in France, United States and Portugal. Fabrice Lopez's co-authors include Olivier Poirot, Jean‐Michel Claverie, Stéphane Audic, Aurélie Bergon, Daniel Gautheret, Benoît Ballester, Pierre de Langen, Fayrouz Hammal, Rob M. Ewing and Denis Thieffry and has published in prestigious journals such as Nucleic Acids Research, Journal of Biological Chemistry and The EMBO Journal.

In The Last Decade

Fabrice Lopez

24 papers receiving 1.3k citations

Hit Papers

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What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

ReMap 2022: a database of Human, Mouse, Drosophila and Arabidopsis regulatory regions from an integrative analysis of DNA-binding sequencing experiments

2021 202 citations Fayrouz Hammal, Pierre de Langen et al. Nucleic Acids Research profile →

Author Peers

Peers are selected by citation overlap in the author's most active subfields. citations · hero ref

Author						Papers	Cites
Fabrice Lopez	1.1k	214	158	141	55	24	1.3k
D. Hernandez‐Verdun	1.4k 1.3×	307 1.4×	199 1.3×	118 0.8×	73 1.3×	40	1.7k
Daniel Tabas‐Madrid	589 0.6×	94 0.4×	92 0.6×	174 1.2×	71 1.3×	14	852
Osamu Ogasawara	898 0.8×	74 0.3×	143 0.9×	157 1.1×	108 2.0×	32	1.2k
Arthur Wüster	992 0.9×	111 0.5×	456 2.9×	214 1.5×	133 2.4×	25	1.5k
Nehmé Saksouk	1.7k 1.6×	241 1.1×	155 1.0×	381 2.7×	87 1.6×	25	2.2k
Moisès Burset	1.3k 1.2×	111 0.5×	142 0.9×	110 0.8×	47 0.9×	15	1.6k
Swarnaseetha Adusumalli	624 0.6×	109 0.5×	408 2.6×	115 0.8×	49 0.9×	8	1.1k
Yafeng Zhu	642 0.6×	98 0.5×	127 0.8×	144 1.0×	93 1.7×	28	1.0k
Paul Labhart	1.5k 1.4×	193 0.9×	264 1.7×	160 1.1×	100 1.8×	51	1.7k
Monique Zahn‐Zabal	906 0.8×	94 0.4×	244 1.5×	35 0.2×	104 1.9×	22	1.1k

Countries citing papers authored by Fabrice Lopez

Since Specialization

Citations

This map shows the geographic impact of Fabrice Lopez's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Fabrice Lopez with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Fabrice Lopez more than expected).

Fields of papers citing papers by Fabrice Lopez

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Fabrice Lopez. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Fabrice Lopez. The network helps show where Fabrice Lopez may publish in the future.

Co-authorship network of co-authors of Fabrice Lopez

This figure shows the co-authorship network connecting the top 25 collaborators of Fabrice Lopez. A scholar is included among the top collaborators of Fabrice Lopez based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Fabrice Lopez. Fabrice Lopez is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Lopez, Fabrice, et al.. (2023). ChagasDB: 80 years of publicly available data on the molecular host response to Trypanosoma cruzi infection in a single database. Database. 2023. 1 indexed citations

Hammal, Fayrouz, Pierre de Langen, Aurélie Bergon, Fabrice Lopez, & Benoît Ballester. (2021). ReMap 2022: a database of Human, Mouse, Drosophila and Arabidopsis regulatory regions from an integrative analysis of DNA-binding sequencing experiments. Nucleic Acids Research. 50(D1). D316–D325. 202 indexed citations breakdown →

Reynders, Ana, et al.. (2021). Introducing the novel Cytoscape app TimeNexus to analyze time-series data using temporal MultiLayer Networks (tMLNs). Scientific Reports. 11(1). 13691–13691. 6 indexed citations

Hennebique, Aurélie, et al.. (2020). Genomic trajectories to fluoroquinolone resistance in Francisella tularensis subsp. holarctica live vaccine strain. International Journal of Antimicrobial Agents. 56(6). 106153–106153. 4 indexed citations

Turchi, Laurent, Aurélie Bergon, Hélène Holota, et al.. (2016). A Positive Feed-forward Loop Associating EGR1 and PDGFA Promotes Proliferation and Self-renewal in Glioblastoma Stem Cells. Journal of Biological Chemistry. 291(20). 10684–10699. 37 indexed citations

Gaucher, Jonathan, Fayçal Boussouar, Emilie Montellier, et al.. (2012). Bromodomain‐dependent stage‐specific male genome programming by Brdt. The EMBO Journal. 31(19). 3809–3820. 187 indexed citations

Lepoivre, Cyrille, Aurélie Bergon, Fabrice Lopez, et al.. (2012). TranscriptomeBrowser 3.0: introducing a new compendium of molecular interactions and a new visualization tool for the study of gene regulatory networks. BMC Bioinformatics. 13(1). 19–19. 15 indexed citations

Fauré, Adrien, Aurélien Naldi, Fabrice Lopez, et al.. (2009). Modular logical modelling of the budding yeast cell cycle. Molecular BioSystems. 5(12). 1787–1796. 43 indexed citations

Naldi, Aurélien, Duncan Bérenguier, Adrien Fauré, et al.. (2009). Logical modelling of regulatory networks with GINsim 2.3. Biosystems. 97(2). 134–139. 112 indexed citations

10.

Lopez, Fabrice, Julien Textoris, Aurélie Bergon, et al.. (2008). TranscriptomeBrowser: A Powerful and Flexible Toolbox to Explore Productively the Transcriptional Landscape of the Gene Expression Omnibus Database. PLoS ONE. 3(12). e4001–e4001. 19 indexed citations

11.

Moucadel, Virginie, Fabrice Lopez, Takeshi Ara, Philippe Benech, & Daniel Gautheret. (2007). Beyond the 3′ end: experimental validation of extended transcript isoforms. Nucleic Acids Research. 35(6). 1947–1957. 16 indexed citations

12.

Lopez, Fabrice, Samuel Granjeaud, Takeshi Ara, Badih Ghattas, & Daniel Gautheret. (2006). The disparate nature of “intergenic” polyadenylation sites. RNA. 12(10). 1794–1801. 24 indexed citations

13.

Texier, Vincent Le, Jean-Jack M. Riethoven, Vasudev Kumanduri, et al.. (2006). AltTrans: Transcript pattern variants annotated for both alternative splicing and alternative polyadenylation. BMC Bioinformatics. 7(1). 169–169. 29 indexed citations

14.

Lopez, Fabrice, et al.. (2006). AGScan: a pluggable microarray image quantification software based on the ImageJ library. Bioinformatics. 23(2). 247–248. 14 indexed citations

15.

Ara, Takeshi, Fabrice Lopez, William Ritchie, Philippe Benech, & Daniel Gautheret. (2006). Conservation of alternative polyadenylation patterns in mammalian genes. BMC Genomics. 7(1). 189–189. 40 indexed citations

16.

Lopez, Fabrice, et al.. (2003). Characterization in maize of ZmTIP2-3, a root-specific tonoplast intrinsic protein exhibiting aquaporin activity. Journal of Experimental Botany. 55(396). 539–541. 31 indexed citations

17.

Poirot, Olivier, et al.. (2000). Reverse Transcriptase-Polymerase Chain Reaction Validation of 25 “Orphan” Genes from Escherichia coli K-12 MG1655. Genome Research. 10(7). 959–966. 26 indexed citations

18.

Ewing, Rob M., et al.. (1999). Large-Scale Statistical Analyses of Rice ESTs Reveal Correlated Patterns of Gene Expression. Genome Research. 9(10). 950–959. 186 indexed citations

19.

Gautheret, Daniel, Olivier Poirot, Fabrice Lopez, Stéphane Audic, & Jean‐Michel Claverie. (1998). Alternate Polyadenylation in Human mRNAs: A Large-Scale Analysis by EST Clustering. Genome Research. 8(5). 524–530. 108 indexed citations

20.

Audic, Stéphane, Fabrice Lopez, Jean‐Michel Claverie, Olivier Poirot, & Chantal Abergel. (1997). SAmBA: An interactive software for optimizing the design of biological macromolecules crystallization experiments. Proteins Structure Function and Bioinformatics. 29(2). 252–257. 38 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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