Standout Papers

An automated method for finding molecular complexes in large protein interaction networ... 2001 2026 2009 2017 4.1k
  1. An automated method for finding molecular complexes in large protein interaction networks (2003)
    Gary D. Bader, Christopher W.V. Hogue BMC Bioinformatics
  2. The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function (2010)
    David Warde-Farley, Sylva L. Donaldson et al. Nucleic Acids Research
  3. Systematic Genetic Analysis with Ordered Arrays of Yeast Deletion Mutants (2001)
    Amy H.Y. Tong, Marie Evangelista et al. Science
  4. Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation (2010)
    Daniele Merico, Ruth Isserlin et al. PLoS ONE
  5. BIND--The Biomolecular Interaction Network Database (2001)
    Gary D. Bader Nucleic Acids Research
  6. A travel guide to Cytoscape plugins (2012)
    Rintaro Saito, Michael Smoot et al. Nature Methods
  7. Pathway enrichment analysis and visualization of omics data using g:Profiler, GSEA, Cytoscape and EnrichmentMap (2019)
    Jüri Reimand, Ruth Isserlin et al. Nature Protocols
  8. GeneMANIA update 2018 (2018)
    Max Franz, Harold Rodriguez et al. Nucleic Acids Research
  9. BIND: the Biomolecular Interaction Network Database (2003)
    Gary D. Bader Nucleic Acids Research
  10. Biological Network Exploration with Cytoscape 3 (2014)
    Gang Su, John H. Morris et al. Current Protocols in Bioinformatics
  11. Pathway Commons, a web resource for biological pathway data (2010)
    Ethan Cerami, Benjamin Groß et al. Nucleic Acids Research
  12. Cytoscape Web: an interactive web-based network browser (2010)
    Christian Lopes, Max Franz et al. Bioinformatics
  13. A Combined Experimental and Computational Strategy to Define Protein Interaction Networks for Peptide Recognition Modules (2002)
    Amy H.Y. Tong, Becky Drees et al. Science
  14. Cytoscape.js: a graph theory library for visualisation and analysis (2015)
    Max Franz, Christian Lopes et al. Bioinformatics
  15. Single-cell transcriptomic profiling of the aging mouse brain (2019)
    Methodios Ximerakis, Scott Lipnick et al. Nature Neuroscience

Immediate Impact

2 by Nobel laureates 46 from Science/Nature 119 standout
Sub-graph 1 of 19

Citing Papers

Acquisition of epithelial plasticity in human chronic liver disease
2024 StandoutNature
cGAS–STING drives ageing-related inflammation and neurodegeneration
2023 StandoutNature
1 intermediate paper

Works of Gary D. Bader being referenced

Single-cell transcriptomic profiling of the aging mouse brain
2019 Standout
Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation
2010 Standout
and 1 more

Author Peers

Author Last Decade Papers Cites
Gary D. Bader 21988 4263 2396 2573 199 30.1k
Judith A. Blake 25570 3667 1565 4839 124 35.7k
Alexander Röth 15135 3354 1787 2255 71 24.1k
Nitin S. Baliga 25778 5741 2158 3763 140 40.2k
Hidemasa Bono 18882 3583 1520 2916 101 27.9k
Avi Ma’ayan 16265 3494 2949 2387 184 28.2k
Janan T. Eppig 25548 3692 1611 5776 105 35.9k
Andrew Kasarskis 21819 3357 1469 4190 80 32.5k
John N. Weinstein 22309 6939 6763 1870 317 33.9k
Susumu Goto 30569 4841 1986 4227 139 45.6k
J. Michael Cherry 28190 3970 1624 5231 91 38.7k

All Works

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2026