Zohar Shipony

4.9k total citations · 1 hit paper
17 papers, 1.7k citations indexed

About

Zohar Shipony is a scholar working on Molecular Biology, Immunology and Oncology. According to data from OpenAlex, Zohar Shipony has authored 17 papers receiving a total of 1.7k indexed citations (citations by other indexed papers that have themselves been cited), including 15 papers in Molecular Biology, 3 papers in Immunology and 2 papers in Oncology. Recurrent topics in Zohar Shipony's work include Genomics and Chromatin Dynamics (8 papers), RNA modifications and cancer (5 papers) and Epigenetics and DNA Methylation (5 papers). Zohar Shipony is often cited by papers focused on Genomics and Chromatin Dynamics (8 papers), RNA modifications and cancer (5 papers) and Epigenetics and DNA Methylation (5 papers). Zohar Shipony collaborates with scholars based in United States, Israel and Germany. Zohar Shipony's co-authors include William J. Greenleaf, Sandy Klemm, Guy Shakhar, Lai Guan Ng, Orna Tal, Irina Gurevich, Hwee Ying Lim, Idan Milo, Véronique Angeli and Georgi K. Marinov and has published in prestigious journals such as Nature, The Journal of Experimental Medicine and Genes & Development.

In The Last Decade

Zohar Shipony

16 papers receiving 1.7k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Chromatin accessibility and the regulatory epigenome

2019 1.0k citations Sandy Klemm, Zohar Shipony et al. Nature Reviews Genetics profile →

Peers

Zohar Shipony

MB

IMMUN

ONCOL

PS

CR

Giovanna Ambrosini Switzerland

Xiushan Wu China

Bruno Di Stefano United States

Tobias Neumann Austria

Delphine Potier Belgium

Ian J. Donaldson United Kingdom

Jennifer Whangbo United States

Allen W. Zhang Canada

Junling Jia China

Yoichiro Shibata United States

Giovanna Ambrosini Switzerland

Zohar Shipony

1.3k ×1.1

MB

172 ×0.6

IMMUN

206 ×0.9

ONCOL

129 ×0.6

PS

276 ×1.4

CR

Citations per year, relative to Zohar Shipony Zohar Shipony (= 1×) peers Giovanna Ambrosini

Countries citing papers authored by Zohar Shipony

Since Specialization

Citations

This map shows the geographic impact of Zohar Shipony's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Zohar Shipony with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Zohar Shipony more than expected).

Fields of papers citing papers by Zohar Shipony

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Zohar Shipony. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Zohar Shipony. The network helps show where Zohar Shipony may publish in the future.

Co-authorship network of co-authors of Zohar Shipony

This figure shows the co-authorship network connecting the top 25 collaborators of Zohar Shipony. A scholar is included among the top collaborators of Zohar Shipony based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Zohar Shipony. Zohar Shipony is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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17 of 17 papers shown

1.

Zhao, Sen, Shenglan Li, Jill A. Rosenfeld, et al.. (2025). The utility of ultra-deep RNA sequencing in Mendelian disorder diagnostics. The American Journal of Human Genetics. 112(11). 2578–2590.

2.

Nichols, Ruth V., Lauren Rylaarsdam, Brendan L. O’Connell, et al.. (2024). Atlas-scale single-cell DNA methylation profiling with sciMETv3. Cell Genomics. 5(1). 100726–100726. 3 indexed citations

3.

Marinov, Georgi K., Zohar Shipony, Anshul Kundaje, & William J. Greenleaf. (2022). Genome-Wide Mapping of Active Regulatory Elements Using ATAC-seq. Methods in molecular biology. 2611. 3–19. 4 indexed citations

4.

Marinov, Georgi K., Zohar Shipony, Anshul Kundaje, & William J. Greenleaf. (2022). Single-Molecule Multikilobase-Scale Profiling of Chromatin Accessibility Using m6A-SMAC-Seq and m6A-CpG-GpC-SMAC-Seq. Methods in molecular biology. 2458. 269–298. 3 indexed citations

5.

Marinov, Georgi K., et al.. (2022). Simultaneous Single-Cell Profiling of the Transcriptome and Accessible Chromatin Using SHARE-seq. Methods in molecular biology. 2611. 187–230. 4 indexed citations

6.

King, Hamish W., Kristen L. Wells, Zohar Shipony, et al.. (2021). Integrated single-cell transcriptomics and epigenomics reveals strong germinal center–associated etiology of autoimmune risk loci. Science Immunology. 6(64). eabh3768–eabh3768. 21 indexed citations

7.

Blacher, Eran, Connie Tsai, Lev Litichevskiy, et al.. (2021). Aging disrupts circadian gene regulation and function in macrophages. Nature Immunology. 23(2). 229–236. 108 indexed citations

8.

Chang, Chiung-Ying, Zohar Shipony, Sherry Lin, et al.. (2021). Increased ACTL6A occupancy within mSWI/SNF chromatin remodelers drives human squamous cell carcinoma. Molecular Cell. 81(24). 4964–4978.e8. 23 indexed citations

9.

Shipony, Zohar, et al.. (2021). An optimized ATAC-seq protocol for genome-wide mapping of active regulatory elements in primary mouse cortical neurons. STAR Protocols. 2(4). 100854–100854. 4 indexed citations

10.

Marinov, Georgi K. & Zohar Shipony. (2021). Interrogating the Accessible Chromatin Landscape of Eukaryote Genomes Using ATAC-seq. Methods in molecular biology. 2243. 183–226. 16 indexed citations

11.

Shipony, Zohar, Georgi K. Marinov, Matthew P. Swaffer, et al.. (2020). Long-range single-molecule mapping of chromatin accessibility in eukaryotes. Nature Methods. 17(3). 319–327. 84 indexed citations

12.

Shipony, Zohar, Masha Kolesnikov, Camila Avivi, et al.. (2019). Reduced CTL motility and activity in avascular tumor areas. Cancer Immunology Immunotherapy. 68(8). 1287–1301. 25 indexed citations

13.

Klemm, Sandy, Zohar Shipony, & William J. Greenleaf. (2019). Chromatin accessibility and the regulatory epigenome. Nature Reviews Genetics. 20(4). 207–220. 1001 indexed citations breakdown →

14.

Tovy, Ayala, Adam Spiro, Ryan L. McCarthy, et al.. (2017). p53 is essential for DNA methylation homeostasis in naïve embryonic stem cells, and its loss promotes clonal heterogeneity. Genes & Development. 31(10). 959–972. 45 indexed citations

15.

Shipony, Zohar, Zohar Mukamel, Netta Mendelson Cohen, et al.. (2014). Dynamic and static maintenance of epigenetic memory in pluripotent and somatic cells. Nature. 513(7516). 115–119. 113 indexed citations

16.

Zeevi, Danny, Eilon Sharon, Maya Lotan‐Pompan, et al.. (2011). Compensation for differences in gene copy number among yeast ribosomal proteins is encoded within their promoters. Genome Research. 21(12). 2114–2128. 39 indexed citations

17.

Tal, Orna, Hwee Ying Lim, Irina Gurevich, et al.. (2011). DC mobilization from the skin requires docking to immobilized CCL21 on lymphatic endothelium and intralymphatic crawling. The Journal of Experimental Medicine. 208(10). 2141–2153. 219 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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