Eric E. Allen

10.0k total citations · 2 hit papers
113 papers, 6.2k citations indexed

About

Eric E. Allen is a scholar working on Ecology, Molecular Biology and Artificial Intelligence. According to data from OpenAlex, Eric E. Allen has authored 113 papers receiving a total of 6.2k indexed citations (citations by other indexed papers that have themselves been cited), including 53 papers in Ecology, 51 papers in Molecular Biology and 15 papers in Artificial Intelligence. Recurrent topics in Eric E. Allen's work include Microbial Community Ecology and Physiology (41 papers), Genomics and Phylogenetic Studies (29 papers) and Microbial Natural Products and Biosynthesis (14 papers). Eric E. Allen is often cited by papers focused on Microbial Community Ecology and Physiology (41 papers), Genomics and Phylogenetic Studies (29 papers) and Microbial Natural Products and Biosynthesis (14 papers). Eric E. Allen collaborates with scholars based in United States, Australia and Guam. Eric E. Allen's co-authors include Sheila Podell, Douglas H. Bartlett, Alexander T. Neu, Jillian F. Banfield, Kaustuv Roy, Robert Cartwright, Paul R. Jensen, Christine N. Shulse, Bradley S. Moore and Juan A. Ugalde and has published in prestigious journals such as Nature, Science and Proceedings of the National Academy of Sciences.

In The Last Decade

Eric E. Allen

108 papers receiving 6.0k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

The genome of a motile marine Synechococcus

2003 518 citations Brian Palenik, Bianca Brahamsha et al. Nature profile →
Defining and quantifying the core microbiome: Challenges and prospects

2021 327 citations Eric E. Allen et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Eric E. Allen United States	42	3.2k	2.7k	785	763	630	113	6.2k
Asaf Salamov United States	33	5.3k 1.7×	1.9k 0.7×	665 0.8×	238 0.3×	224 0.4×	66	8.8k
Julia Kubanek United States	41	1.1k 0.3×	1.2k 0.4×	487 0.6×	1.4k 1.9×	1.1k 1.8×	126	4.6k
Victor Markowitz United States	31	4.9k 1.5×	2.9k 1.1×	325 0.4×	125 0.2×	474 0.8×	127	7.3k
Salvador Capella-Gutiérrez Spain	19	5.1k 1.6×	2.4k 0.9×	330 0.4×	419 0.5×	358 0.6×	38	9.6k
Mark A. Ragan Australia	55	5.2k 1.6×	2.6k 0.9×	164 0.2×	1.6k 2.1×	475 0.8×	222	11.0k
Eric J. Mathur United States	20	3.1k 1.0×	2.1k 0.8×	190 0.2×	310 0.4×	286 0.5×	31	4.5k
Vladimir B. Bajić Saudi Arabia	57	7.1k 2.2×	1.2k 0.4×	378 0.5×	266 0.3×	295 0.5×	278	11.7k
Jonathan H. Badger United States	28	3.1k 1.0×	1.1k 0.4×	310 0.4×	250 0.3×	151 0.2×	50	4.5k
Ulrich Stingl Saudi Arabia	35	1.9k 0.6×	2.3k 0.8×	99 0.1×	700 0.9×	496 0.8×	90	4.0k
Sitao Wu United States	23	6.7k 2.1×	2.1k 0.8×	231 0.3×	219 0.3×	254 0.4×	47	10.4k

Countries citing papers authored by Eric E. Allen

Since Specialization

Citations

This map shows the geographic impact of Eric E. Allen's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Eric E. Allen with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Eric E. Allen more than expected).

Fields of papers citing papers by Eric E. Allen

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Eric E. Allen. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Eric E. Allen. The network helps show where Eric E. Allen may publish in the future.

Co-authorship network of co-authors of Eric E. Allen

This figure shows the co-authorship network connecting the top 25 collaborators of Eric E. Allen. A scholar is included among the top collaborators of Eric E. Allen based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Eric E. Allen. Eric E. Allen is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Murray, Emily R., et al.. (2025). Soil depth determines the microbial communities in Sorghum bicolor fields within a uniform regional environment. Microbiology Spectrum. 13(6). e0292824–e0292824.

Sachdeva, Rohan, Hong Zheng, Zoltán Füssy, et al.. (2025). Overturning circulation structures the microbial functional seascape of the South Pacific. Science. 389(6756). 176–182.

Abelson, Jamie M., et al.. (2024). State Department of Health’s Equitable Funding Allocation Methodology to Address COVID-19 Health Disparities Among High-Risk and Underserved Populations. American Journal of Public Health. 114(S7). S575–S579.

Podell, Sheila, Linda Wegley Kelly, Álvaro M. Plominsky, et al.. (2023). Herbivorous Fish Microbiome Adaptations to Sulfated Dietary Polysaccharides. Applied and Environmental Microbiology. 89(5). e0215422–e0215422. 9 indexed citations

Minich, Jeremiah J., et al.. (2022). Variation in Survival and Gut Microbiome Composition of Hatchery-Grown Native Oysters at Various Locations within the Puget Sound. Microbiology Spectrum. 10(3). e0198221–e0198221. 9 indexed citations

Minich, Jeremiah J., Andreas Härer, Benjamin W. Frable, et al.. (2022). Host biology, ecology and the environment influence microbial biomass and diversity in 101 marine fish species. Nature Communications. 13(1). 6978–6978. 47 indexed citations

Gentry, Emily C., Jeremiah J. Minich, Lieve M. L. Laurens, et al.. (2022). Fine scale transitions of the microbiota and metabolome along the gastrointestinal tract of herbivorous fishes. SHILAP Revista de lepidopterología. 4(1). 33–33. 19 indexed citations

Allen, Eric E., et al.. (2020). Genetic Regulation of the Bacterial Omega-3 Polyunsaturated Fatty Acid Biosynthesis Pathway. Journal of Bacteriology. 202(16). 6 indexed citations

Fedarko, Marcus W., Cameron Martino, James T. Morton, et al.. (2020). Visualizing ’omic feature rankings and log-ratios using Qurro. NAR Genomics and Bioinformatics. 2(2). lqaa023–lqaa023. 104 indexed citations

10.

Mohanty, Ipsita, Sheila Podell, Jason S. Biggs, et al.. (2020). Multi-Omic Profiling of Melophlus Sponges Reveals Diverse Metabolomic and Microbiome Architectures that Are Non-overlapping with Ecological Neighbors. Marine Drugs. 18(2). 124–124. 24 indexed citations

11.

Minich, Jeremiah J., Colin Johnston, John P. Bowman, et al.. (2020). Microbial Ecology of Atlantic Salmon (Salmo salar) Hatcheries: Impacts of the Built Environment on Fish Mucosal Microbiota. Applied and Environmental Microbiology. 86(12). 87 indexed citations

12.

Minich, Jeremiah J., et al.. (2020). Temporal, Environmental, and Biological Drivers of the Mucosal Microbiome in a Wild Marine Fish, Scomber japonicus. mSphere. 5(3). 62 indexed citations

13.

Peoples, Logan M., Jessica M. Blanton, Eric E. Allen, et al.. (2019). Microbial Community Diversity Within Sediments from Two Geographically Separated Hadal Trenches. Frontiers in Microbiology. 10. 347–347. 63 indexed citations

14.

Schorn, Michelle, Peter A. Jordan, Sheila Podell, et al.. (2019). Comparative Genomics of Cyanobacterial Symbionts Reveals Distinct, Specialized Metabolism in TropicalDysideidaeSponges. mBio. 10(3). 32 indexed citations

15.

Shulse, Christine N., et al.. (2019). Linkage of Marine Bacterial Polyunsaturated Fatty Acid and Long-Chain Hydrocarbon Biosynthesis. Frontiers in Microbiology. 10. 702–702. 13 indexed citations

16.

Minich, Jeremiah J., Qiyun Zhu, Zhenjiang Zech Xu, et al.. (2018). Microbial effects of livestock manure fertilization on freshwater aquaculture ponds rearing tilapia (Oreochromis shiranus) and North African catfish (Clarias gariepinus). MicrobiologyOpen. 7(6). e00716–e00716. 28 indexed citations

17.

Kaneko, Ryo, Jessica M. Blanton, Matthias Witt, et al.. (2018). Bacterioplankton drawdown of coral mass-spawned organic matter. The ISME Journal. 12(9). 2238–2251. 8 indexed citations

18.

Akberdin, Ilya R., et al.. (2017). Fatty Acid Biosynthesis Pathways in Methylomicrobium buryatense 5G(B1). Frontiers in Microbiology. 7. 2167–2167. 49 indexed citations

19.

Andrade, Karen, Karla B. Heidelberg, Joanne Emerson, et al.. (2015). Metagenomic and lipid analyses reveal a diel cycle in a hypersaline microbial ecosystem. The ISME Journal. 9(12). 2697–2711. 27 indexed citations

20.

Palenik, Brian, Bianca Brahamsha, Frank W. Larimer, et al.. (2003). The genome of a motile marine Synechococcus. Nature. 424(6952). 1037–1042. 518 indexed citations breakdown →

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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