Andrei L. Lomize

6.6k citations

63 papers · 4.9k indexed · 2 hit papers · h-index 28

Impact in

Cellular and Molecular Neuroscience top 1%
- Neuropeptides and Animal Physiology
- Photoreceptor and optogenetics research
Molecular Biology top 1%
- Lipid Membrane Structure and Behavior
- Receptor Mechanisms and Signaling
- Protein Structure and Dynamics
- RNA and protein synthesis mechanisms
- Chemical Synthesis and Analysis
- Ion channel regulation and function

Papers in

Cellular and Molecular Neuroscience 17
- Neuropeptides and Animal Physiology 10
- Photoreceptor and optogenetics research 7
Molecular Biology 54
- Protein Structure and Dynamics 26
- Lipid Membrane Structure and Behavior 26
- RNA and protein synthesis mechanisms 17
- Receptor Mechanisms and Signaling 8
- Chemical Synthesis and Analysis 7

Co-authors: Irina D. Pogozheva Henry I. Mosberg Hyeon Joo Alexander S. Arseniev Igor Barsukov V. F. Bystrov Yu.A. Ovchinnikov Carol Mousigian
Journals: Biophysical Journal (11 papers)Journal of Chemical Information and Modeling (7 papers)Protein Science (6 papers)Biopolymers (4 papers)Journal of Molecular Biology (4 papers)
Partner nations: United States Russia Canada

In The Last Decade

Andrei L. Lomize

63 papers receiving 4.8k citations

Hit Papers

align trajectories log scale

OPM database and PPM web server: resources for positioning of proteins in membranes 2011 · 1.5k citations

Peers

Countries citing papers authored by Andrei L. Lomize

Since Specialization

Citations

This map shows the geographic impact of Andrei L. Lomize's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Andrei L. Lomize with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Andrei L. Lomize more than expected).

Fields of papers citing papers by Andrei L. Lomize

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Andrei L. Lomize. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Andrei L. Lomize. The network helps show where Andrei L. Lomize may publish in the future.

Co-authors

The 25 scholars most cited alongside Andrei L. Lomize, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Andrei L. Lomize Line = papers co-authored together Andrei L. Lomize links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	OPRLM: A Web Tool and a Database for Positioning and Simulations of Proteins in Realistic Lipid Membranes Journal of Molecular Biology ·Sang‐Jun Park, Kyle A Schnitzer, Alexander Kovalenko, Stanislav Cherepanov, L. Ponoop Prasad Patro, Zigang Song, Irina D. Pogozheva, Andrei L. Lomize, Wonpil Im	2025	1
2	Comparative Molecular Dynamics Simulation Studies of Realistic Eukaryotic, Prokaryotic, and Archaeal Membranes Journal of Chemical Information and Modeling ·Irina D. Pogozheva, Grant Armstrong, Lingyang Kong, Timothy J. Hartnagel, Carly A. Carpino, Stephen E. Gee, Danielle M. Picarello, Amanda S. Rubin, Jumin Lee, Soohyung Park, Andrei L. Lomize, Wonpil Im	2022	60
3	TMPfold: A Web Tool for Predicting Stability of Transmembrane α-Helix Association Journal of Molecular Biology ·Andrei L. Lomize, Kevin A. Schnitzer, Irina D. Pogozheva	2019	4
4	PerMM: Web Server and Database for Prediction of Membrane Permeability and Translocation Pathways of Molecules Biophysical Journal ·Irina D. Pogozheva, Henry I. Mosberg, Andrei L. Lomize	2018	1
5	Prediction of Passive Membrane Permeability and Translocation Pathways of Biologically Active Molecules Biophysical Journal ·Andrei L. Lomize, Irina D. Pogozheva	2017	2
6	Membranome: A Database of Single-Spanning Transmembrane Proteins Biophysical Journal ·Andrei L. Lomize, Irina D. Pogozheva	2015	2
7	Structural Adaptation of Proteins to Different Biological Membranes Biophysical Journal ·Irina D. Pogozheva, Henry I. Mosberg, Andrei L. Lomize	2013	1
8	Large-Scale Computational Analysis of Protein Arrangement in the Lipid Bilayer Biophysical Journal ·Andrei L. Lomize, Irina D. Pogozheva, Henry I. Mosberg	2011	1
9	Cytotoxic potency of small macrocyclic knot proteins: Structure–activity and mechanistic studies of native and chemically modified cyclotides Organic & Biomolecular Chemistry ·Robert Burman, Anders Herrmann, Rossetti Tran, Jan-Erik Kivelä, Andrei L. Lomize, Joachim Gullbo, Ulf Göransson	2011	42
10	Membrane Topology of the Colicin E1 Channel Using Genetically Encoded Fluorescence Biochemistry ·Derek Ho, Miguel R. Lugo, Andrei L. Lomize, Irina D. Pogozheva, Suneel P. Singh, Adrian L. Schwan, A. Rod Merrill	2011	10
11	OPM database and PPM web server: resources for positioning of proteins in membranes Nucleic Acids Research ·Mikhail A. Lomize, Irina D. Pogozheva, Hyeon Joo, Henry I. Mosberg, Andrei L. Lomize Hit paper breakdown →	2011	1479
12	The Contribution of Surface Residues to Membrane Binding and Ligand Transfer by the α-Tocopherol Transfer Protein (α-TTP) Journal of Molecular Biology ·Wen Xiao Zhang, Varsha Thakur, Andrei L. Lomize, Irina D. Pogozheva, Candace Panagabko, Matt Cecchini, Matilda Baptist, Samantha Morley, Danny Manor, Jeffrey Atkinson	2010	26
13	Interatomic potentials and solvation parameters from protein engineering data for buried residues Protein Science ·Andrei L. Lomize, Mikhail Reibarkh, Irina D. Pogozheva	2002	35
14	Structural organization of G-protein-coupled receptors Journal of Computer-Aided Molecular Design ·Andrei L. Lomize, Irina D. Pogozheva, Henry I. Mosberg	1999	48
15	Development of a model for the δ-opioid receptor pharmacophore. 4. Residue 3 dehydrophenylalanine analogues of Tyr-c[D-Cys-Phe-D-Pen]OH (JOM-13) confirm required gauche orientation of aromatic side chain Biopolymers ·Henry I. Mosberg, Rajesh K. Dua, Irina D. Pogozheva, Andrei L. Lomize	1998	27
16	Thermodynamic model of secondary structure for α-helical peptides and proteins Biopolymers ·Andrei L. Lomize, Henry I. Mosberg	1997	24
17	The transmembrane 7-alpha-bundle of rhodopsin: distance geometry calculations with hydrogen bonding constraints Biophysical Journal ·Irina D. Pogozheva, Andrei L. Lomize, Henry I. Mosberg	1997	126
18	Development of a Model for the .delta. Opioid Receptor Pharmacophore. 1. Conformationally Restricted Tyr1 Replacements in the Cyclic .delta. Receptor Selective Tetrapeptide Tyr-c[D-Cys-Phe-D-Pen]OH (JOM-13) Journal of Medicinal Chemistry ·Henry I. Mosberg, Andrei L. Lomize, Chenguang Wang, Heather Kroona, Deborah Heyl, Katarzyna Sobczyk‐Kojiro, Wenli Ma, Carol Mousigian, Frank Porreca	1994	78
19	Three‐dimensional structure of proteolytic fragment 163–231 of bacterioopsin determined from nuclear magnetic resonance data in solution European Journal of Biochemistry ·Igor Barsukov, Dmitry E. Nolde, Andrei L. Lomize, Alexander S. Arseniev	1992	51
20	¹H‐NMR study of gramicidin A transmembrane ion channel FEBS Letters ·Alexander S. Arseniev, Igor Barsukov, V. F. Bystrov, Andrei L. Lomize, Yu.A. Ovchinnikov	1985	287

About Andrei L. Lomize

Andrei L. Lomize is a scholar working on Cellular and Molecular Neuroscience, Molecular Biology, Spectroscopy, Physical and Theoretical Chemistry and Microbiology, having authored 63 papers that have together received 4.9k indexed citations. Recurring topics across this work include Protein Structure and Dynamics (26 papers), Lipid Membrane Structure and Behavior (26 papers), RNA and protein synthesis mechanisms (17 papers), Neuropeptides and Animal Physiology (10 papers), Receptor Mechanisms and Signaling (8 papers), Chemical Synthesis and Analysis (7 papers), Photoreceptor and optogenetics research (7 papers) and Spectroscopy and Quantum Chemical Studies (6 papers). The work is most often cited by research in Cellular and Molecular Neuroscience (1.1k citations), Molecular Biology (4.0k citations), Microbiology (204 citations), Spectroscopy (429 citations) and Physiology (112 citations). Andrei L. Lomize has collaborated with scholars based in United States, Russia and Canada. Frequent co-authors include Irina D. Pogozheva, Henry I. Mosberg, Hyeon Joo, Alexander S. Arseniev, Igor Barsukov, V. F. Bystrov, Yu.A. Ovchinnikov, Carol Mousigian, Deborah Heyl and Dmitry E. Nolde. Their work appears in journals such as Biophysical Journal, Journal of Chemical Information and Modeling, Protein Science, Biopolymers and Journal of Molecular Biology.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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