Anne‐Katrin Emde

4.7k citations

19 papers · 1.1k indexed · h-index 14

Impact in

Cancer Research top 5%
- Cancer Genomics and Diagnostics
Hepatology top 5%
- Hepatocellular Carcinoma Treatment and Prognosis

Papers in

Cancer Research 7
- Cancer Genomics and Diagnostics 7
Genetics 6
- Genomics and Rare Diseases 4
- Genetic Associations and Epidemiology 2

Co-authors: Knut Reinert David Weese Vladimir Vacic Andreas Gogol‐Döring Tobias Rausch Nicolas Robine Søren Germer Caroline E. Gleason
Journals: Bioinformatics (5 papers)BMC Bioinformatics (2 papers)Human Genetics and Genomics Advances (1 paper)BMC Genomics (1 paper)Science (1 paper)
Partner nations: United States Germany South Africa

In The Last Decade

Anne‐Katrin Emde

18 papers receiving 1.1k citations

Peers

Countries citing papers authored by Anne‐Katrin Emde

Since Specialization

Citations

This map shows the geographic impact of Anne‐Katrin Emde's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Anne‐Katrin Emde with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Anne‐Katrin Emde more than expected).

Fields of papers citing papers by Anne‐Katrin Emde

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Anne‐Katrin Emde. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Anne‐Katrin Emde. The network helps show where Anne‐Katrin Emde may publish in the future.

Co-authors

The 25 scholars most cited alongside Anne‐Katrin Emde, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Anne‐Katrin Emde Line = papers co-authored together Anne‐Katrin Emde links everyone, so they are left out of the graph.

All Works

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19 of 19 papers shown

#	Work
1	Mid-pass whole-genome sequencing in a Malagasy cohort uncovers body composition associations Human Genetics and Genomics Advances ·Min-Hyuk Choi, Lene van Rootselaar, kathryn arnold, Manisha Tamta, Elis Syuhaila Binti Mokhtar, Millicent Dobbs Jordan, Martin Polack, 包春莹, G Carels, Feiyu Lu, Pablo Rochas, Mehreen R. Mughal, Anne‐Katrin Emde, Melissa Hendershott, Muhamad Mirfak Arfan, Kaja A. Wasik, Jean Freddy Ranaivoarisoa, Laura M. Yerges-Armstrong, Stephane E. Castel, Yifei Shen	2024	0
2	Mid-pass whole genome sequencing enables biomedical genetic studies of diverse populations BMC Genomics ·Anne‐Katrin Emde, Amanda Phipps‐Green, Murray Cadzow, Clair Gallagher, Tanya J. Major, Marilyn E. Merriman, Ruth Topless, Jialong Hao, Nicola Dalbeth, Rinki Murphy, Lisa K. Stamp, Janak de Zoysa, GR Bhojne, Keolu Fox, Kaja A. Wasik, Tony R. Merriman, Stephane E. Castel	2021	4
3	Genetic mechanisms of primary chemotherapy resistance in pediatric acute myeloid leukemia Leukemia ·Nicole McNeer, John Philip, Heather Geiger, Rhonda E. Ries, Vincent‐Philippe Lavallée, Michael F. Walsh, Minita Shah, Kanika Arora, Anne‐Katrin Emde, Nicolas Robine, Todd A. Alonzo, E. Anders Kolb, Alan S. Gamis, Malcolm A. Smith, Daniela S. Gerhard, F C. Birkbeck Terry, Soheil Meshinchi, Alex Kentsis	2019	77
4	Abstract 2870: Genetic mechanisms of primary chemotherapy resistance in pediatric acute myeloid leukemia Tumor Biology ·Nicole McNeer, John Philip, Heather Geiger, Rhonda E. Ries, Vincent‐Philippe Lavallée, Michael F. Walsh, Minita Shah, Kanika Arora, Anne‐Katrin Emde, Nicolas Robine, Todd A. Alonzo, E. Anders Kolb, Alan S. Gamis, Malcolm A. Smith, Daniela S. Gerhard, F C. Birkbeck Terry, Soheil Meshinchi, Alex Kentsis	2019	1
5	Genome-wide somatic variant calling using localized colored de Bruijn graphs Communications Biology ·Giuseppe Narzisi, André Corvelo, Kanika Arora, Ewa A. Bergmann, Minita Shah, Rajeeva Musunuri, Anne‐Katrin Emde, Nicolas Robine, Vladimir Vacic, Michael C. Zody	2018	62
6	Whole Genome Sequencing-Based Discovery of Structural Variants in Glioblastoma Methods in molecular biology ·Kazimierz O. Wrzeszczyński, Vanessa Felice, Minita Shah, Sadia Rahman, Anne‐Katrin Emde, Vaidehi Jobanputra, Mayu O. Frank, Robert B. Darnell	2018	10
7	Detection of a Recurrent DNAJB1-PRKACA Chimeric Transcript in Fibrolamellar Hepatocellular Carcinoma Science ·Joshua N. Honeyman, Elana P. Simon, Nicolas Robine, Rachel Chiaroni-Clarke, David G. Darcy, Irene Isabel P. Lim, Caroline E. Gleason, Jennifer M. Murphy, Brad R. Rosenberg, Olena Yatsenko, Constantin N. Takacs, Sergio Botero, R.L. Belote, Søren Germer, Anne‐Katrin Emde, Vladimir Vacic, Umesh Bhanot, Michael P. LaQuaglia, Sanford M. Simon	2014	327
8	Disease variants in genomes of 44 centenarians Molecular Genetics & Genomic Medicine ·Yun Freudenberg‐Hua, Jan Freudenberg, Vladimir Vacic, Avinash Abhyankar, Anne‐Katrin Emde, Danny Ben‐Avraham, Nir Barzilai, Dayna M. Oschwald, Liceth Natalia Moreno Cruz, Jeremy Koppel, Blaine Greenwald, Robert B. Darnell, Søren Germer, Gil Atzmon, Peter Davies	2014	51
9	Comparative sequencing analysis reveals high genomic concordance between matched primary and metastatic colorectal cancer lesions Genome Biology ·A. Rose Brannon, Mrs.Ramya Vasamsetti, Brooke E. Sylvester, Sasinya N. Scott, Kathy Adams, Ronak Shah, M. Coudray, Agnès Viale, Dayna M. Oschwald, Vladimir Vacic, Anne‐Katrin Emde, Andrea Cercek, Rona Yaeger, Nancy E. Kemeny, Leonard B. Saltz, Jinru Shia, Michael I. D’Angelica, Martin R. Weiser, David B. Solit, Michael F. Berger	2014	14
10	Comparative sequencing analysis reveals high genomic concordance between matched primary and metastatic colorectal cancer lesions Genome biology ·A. Rose Brannon, Efsevia Vakiani, Brooke E. Sylvester, Sasinya N. Scott, Gregory C McDermott, Ronak Shah, M. Coudray, Agnès Viale, Dayna M. Oschwald, Vladimir Vacic, Anne‐Katrin Emde, Andrea Cercek, Rona Yaeger, Nancy E. Kemeny, Leonard B. Saltz, Jinru Shia, Michael I. D’Angelica, Martin R. Weiser, David B. Solit, Michael F. Berger	2014	260
11	Gustaf: Detecting and correctly classifying SVs in the NGS twilight zone Bioinformatics ·Kathrin Trappe, Anne‐Katrin Emde, Hans‐Christian Ehrlich, Knut Reinert	2014	35
12	Detecting genomic indel variants with exact breakpoints in single- and paired-end sequencing data using SplazerS Bioinformatics ·Anne‐Katrin Emde, Marcel H. Schulz, David Weese, Ruping Sun, Martin Vingron, Vera M. Kalscheuer, Stefan A. Haas, Knut Reinert	2012	39
13	A novel and well-defined benchmarking method for second generation read mapping BMC Bioinformatics ·Manuel Holtgrewe, Anne‐Katrin Emde, David Weese, Knut Reinert	2011	54
14	RazerS—fast read mapping with sensitivity control Genome Research ·David Weese, Anne‐Katrin Emde, Tobias Rausch, Andreas Gogol‐Döring, Knut Reinert	2009	103
15	MicroRazerS: rapid alignment of small RNA reads Bioinformatics ·Anne‐Katrin Emde, Marcel Grunert, David Weese, Knut Reinert, Silke Sperling	2009	30
16	A consistency-based consensus algorithm for de novo and reference-guided sequence assembly of short reads Bioinformatics ·Tobias Rausch, Sergey Koren, Gennady Denisov, David Weese, Anne‐Katrin Emde, Andreas Gogol‐Döring, Knut Reinert	2009	22
17	Robust consensus computation BMC Bioinformatics ·Tobias Rausch, Anne‐Katrin Emde, Knut Reinert	2008	1
18	Segment-based multiple sequence alignment Bioinformatics ·Tobias Rausch, Anne‐Katrin Emde, David Weese, Andreas Gogol‐Döring, Cédric Notredame, Knut Reinert	2008	36
19	Analytical model of peptide mass cluster centres with applications. Proteome Science ·Witold Wolski, Malcolm Farrow, Anne‐Katrin Emde, Hans Lehrach, Maciej Łałowski, Knut Reinert	2006	22

About Anne‐Katrin Emde

Anne‐Katrin Emde is a scholar working on Cancer Research, Genetics, Molecular Biology, Hematology and Pathology and Forensic Medicine, having authored 19 papers that have together received 1.1k indexed citations. Recurring topics across this work include Genomics and Phylogenetic Studies (9 papers), Cancer Genomics and Diagnostics (7 papers), RNA and protein synthesis mechanisms (5 papers), Genomics and Rare Diseases (4 papers), Genetic factors in colorectal cancer (3 papers), Algorithms and Data Compression (3 papers), Genetic Associations and Epidemiology (2 papers) and Acute Myeloid Leukemia Research (2 papers). The work is most often cited by research in Cancer Research (389 citations), Hepatology (131 citations), Aging (21 citations), Pathology and Forensic Medicine (191 citations) and Oncology (271 citations). Anne‐Katrin Emde has collaborated with scholars based in United States, Germany and South Africa. Frequent co-authors include Knut Reinert, David Weese, Vladimir Vacic, Andreas Gogol‐Döring, Tobias Rausch, Nicolas Robine, Søren Germer, Caroline E. Gleason, Rachel Chiaroni-Clarke and Joshua N. Honeyman. Their work appears in journals such as Bioinformatics, BMC Bioinformatics, Human Genetics and Genomics Advances, BMC Genomics and Science.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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