Bryan S. Der

2.7k citations

22 papers · 1.9k indexed · 1 hit paper · h-index 18

Impact in

Molecular Biology top 5%
- Gene Regulatory Network Analysis
- RNA and protein synthesis mechanisms
- CRISPR and Genetic Engineering
- Protein Structure and Dynamics
- Microbial Metabolic Engineering and Bioproduction
Biophysics top 5%

Papers in ⓘ

Biophysics 2
Molecular Biology 19
- Protein Structure and Dynamics 7
- CRISPR and Genetic Engineering 4
- RNA and protein synthesis mechanisms 4
- Gene Regulatory Network Analysis 4
- Glycosylation and Glycoproteins Research 3
- Protein purification and stability 3

Co-authors: Brian Kuhlman (11 shared papers)Christopher A. Voigt (5 shared papers)Jonghyeon Shin (2 shared papers)Prashant Vaidyanathan (2 shared papers)Douglas Densmore (2 shared papers)David Ross (1 shared paper)Elizabeth A. Strychalski (1 shared paper)Alec A. K. Nielsen (1 shared paper)
Journals: Protein Science (2 papers)Molecular Systems Biology (2 papers)Science (2 papers)Molecular BioSystems (2 papers)PLoS ONE (2 papers)
Partner nations: United States Italy Switzerland

In The Last Decade

Bryan S. Der

22 papers receiving 1.9k citations

Hit Papers

align trajectories log scale

Genetic circuit design automation 2016 · 701 citations

Peers

Countries citing papers authored by Bryan S. Der

Since Specialization

Citations

This map shows the geographic impact of Bryan S. Der's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Bryan S. Der with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Bryan S. Der more than expected).

Fields of papers citing papers by Bryan S. Der

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Bryan S. Der. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Bryan S. Der. The network helps show where Bryan S. Der may publish in the future.

Co-authors

The 25 scholars most cited alongside Bryan S. Der, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Bryan S. Der Line = papers co-authored together Bryan S. Der links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

Showing the 20 most-cited of 22 papers — load more, or switch the sort, to bring in the rest.

#	Work
1	Genetic circuit design automation Science ·Alec A. K. Nielsen, Bryan S. Der, Jonghyeon Shin, Prashant Vaidyanathan, Vanya Paralanov, Elizabeth A. Strychalski, David Ross, Douglas Densmore, Christopher A. Voigt Hit paper breakdown →	2016	701
2	Serverification of Molecular Modeling Applications: The Rosetta Online Server That Includes Everyone (ROSIE) PLoS ONE ·Sergey Lyskov, Fang-Chieh Chou, Shane Ó Conchúir, Bryan S. Der, Kevin Drew, Daisuke Kuroda, Jianqing Xu, Brian D. Weitzner, P. Douglas Renfrew, Parin Sripakdeevong, Benjamin Borgo, James J. Havranek, Brian Kuhlman, Tanja Kortemme, Richard Bonneau, Jeffrey J. Gray, Rhiju Das	2013	308
3	Evolution of a highly active and enantiospecific metalloenzyme from short peptides Science ·Sabine Studer, Douglas A. Hansen, Zbigniew Pianowski, Peer R. E. Mittl, Aaron Debon, Sharon L. Guffy, Bryan S. Der, Brian Kuhlman, Donald Hilvert	2018	130
4	Structure-Based Design of Supercharged, Highly Thermoresistant Antibodies Chemistry & Biology ·Aleksandr E. Miklos, Christien Kluwe, Bryan S. Der, Supriya Pai, Aroop Sircar, Randall A. Hughes, Monica Berrondo, Jianqing Xu, Vlad Codrea, Patricia E. Buckley, Alena M Calm, Heather Welsh, Candice R. Warner, Melody Zacharko, James P. Carney, Jeffrey J. Gray, George Georgiou, Brian Kuhlman, Andrew D. Ellington	2012	120
5	Catalysis by a De Novo Zinc-Mediated Protein Interface: Implications for Natural Enzyme Evolution and Rational Enzyme Engineering Biochemistry ·Bryan S. Der, David Edwards, Brian Kuhlman	2012	114
6	Metal-Mediated Affinity and Orientation Specificity in a Computationally Designed Protein Homodimer Journal of the American Chemical Society ·Bryan S. Der, Mischa Machius, Michael J. Miley, Jeffrey Mills, Thomas Szyperski, Brian Kuhlman	2011	92
7	Alternative Computational Protocols for Supercharging Protein Surfaces for Reversible Unfolding and Retention of Stability PLoS ONE ·Bryan S. Der, Christien Kluwe, Aleksandr E. Miklos, Ron Jacak, Sergey Lyskov, Jeffrey J. Gray, George Georgiou, Andrew D. Ellington, Brian Kuhlman	2013	77
8	Genetic circuit characterization and debugging using RNA ‐seq Molecular Systems Biology ·Thomas E. Gorochowski, Amin Espah Borujeni, Yongjin Park, Alec AK Nielsen, Jing Zhang, Bryan S. Der, D. Benjamin Gordon, Christopher A. Voigt	2017	61
9	Programming Escherichia coli to function as a digital display Molecular Systems Biology ·Jonghyeon Shin, Shuyi Zhang, Bryan S. Der, Alec AK Nielsen, Christopher A. Voigt	2020	52
10	DNAplotlib: Programmable Visualization of Genetic Designs and Associated Data ACS Synthetic Biology ·Bryan S. Der, Emerson Glassey, Bryan Bartley, Casper Enghuus, Daniel B. Goodman, D. Benjamin Gordon, Christopher A. Voigt, Thomas E. Gorochowski	2016	38
11	Analysis of ligand binding to a ribose biosensor using site‐directed mutagenesis and fluorescence spectroscopy Protein Science ·Natalie C. Vercillo, Kaitlin J. Herald, John M. Fox, Bryan S. Der, Jonathan D. Dattelbaum	2007	30
12	Construction of a reagentless glucose biosensor using molecular exciton luminescence Analytical Biochemistry ·Bryan S. Der, Jonathan D. Dattelbaum	2007	29
13	Amino acid transport in thermophiles: characterization of an arginine-binding protein in Thermotoga maritima Molecular BioSystems ·Matthew S. Luchansky, Bryan S. Der, Sabato D’Auria, Gabriella Pòcsfalvi, Luisa Iozzino, Daniela Marasco, Jonathan D. Dattelbaum	2009	26
14	Computational de novo design of a four‐helix bundle protein—DND_4HB Protein Science ·Grant S. Murphy, Bharathwaj Sathyamoorthy, Bryan S. Der, Mischa Machius, S. Pulavarti, Thomas Szyperski, Brian Kuhlman	2014	22
15	A Framework for Genetic Logic Synthesis Proceedings of the IEEE ·Prashant Vaidyanathan, Bryan S. Der, Swapnil Bhatia, Nicholas Roehner, Ryan Silva, Christopher A. Voigt, Douglas Densmore	2015	21
16	Amino acid transport in thermophiles: characterization of an arginine-binding protein in Thermotoga maritima . 2. Molecular organization and structural stability Molecular BioSystems ·Andrea Scirè, Anna Marabotti, Maria Staiano, Luisa Iozzino, Matthew S. Luchansky, Bryan S. Der, Jonathan D. Dattelbaum, Fabio Tanfani, Sabato D’Auria	2010	18
17	Design of Active Transport Must Be Highly Intricate: A Possible Role of Myosin and Ena/VASP for G-Actin Transport in Filopodia Biophysical Journal ·Pavel I. Zhuravlev, Bryan S. Der, Garegin A. Papoian	2010	18
18	Strategies to control the binding mode of de novo designed protein interactions Current Opinion in Structural Biology ·Bryan S. Der, Brian Kuhlman	2013	18
19	Probing the minimal determinants of zinc binding with computational protein design Protein Engineering Design and Selection ·Sharon L. Guffy, Bryan S. Der, Brian Kuhlman	2016	17
20	Crystallization and preliminary X-ray crystallographic analysis of ligand-free and arginine-bound forms ofThermotoga maritimaarginine-binding protein Acta Crystallographica Section F Structural Biology and Crystallization Communications ·Alessia Ruggiero, Jonathan D. Dattelbaum, Anna Pennacchio, Luisa Iozzino, Maria Staiano, Matthew S. Luchansky, Bryan S. Der, Rita Berisio, Sabato D’Auria, Luigi Vitagliano	2011	13

About Bryan S. Der

Bryan S. Der is a scholar working on Biophysics, Molecular Biology, Materials Chemistry, Biochemistry and Radiology, Nuclear Medicine and Imaging, having authored 22 papers that have together received 1.9k indexed citations. Recurring topics across this work include Enzyme Structure and Function (9 papers), Protein Structure and Dynamics (7 papers), CRISPR and Genetic Engineering (4 papers), RNA and protein synthesis mechanisms (4 papers), Gene Regulatory Network Analysis (4 papers), Glycosylation and Glycoproteins Research (3 papers), Protein purification and stability (3 papers) and Monoclonal and Polyclonal Antibodies Research (3 papers). The work is most often cited by research in Molecular Biology (1.6k citations), Biophysics (69 citations), Biotechnology (97 citations), Genetics (233 citations) and Radiology, Nuclear Medicine and Imaging (170 citations). Bryan S. Der has collaborated with scholars based in United States, Italy and Switzerland. Frequent co-authors include Brian Kuhlman, Christopher A. Voigt, Jonghyeon Shin, Prashant Vaidyanathan, Douglas Densmore, David Ross, Elizabeth A. Strychalski, Alec A. K. Nielsen, Vanya Paralanov and David Edwards. Their work appears in journals such as Protein Science, Molecular Systems Biology, Science, Molecular BioSystems and PLoS ONE.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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