António J. M. Ribeiro

2.2k total citations
41 papers, 1.5k citations indexed

About

António J. M. Ribeiro is a scholar working on Molecular Biology, Materials Chemistry and Computational Theory and Mathematics. According to data from OpenAlex, António J. M. Ribeiro has authored 41 papers receiving a total of 1.5k indexed citations (citations by other indexed papers that have themselves been cited), including 31 papers in Molecular Biology, 13 papers in Materials Chemistry and 7 papers in Computational Theory and Mathematics. Recurrent topics in António J. M. Ribeiro's work include Protein Structure and Dynamics (15 papers), Enzyme Catalysis and Immobilization (13 papers) and Enzyme Structure and Function (11 papers). António J. M. Ribeiro is often cited by papers focused on Protein Structure and Dynamics (15 papers), Enzyme Catalysis and Immobilization (13 papers) and Enzyme Structure and Function (11 papers). António J. M. Ribeiro collaborates with scholars based in Portugal, United Kingdom and Italy. António J. M. Ribeiro's co-authors include Pedro Alexandrino Fernandes, Maria J. Ramos, Janet M. Thornton, Jonathan D. Tyzack, Sérgio F. Sousa, Neera Borkakoti, Rui P. P. Neves, Gemma L. Holliday, João T. S. Coimbra and Nino Russo and has published in prestigious journals such as Journal of the American Chemical Society, Nucleic Acids Research and Journal of Biological Chemistry.

In The Last Decade

António J. M. Ribeiro

41 papers receiving 1.4k citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
António J. M. Ribeiro Portugal 20 933 273 237 202 139 41 1.5k
Johannes C. Hermann United States 21 984 1.1× 294 1.1× 227 1.0× 210 1.0× 147 1.1× 36 1.7k
S. Gerhardt Germany 26 1.3k 1.4× 295 1.1× 234 1.0× 103 0.5× 235 1.7× 59 2.1k
Shijun Zhong China 19 715 0.8× 135 0.5× 150 0.6× 149 0.7× 192 1.4× 36 1.2k
Wolfgang Haap Switzerland 22 623 0.7× 186 0.7× 477 2.0× 250 1.2× 147 1.1× 36 1.6k
Qing‐Chuan Zheng China 21 946 1.0× 324 1.2× 195 0.8× 228 1.1× 229 1.6× 160 1.9k
Bernard Gsell Switzerland 17 907 1.0× 244 0.9× 302 1.3× 133 0.7× 200 1.4× 19 1.7k
David J. Hosfield United States 28 2.2k 2.4× 235 0.9× 173 0.7× 94 0.5× 359 2.6× 37 3.0k
Cédric Grauffel Taiwan 19 897 1.0× 95 0.3× 182 0.8× 174 0.9× 198 1.4× 45 1.5k
Jianxin Duan United States 24 1.2k 1.3× 228 0.8× 662 2.8× 328 1.6× 289 2.1× 54 2.3k
Julian E. Fuchs Austria 32 1.4k 1.5× 256 0.9× 687 2.9× 299 1.5× 274 2.0× 92 2.5k

Countries citing papers authored by António J. M. Ribeiro

Since Specialization
Citations

This map shows the geographic impact of António J. M. Ribeiro's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by António J. M. Ribeiro with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites António J. M. Ribeiro more than expected).

Fields of papers citing papers by António J. M. Ribeiro

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by António J. M. Ribeiro. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by António J. M. Ribeiro. The network helps show where António J. M. Ribeiro may publish in the future.

Co-authorship network of co-authors of António J. M. Ribeiro

This figure shows the co-authorship network connecting the top 25 collaborators of António J. M. Ribeiro. A scholar is included among the top collaborators of António J. M. Ribeiro based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with António J. M. Ribeiro. António J. M. Ribeiro is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Borkakoti, Neera, et al.. (2025). A structural perspective on enzymes and their catalytic mechanisms. Current Opinion in Structural Biology. 92. 103040–103040. 5 indexed citations
2.
Ribeiro, António J. M., et al.. (2023). The 3D Modules of Enzyme Catalysis: Deconstructing Active Sites into Distinct Functional Entities. Journal of Molecular Biology. 435(20). 168254–168254. 7 indexed citations
3.
Ribeiro, António J. M., et al.. (2023). Enzyme function and evolution through the lens of bioinformatics. Biochemical Journal. 480(22). 1845–1863. 17 indexed citations
4.
Ribeiro, António J. M., et al.. (2022). Conformational Variation in Enzyme Catalysis: A Structural Study on Catalytic Residues. Journal of Molecular Biology. 434(7). 167517–167517. 31 indexed citations
5.
Ribeiro, António J. M., et al.. (2022). Using mechanism similarity to understand enzyme evolution. Biophysical Reviews. 14(6). 1273–1280. 4 indexed citations
6.
Tyzack, Jonathan D., António J. M. Ribeiro, Neera Borkakoti, & Janet M. Thornton. (2019). Exploring Chemical Biosynthetic Design Space with Transform-MinER. ACS Synthetic Biology. 8(11). 2494–2506. 11 indexed citations
7.
Ribeiro, António J. M., Jonathan D. Tyzack, Neera Borkakoti, Gemma L. Holliday, & Janet M. Thornton. (2019). A global analysis of function and conservation of catalytic residues in enzymes. Journal of Biological Chemistry. 295(2). 314–324. 88 indexed citations
8.
Ribeiro, António J. M., Jonathan D. Tyzack, Neera Borkakoti, & Janet M. Thornton. (2019). Identifying pseudoenzymes using functional annotation: pitfalls of common practice. FEBS Journal. 287(19). 4128–4140. 16 indexed citations
9.
Tyzack, Jonathan D., et al.. (2018). Ranking Enzyme Structures in the PDB by Bound Ligand Similarity to Biological Substrates. Structure. 26(4). 565–571.e3. 16 indexed citations
10.
Brück, Oscar, Sami Blom, Olli Dufva, et al.. (2018). Immune cell contexture in the bone marrow tumor microenvironment impacts therapy response in CML. Leukemia. 32(7). 1643–1656. 69 indexed citations
11.
Martin‐Herranz, Daniel E., António J. M. Ribeiro, Felix Krueger, et al.. (2017). cuRRBS: simple and robust evaluation of enzyme combinations for reduced representation approaches. Nucleic Acids Research. 45(20). 11559–11569. 10 indexed citations
12.
Zhang, Hu, Ying Sim, Oi Lian Kon, et al.. (2017). Unique Triphenylphosphonium Derivatives for Enhanced Mitochondrial Uptake and Photodynamic Therapy. Bioconjugate Chemistry. 28(2). 590–599. 52 indexed citations
13.
Pinto, Gaspar, António J. M. Ribeiro, Maria J. Ramos, et al.. (2015). New insights in the catalytic mechanism of tyrosine ammonia-lyase given by QM/MM and QM cluster models. Archives of Biochemistry and Biophysics. 582. 107–115. 21 indexed citations
14.
Ribeiro, António J. M., Diogo Santos‐Martins, Nino Russo, Maria J. Ramos, & Pedro Alexandrino Fernandes. (2015). Enzymatic Flexibility and Reaction Rate: A QM/MM Study of HIV-1 Protease. ACS Catalysis. 5(9). 5617–5626. 75 indexed citations
15.
Brás, Natércia F., et al.. (2014). Analyses of cobalt–ligand and potassium–ligand bond lengths in metalloproteins: trends and patterns. Journal of Molecular Modeling. 20(6). 2271–2271. 5 indexed citations
16.
Ribeiro, António J. M., Marta E. Alberto, Maria J. Ramos, Pedro Alexandrino Fernandes, & Nino Russo. (2013). The Catalytic Mechanism of Protein Phosphatase 5 Established by DFT Calculations. Chemistry - A European Journal. 19(42). 14081–14089. 42 indexed citations
17.
Sousa, Sérgio F., António J. M. Ribeiro, João T. S. Coimbra, et al.. (2013). Protein-Ligand Docking in the New Millennium – A Retrospective of 10 Years in the Field. Current Medicinal Chemistry. 20(18). 2296–2314. 166 indexed citations
18.
Sousa, Sérgio F., Gaspar Pinto, António J. M. Ribeiro, et al.. (2013). Comparative analysis of the performance of commonly available density functionals in the determination of geometrical parameters for copper complexes. Journal of Computational Chemistry. 34(24). 2079–2090. 50 indexed citations
19.
Ribeiro, António J. M., Maria J. Ramos, Pedro Alexandrino Fernandes, & Nino Russo. (2013). A DFT study of the applicability of the charge balance model in two-metal enzymes: The case of cAMP-dependent protein kinase. Chemical Physics Letters. 571. 66–70. 7 indexed citations
20.
Weigang, Li, et al.. (2002). An Algorithm for Determining the Controllers of Supervised Entities at the First Level: Brazilian Central Bank Case Study.. 240–244. 1 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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