Fabrice Lopez

3.1k total citations · 1 hit paper
24 papers, 1.3k citations indexed

About

Fabrice Lopez is a scholar working on Molecular Biology, Genetics and Plant Science. According to data from OpenAlex, Fabrice Lopez has authored 24 papers receiving a total of 1.3k indexed citations (citations by other indexed papers that have themselves been cited), including 23 papers in Molecular Biology, 3 papers in Genetics and 3 papers in Plant Science. Recurrent topics in Fabrice Lopez's work include Bioinformatics and Genomic Networks (6 papers), RNA Research and Splicing (6 papers) and Gene Regulatory Network Analysis (5 papers). Fabrice Lopez is often cited by papers focused on Bioinformatics and Genomic Networks (6 papers), RNA Research and Splicing (6 papers) and Gene Regulatory Network Analysis (5 papers). Fabrice Lopez collaborates with scholars based in France, United States and Portugal. Fabrice Lopez's co-authors include Olivier Poirot, Jean‐Michel Claverie, Stéphane Audic, Aurélie Bergon, Daniel Gautheret, Benoît Ballester, Fayrouz Hammal, Pierre de Langen, Rob M. Ewing and Aurélien Naldi and has published in prestigious journals such as Nucleic Acids Research, Journal of Biological Chemistry and The EMBO Journal.

In The Last Decade

Fabrice Lopez

24 papers receiving 1.3k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

ReMap 2022: a database of Human, Mouse, Drosophila and Arabidopsis regulatory regions from an integrative analysis of DNA-binding sequencing experiments

2021 202 citations Fayrouz Hammal, Pierre de Langen et al. Nucleic Acids Research profile →

Peers

Countries citing papers authored by Fabrice Lopez

Since Specialization

Citations

This map shows the geographic impact of Fabrice Lopez's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Fabrice Lopez with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Fabrice Lopez more than expected).

Fields of papers citing papers by Fabrice Lopez

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Fabrice Lopez. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Fabrice Lopez. The network helps show where Fabrice Lopez may publish in the future.

Co-authorship network of co-authors of Fabrice Lopez

This figure shows the co-authorship network connecting the top 25 collaborators of Fabrice Lopez. A scholar is included among the top collaborators of Fabrice Lopez based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Fabrice Lopez. Fabrice Lopez is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	ChagasDB: 80 years of publicly available data on the molecular host response to Trypanosoma cruzi infection in a single database 2023 ·Database ·(unknown), (unknown), (unknown), Fabrice Lopez, Benoît Ballester, Edécio Cunha‐Neto, Lionel Spinelli, Christophe Chevillard	1
2	Introducing the novel Cytoscape app TimeNexus to analyze time-series data using temporal MultiLayer Networks (tMLNs) 2021 ·Scientific Reports ·(unknown), Ana Reynders, Fabrice Lopez, Aziz Moqrich, Laurent Tichit, Bianca Habermann	6
3	ReMap 2022: a database of Human, Mouse, Drosophila and Arabidopsis regulatory regions from an integrative analysis of DNA-binding sequencing experiments breakdown → 2021 ·Nucleic Acids Research ·Fayrouz Hammal, Pierre de Langen, Aurélie Bergon, Fabrice Lopez, Benoît Ballester	202
4	Genomic trajectories to fluoroquinolone resistance in Francisella tularensis subsp. holarctica live vaccine strain 2020 ·International Journal of Antimicrobial Agents ·(unknown), Aurélie Hennebique, Fabrice Lopez, Nicolas Fernandez, Dominique Schneider, Max Maurin	4
5	A Positive Feed-forward Loop Associating EGR1 and PDGFA Promotes Proliferation and Self-renewal in Glioblastoma Stem Cells 2016 ·Journal of Biological Chemistry ·(unknown), Laurent Turchi, Aurélie Bergon, Hélène Holota, Samah Rekima, Fabrice Lopez, (unknown), Fabien Almairac, Denys Fontaine, Nathalie Baeza-Kallee, Ellen Van Obberghen‐Schilling, (unknown), Hervé Chneiweiss, Dominique Figarella‐Branger, Fanny Burel‐Vandenbos, Jean Imbert, Thierry Virolle	37
6	Bromodomain‐dependent stage‐specific male genome programming by Brdt 2012 ·The EMBO Journal ·Jonathan Gaucher, Fayçal Boussouar, Emilie Montellier, Sandrine Curtet, Thierry Buchou, (unknown), Patrick Héry, (unknown), Arnaud Depaux, Anne-Laure Vitte, Philippe Guardiola, (unknown), Alexandra Debernardi, Fabrice Lopez, Hélène Holota, Jean Imbert, Debra J. Wolgemuth, Matthieu Gérard, Sophie Rousseaux, Saadi Khochbin	187
7	TranscriptomeBrowser 3.0: introducing a new compendium of molecular interactions and a new visualization tool for the study of gene regulatory networks 2012 ·BMC Bioinformatics ·Cyrille Lepoivre, Aurélie Bergon, Fabrice Lopez, Narayanan B. Perumal, Catherine Nguyen, Jean Imbert, Denis Puthier	15
8	Modular logical modelling of the budding yeast cell cycle 2009 ·Molecular BioSystems ·Adrien Fauré, Aurélien Naldi, Fabrice Lopez, Claudine Chaouiya, Andrea Ciliberto, Denis Thieffry	43
9	Logical modelling of regulatory networks with GINsim 2.3 2009 ·Biosystems ·Aurélien Naldi, Duncan Bérenguier, Adrien Fauré, Fabrice Lopez, Denis Thieffry, Claudine Chaouiya	112
10	TranscriptomeBrowser: A Powerful and Flexible Toolbox to Explore Productively the Transcriptional Landscape of the Gene Expression Omnibus Database 2008 ·PLoS ONE ·Fabrice Lopez, Julien Textoris, Aurélie Bergon, Gilles Didier, Élisabeth Rémy, Samuel Granjeaud, Jean Imbert, Catherine Nguyen, Denis Puthier	19
11	Beyond the 3′ end: experimental validation of extended transcript isoforms 2007 ·Nucleic Acids Research ·Virginie Moucadel, Fabrice Lopez, Takeshi Ara, Philippe Benech, Daniel Gautheret	16
12	The disparate nature of “intergenic” polyadenylation sites 2006 ·RNA ·Fabrice Lopez, Samuel Granjeaud, Takeshi Ara, Badih Ghattas, Daniel Gautheret	24
13	Conservation of alternative polyadenylation patterns in mammalian genes 2006 ·BMC Genomics ·Takeshi Ara, Fabrice Lopez, William Ritchie, Philippe Benech, Daniel Gautheret	40
14	AGScan: a pluggable microarray image quantification software based on the ImageJ library 2006 ·Bioinformatics ·(unknown), Fabrice Lopez, (unknown)	14
15	AltTrans: Transcript pattern variants annotated for both alternative splicing and alternative polyadenylation 2006 ·BMC Bioinformatics ·Vincent Le Texier, Jean-Jack M. Riethoven, Vasudev Kumanduri, (unknown), Fabrice Lopez, Daniel Gautheret, Thangavel Alphonse Thanaraj	29
16	Characterization in maize of ZmTIP2-3, a root-specific tonoplast intrinsic protein exhibiting aquaporin activity 2003 ·Journal of Experimental Botany ·Fabrice Lopez, (unknown), Igor Sissoëff, J. Hoarau, Aline Mahé	31
17	Reverse Transcriptase-Polymerase Chain Reaction Validation of 25 “Orphan” Genes from Escherichia coli K-12 MG1655 2000 ·Genome Research ·(unknown), Olivier Poirot, Fabrice Lopez, Jean‐Michel Claverie	26
18	Large-Scale Statistical Analyses of Rice ESTs Reveal Correlated Patterns of Gene Expression 1999 ·Genome Research ·Rob M. Ewing, (unknown), Olivier Poirot, Fabrice Lopez, Stéphane Audic, Jean‐Michel Claverie	186
19	Alternate Polyadenylation in Human mRNAs: A Large-Scale Analysis by EST Clustering 1998 ·Genome Research ·Daniel Gautheret, Olivier Poirot, Fabrice Lopez, Stéphane Audic, Jean‐Michel Claverie	108
20	SAmBA: An interactive software for optimizing the design of biological macromolecules crystallization experiments 1997 ·Proteins Structure Function and Bioinformatics ·Stéphane Audic, Fabrice Lopez, Jean‐Michel Claverie, Olivier Poirot, Chantal Abergel	38

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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