Andrew E. Allen

19.2k total citations · 1 hit paper
145 papers, 8.4k citations indexed

About

Andrew E. Allen is a scholar working on Ecology, Molecular Biology and Oceanography. According to data from OpenAlex, Andrew E. Allen has authored 145 papers receiving a total of 8.4k indexed citations (citations by other indexed papers that have themselves been cited), including 94 papers in Ecology, 74 papers in Molecular Biology and 63 papers in Oceanography. Recurrent topics in Andrew E. Allen's work include Microbial Community Ecology and Physiology (90 papers), Marine and coastal ecosystems (61 papers) and Protist diversity and phylogeny (38 papers). Andrew E. Allen is often cited by papers focused on Microbial Community Ecology and Physiology (90 papers), Marine and coastal ecosystems (61 papers) and Protist diversity and phylogeny (38 papers). Andrew E. Allen collaborates with scholars based in United States, France and Germany. Andrew E. Allen's co-authors include Chris Bowler, Christopher L. Dupont, John P. McCrow, François M. M. Morel, Erin M. Bertrand, T Hai, Curt D. Wolfgang, Umasundari Sivaprasad, Assaf Vardi and Hong Zheng and has published in prestigious journals such as Nature, Science and Proceedings of the National Academy of Sciences.

In The Last Decade

Andrew E. Allen

135 papers receiving 8.3k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

ATF3 and stress responses.

1999 553 citations Andrew E. Allen et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Andrew E. Allen United States	51	4.1k	4.1k	3.3k	1.7k	1.4k	145	8.4k
Christopher L. Dupont United States	57	3.9k 0.9×	4.1k 1.0×	2.7k 0.8×	1.1k 0.6×	508 0.4×	150	9.3k
Senjie Lin United States	48	4.1k 1.0×	4.8k 1.2×	3.7k 1.1×	1.1k 0.7×	345 0.3×	252	9.0k
Brian Palenik United States	46	3.1k 0.8×	3.7k 0.9×	3.1k 0.9×	886 0.5×	283 0.2×	103	6.8k
Shady A. Amin United States	27	1.6k 0.4×	3.2k 0.8×	1.9k 0.6×	764 0.5×	315 0.2×	63	4.7k
Ulf Karsten Germany	60	1.4k 0.3×	3.7k 0.9×	5.7k 1.7×	3.8k 2.2×	699 0.5×	356	11.9k
Sonya T. Dyhrman United States	45	1.8k 0.4×	3.5k 0.8×	4.1k 1.2×	526 0.3×	324 0.2×	99	6.5k
Makoto M. Watanabe Japan	44	1.9k 0.5×	2.0k 0.5×	2.2k 0.7×	2.0k 1.2×	324 0.2×	270	6.8k
Ferrán García‐Pichel United States	65	2.1k 0.5×	4.7k 1.2×	1.9k 0.6×	3.1k 1.8×	413 0.3×	160	12.7k
Birgitta Bergman Sweden	47	2.9k 0.7×	4.5k 1.1×	3.9k 1.2×	1.6k 0.9×	219 0.2×	205	9.7k
Thomas Möck United Kingdom	38	1.7k 0.4×	1.8k 0.4×	1.7k 0.5×	1.1k 0.7×	758 0.6×	105	4.5k

Countries citing papers authored by Andrew E. Allen

Since Specialization

Citations

This map shows the geographic impact of Andrew E. Allen's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Andrew E. Allen with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Andrew E. Allen more than expected).

Fields of papers citing papers by Andrew E. Allen

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Andrew E. Allen. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Andrew E. Allen. The network helps show where Andrew E. Allen may publish in the future.

Co-authorship network of co-authors of Andrew E. Allen

This figure shows the co-authorship network connecting the top 25 collaborators of Andrew E. Allen. A scholar is included among the top collaborators of Andrew E. Allen based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Andrew E. Allen. Andrew E. Allen is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Mochizuki, M., M. Moore, Zoltán Füssy, et al.. (2025). Domoic acid biosynthesis and genome expansion in Nitzschia navis-varingica. mBio. 16(12). e0207925–e0207925.

Ben‐Dor, Shifra, Orly Dym, Chuan Ku, et al.. (2025). Cathepsin X is a conserved cell death protein involved in algal response to environmental stress. Current Biology. 35(10). 2240–2255.e6.

Allen, Andrew E., et al.. (2024). Endemic, cosmopolitan, and generalist taxa and their habitat affinities within a coastal marine microbiome. Scientific Reports. 14(1). 22408–22408.

Jouhet, Juliette, Alberto Amato, Éric Maréchal, et al.. (2024). Delta-5 elongase knockout reduces docosahexaenoic acid and lipid synthesis and increases heat sensitivity in a diatom. PLANT PHYSIOLOGY. 196(2). 1356–1373. 5 indexed citations

Brunson, John K., John P. Ryan, Clarissa R. Anderson, et al.. (2024). Molecular forecasting of domoic acid during a pervasive toxic diatom bloom. Proceedings of the National Academy of Sciences. 121(40). e2319177121–e2319177121. 11 indexed citations

Kleindienst, Sara, Andrew E. Allen, A. Murat Eren, et al.. (2023). Species-specific responses of marine bacteria to environmental perturbation. ISME Communications. 3(1). 99–99. 6 indexed citations

Jasieniecka‐Gazarkiewicz, Katarzyna, Fabien Richard, Juliette Jouhet, et al.. (2023). Two plastidial lysophosphatidic acid acyltransferases differentially mediate the biosynthesis of membrane lipids and triacylglycerols in Phaeodactylum tricornutum. New Phytologist. 241(4). 1543–1558. 7 indexed citations

Allen, Andrew E., et al.. (2021). Proteomic traits vary across taxa in a coastal Antarctic phytoplankton bloom. The ISME Journal. 16(2). 569–579. 8 indexed citations

Allen, Andrew E., John P. McCrow, Rachel E. Sipler, et al.. (2021). Molecular underpinnings and biogeochemical consequences of enhanced diatom growth in a warming Southern Ocean. Proceedings of the National Academy of Sciences. 118(30). 28 indexed citations

10.

Krause, Jeffrey W., Mark A. Brzezinski, John L. Largier, et al.. (2020). The interaction of physical and biological factors drives phytoplankton spatial distribution in the northern California Current. Limnology and Oceanography. 65(9). 1974–1989. 8 indexed citations

11.

Crone, M., Victoria Newton, Andrew E. Allen, et al.. (2020). A validated photonumeric scale for infraorbital dark circles and its application in evaluating the efficacy of a cosmetic treatment product in a split‐face randomized clinical trial. International Journal of Cosmetic Science. 43(1). 48–56. 11 indexed citations

12.

Coale, Tyler H., Mark Moosburner, Aleš Horák, et al.. (2019). Reduction-dependent siderophore assimilation in a model pennate diatom. Proceedings of the National Academy of Sciences. 116(47). 23609–23617. 45 indexed citations

13.

Wu, Miao, Elden Rowland, Rob Middag, et al.. (2019). Manganese and iron deficiency in Southern Ocean Phaeocystis antarctica populations revealed through taxon-specific protein indicators. Nature Communications. 10(1). 3582–3582. 60 indexed citations

14.

Bronk, Deborah A., et al.. (2018). Stoichiometric N:P Ratios, Temperature, and Iron Impact Carbon and Nitrogen Uptake by Ross Sea Microbial Communities. Journal of Geophysical Research Biogeosciences. 123(9). 2955–2975. 6 indexed citations

15.

Brunson, John K., Shaun M. K. McKinnie, Jonathan R. Chekan, et al.. (2018). Biosynthesis of the neurotoxin domoic acid in a bloom-forming diatom. Science. 361(6409). 1356–1358. 135 indexed citations

16.

Diner, Rachel E., Chari M. Noddings, Jeffrey B. McQuaid, et al.. (2017). Diatom centromeres suggest a mechanism for nuclear DNA acquisition. Proceedings of the National Academy of Sciences. 114(29). E6015–E6024. 43 indexed citations

17.

McCarthy, James K., Sarah R. Smith, John P. McCrow, et al.. (2017). Nitrate Reductase Knockout Uncouples Nitrate Transport from Nitrate Assimilation and Drives Repartitioning of Carbon Flux in a Model Pennate Diatom. The Plant Cell. 29(8). 2047–2070. 73 indexed citations

18.

Dupont, Christopher L., John P. McCrow, Ruben Valas, et al.. (2014). Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities. The ISME Journal. 9(5). 1076–1092. 80 indexed citations

19.

Bertrand, Erin M., Andrew E. Allen, Christopher L. Dupont, et al.. (2012). Influence of cobalamin scarcity on diatom molecular physiology and identification of a cobalamin acquisition protein. Proceedings of the National Academy of Sciences. 109(26). E1762–71. 99 indexed citations

20.

Marchetti, Adrian, David M. Schruth, Colleen A. Durkin, et al.. (2012). Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability. Proceedings of the National Academy of Sciences. 109(6). E317–25. 224 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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