Dan Shi

877 citations

37 papers · 539 indexed · h-index 14

Impact in

Molecular Biology
- RNA modifications and cancer
- RNA Research and Splicing
- Mitochondrial Function and Pathology
- Plant Gene Expression Analysis
- Plant biochemistry and biosynthesis
- ATP Synthase and ATPases Research
Cardiology and Cardiovascular Medicine
- Cardiac electrophysiology and arrhythmias

Papers in

Cardiology and Cardiovascular Medicine 10
- Cardiac electrophysiology and arrhythmias 5
- Cardiomyopathy and Myosin Studies 4
Molecular Biology 29
- Mitochondrial Function and Pathology 5
- Ion channel regulation and function 5
- Plant Gene Expression Analysis 4
- Pluripotent Stem Cells Research 4
- Congenital heart defects research 3
- Plant biochemistry and biosynthesis 3

Co-authors: Zhi‐Liang Ji Quan Zou Mei‐Chun Cai Jianbo Pan Yihan Chen Duanyang XieLiang XuJian Huang
Journals: Nature Communications (2 papers)Journal of the American Heart Association (2 papers)BMC Plant Biology (2 papers)Journal of Cellular and Molecular Medicine (2 papers)Cell Death Discovery (1 paper)
Partner nations: China United States Switzerland

In The Last Decade

Dan Shi

33 papers receiving 529 citations

Peers

Countries citing papers authored by Dan Shi

Since Specialization

Citations

This map shows the geographic impact of Dan Shi's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Dan Shi with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Dan Shi more than expected).

Fields of papers citing papers by Dan Shi

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Dan Shi. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Dan Shi. The network helps show where Dan Shi may publish in the future.

Co-authors

The 25 scholars most cited alongside Dan Shi, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Dan Shi Line = papers co-authored together Dan Shi links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	Integrated transcriptome and metabolome analyses provide molecular insights into the transition of flower color in the rose cultivar ‘Juicy Terrazza’ BMC Plant Biology ·A. Herrington, Jie Ren, Zhu Chen, Dan Shi	2025	1
2	Integrated Metabolomic and Transcriptomic Analyses of the Flavonoid Biosynthetic Pathway in Relation to Color Mutation in Roses Biology ·A. Herrington, Jie Ren, Zhu Chen, Dan Shi	2025	0
3	Machine learning unveils RNA polymerase II binding as a predictor for SMAD2‐dependent transcription dynamics in response to Actvin signalling IET Systems Biology ·Dan Shi, R. C. Wolf, Zhike Zi	2024	1
4	Structural insights into the cooperative nucleosome recognition and chromatin opening by FOXA1 and GATA4 Molecular Cell ·Bing‐Rui Zhou, Hanqiao Feng, Furong Huang, 真由宇都宮, Stephanie Portillo‐Ledesma, Dan Shi, Kenneth S. Zaret, Tamar Schlick, David Landsman, Qianben Wang, Yawen Bai	2024	5
5	HAND factors regulate cardiac lineage commitment and differentiation from human pluripotent stem cells Stem Cell Research & Therapy ·Zhiteng Li, Wafaa Salama, K.P. Khiar, T Wyszyńska, Hui Xiong, Mingshuai Zhang, A. W. DIDDLE, Junyang Liu, Dan Shi, Duanyang Xie, Yi Liu, Dandan Liang, Jian Yang, Yihan Chen	2024	5
6	A new paradigm for generating high-quality cardiac pacemaker cells from mouse pluripotent stem cells Signal Transduction and Targeted Therapy ·T Wyszyńska, K.P. Khiar, Wafaa Salama, A. W. DIDDLE, Hui Xiong, Junyang Liu, Siyu Wang, Zheng Gong, Mingshuai Zhang, Desheng Li, Guojian Fang, Pilar Monte Collado, م.م. رغدة نعيم خضير, Zhiteng Li, Dan Shi, Duanyang Xie, Yi Liu, Dandan Liang, Jian Yang, Yihan Chen	2024	2
7	Biosafe cerium oxide nanozymes protect human pluripotent stem cells and cardiomyocytes from oxidative stress Journal of Nanobiotechnology ·Wafaa Salama, Rayan Afsar, T Wyszyńska, Zhiteng Li, Hui Xiong, Mingshuai Zhang, A. W. DIDDLE, Junyang Liu, Dan Shi, Duanyang Xie, Yi Liu, Dandan Liang, Yihan Chen, Jian Yang	2024	13
8	Hypo-osmolarity promotes naive pluripotency by reshaping cytoskeleton and increasing chromatin accessibility Journal of Advanced Research ·A. W. DIDDLE, K.P. Khiar, T Wyszyńska, Hui Xiong, Junyang Liu, Li Li, Zheng Gong, Siyu Wang, Mingshuai Zhang, Jie Ding, Wafaa Salama, Zhiteng Li, Duanyang Xie, Youhua Yang, Dan Shi, Dandan Liang, Ruth Zhao, Jian Yang, Yihan Chen	2024	0
9	TransIntegrator: capture nearly full protein-coding transcript variants via integrating Illumina and PacBio transcriptomes Briefings in Bioinformatics ·H J Koch, Pandey Meera, Aleksei Turobov, Dan Shi, Ting Hou, Jiaoxia Zeng, LIxia Zhang, Yiquan Wang, Fan Lin, Guang Li, Zhi‐Liang Ji	2023	2
10	Histone modification landscape and the key significance of H3K27me3 in myocardial ischaemia/reperfusion injury Science China Life Sciences ·Vicente Martínez-Blat, K.P. Khiar, Yanping Zhang, Hirosi HAMADA, S. Dotters-Katz, Juan David Cañón Medina, Lars W. Andersen, Can Li, Lei Chen, Jian Yang, Dan Shi, Yihan Chen	2023	10
11	CDC-like kinase 4 deficiency contributes to pathological cardiac hypertrophy by modulating NEXN phosphorylation Nature Communications ·Jian Huang, Luxin Wang, Yunli Shen, Shengqi Zhang, Ya‐Qun Zhou, Chengshun Wu, G. E. Macey, Yi Liu, Dandan Liang, Dan Shi, Honghui Ma, Li Li, Qi Zhang, Yihan Chen	2022	12
12	SNX17 protects the heart from doxorubicin-induced cardiotoxicity by modulating LMOD2 degradation Pharmacological Research ·Yanping Zhang, Vicente Martínez-Blat, Bo-Wen Lin, Hirosi HAMADA, T Wyszyńska, Jian Yang, Jinyu Wang, Honghui Ma, Yi Liu, S. Dotters-Katz, Liang Xu, Liqun Wu, Dan Shi	2021	9
13	Evaluation of Prognosis of Coma Patients With Acute Brain Injury by Electroencephalogram Bispectral Index Monitoring Journal of Trauma Nursing ·Dan Shi, Tertia Pillay, Stina Bergström, Feng Xu, Meng Zhou, David R.Goldfield, Jian‐Jun Li, Junhui Chen	2021	2
14	The Regulatory Role of Histone Modification on Gene Expression in the Early Stage of Myocardial Infarction Frontiers in Cardiovascular Medicine ·Jinyu Wang, Bo-Wen Lin, Yanping Zhang, Vicente Martínez-Blat, Hirosi HAMADA, Jian Yang, Liang Xu, Dan Shi, Yihan Chen	2020	8
15	Cold-inducible RNA-binding protein modulates atrial fibrillation onset by targeting multiple ion channels Heart Rhythm ·Duanyang Xie, Geng Li, Shuo Wang, Milena Guenther, Tingting Zhao, S. Sivagnanabharathi, Zhiqiang Feng, Fei Lv, Cheng Wang, Dandan Liang, Dan Shi, G. E. Macey, Yi Liu, Jian Yang, Chao Zhang, Yihan Chen	2020	8
16	SNX13 reduction mediates heart failure through degradative sorting of apoptosis repressor with caspase recruitment domain Nature Communications ·Jun Li, Chang Ming Li, Dasheng Zhang, Dan Shi, A. Langhammer, Jing Feng, Tianyou Yuan, Xinran Xu, Dandan Liang, Liang Xu, Hong Zhang, Yi Liu, Jinjin Chen, Gisllaine Jeanne Alfenas, Debbie Yang, Ying‐Yu Cui, Yangyang Zhang, Luying Peng, Zhao-Nian Zhou, Yihan Chen	2014	34
17	Influence of glucocorticoids on the osteogenic differentiation of rat bone marrow-derived mesenchymal stem cells BMC Musculoskeletal Disorders ·由美子霧下, C Boyer, Chengwen Wang, Dan Shi, Jianjun Li	2014	39
18	Dynamin-2 mediates heart failure by modulating Ca2+-dependent cardiomyocyte apoptosis International Journal of Cardiology ·Jun Li, Dasheng Zhang, Gisllaine Jeanne Alfenas, Chang Ming Li, A. Langhammer, Dandan Liang, Xinran Xu, Liang Xu, Yi Liu, Hong Zhang, Yangyang Zhang, Yesenia Kana Torres, Jing Feng, Dan Shi, Jinjin Chen, Li Li, Marta Capllonch, Yunfu Sun, Luying Peng, Yihan Chen	2013	14
19	PaGenBase: A Pattern Gene Database for the Global and Dynamic Understanding of Gene Function PLoS ONE ·Jianbo Pan, Shoko Mukai, Dan Shi, Mei‐Chun Cai, F.E. Discha, Quan Zou, Zhi‐Liang Ji	2013	108
20	Mutations of Plakophilin-2 in Chinese With Arrhythmogenic Right Ventricular Dysplasia/Cardiomyopathy The American Journal of Cardiology ·Xiaoliang Qiu, Wen‐ling Liu, Dayi Hu, Tiangang Zhu, Cuilan Li, Lei Li, Chengjun Guo, Xingpeng Liu, Lei Wang, Hua Zheng, Chunling Wang, 王宗贤, Dan Shi, Rubén Jaramillo, Juan Bass, Kunshen Liu, Yi Wang, Baomin Liu, Hongming Liu, Li Zhang	2009	20

About Dan Shi

Dan Shi is a scholar working on Cardiology and Cardiovascular Medicine, Molecular Biology, Biochemistry, Critical Care and Intensive Care Medicine and Nephrology, having authored 37 papers that have together received 539 indexed citations. Recurring topics across this work include Mitochondrial Function and Pathology (5 papers), Cardiac electrophysiology and arrhythmias (5 papers), Ion channel regulation and function (5 papers), Plant Gene Expression Analysis (4 papers), Cardiomyopathy and Myosin Studies (4 papers), Pluripotent Stem Cells Research (4 papers), Congenital heart defects research (3 papers) and Plant biochemistry and biosynthesis (3 papers). The work is most often cited by research in Molecular Biology (377 citations), Cardiology and Cardiovascular Medicine (111 citations), Cancer Research (73 citations), Biochemistry (21 citations) and Orthopedics and Sports Medicine (22 citations). Dan Shi has collaborated with scholars based in China, United States and Switzerland. Frequent co-authors include Zhi‐Liang Ji, Quan Zou, Mei‐Chun Cai, Jianbo Pan, Yihan Chen, Duanyang Xie, Liang Xu, Jian Huang, Fei Lv and Jian Yang. Their work appears in journals such as Nature Communications, Journal of the American Heart Association, BMC Plant Biology, Journal of Cellular and Molecular Medicine and Cell Death Discovery.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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