Vivek Bhardwaj

12.3k total citations · 3 hit papers
19 papers, 6.0k citations indexed

About

Vivek Bhardwaj is a scholar working on Molecular Biology, Surgery and Biophysics. According to data from OpenAlex, Vivek Bhardwaj has authored 19 papers receiving a total of 6.0k indexed citations (citations by other indexed papers that have themselves been cited), including 15 papers in Molecular Biology, 2 papers in Surgery and 2 papers in Biophysics. Recurrent topics in Vivek Bhardwaj's work include Genomics and Phylogenetic Studies (5 papers), Single-cell and spatial transcriptomics (4 papers) and Genomics and Chromatin Dynamics (4 papers). Vivek Bhardwaj is often cited by papers focused on Genomics and Phylogenetic Studies (5 papers), Single-cell and spatial transcriptomics (4 papers) and Genomics and Chromatin Dynamics (4 papers). Vivek Bhardwaj collaborates with scholars based in Germany, India and Netherlands. Vivek Bhardwaj's co-authors include Thomas Manke, Fidel Ramírez, Björn Grüning, Devon Ryan, Andreas S. Richter, Fabian Kilpert, Steffen Heyne, Friederike Dündar, Asifa Akhtar and Rolf Backofen and has published in prestigious journals such as Nature, Nucleic Acids Research and Nature Communications.

In The Last Decade

Vivek Bhardwaj

17 papers receiving 6.0k citations

Hit Papers

align trajectories sort by overperformance

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

deepTools2: a next generation web server for deep-sequencing data analysis

2016 4.4k citations Fidel Ramírez, Devon Ryan et al. Nucleic Acids Research profile →
High-resolution TADs reveal DNA sequences underlying genome organization in flies

2018 543 citations Fidel Ramírez, Vivek Bhardwaj et al. Nature Communications profile →
DHX9 suppresses RNA processing defects originating from the Alu invasion of the human genome

2017 422 citations Tuğçe Aktaş, İbrahim Ilik et al. Nature profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Vivek Bhardwaj Germany	11	5.0k	1.3k	821	704	553	19	6.0k
Friederike Dündar United States	10	5.6k 1.1×	1.4k 1.1×	717 0.9×	854 1.2×	773 1.4×	16	7.0k
Andreas S. Richter Germany	16	5.0k 1.0×	1.0k 0.8×	619 0.8×	1.0k 1.4×	496 0.9×	21	6.1k
Fabian Kilpert Germany	14	4.1k 0.8×	942 0.7×	476 0.6×	641 0.9×	492 0.9×	18	5.2k
Steffen Heyne Germany	10	4.1k 0.8×	936 0.7×	513 0.6×	628 0.9×	466 0.8×	14	5.1k
Devon Ryan Germany	12	4.2k 0.8×	933 0.7×	481 0.6×	569 0.8×	452 0.8×	19	5.1k
Alla A. Sigova United States	14	5.6k 1.1×	1.2k 0.9×	1.4k 1.6×	591 0.8×	513 0.9×	20	6.4k
David A. Orlando United States	20	7.1k 1.4×	1.5k 1.2×	1.0k 1.2×	873 1.2×	541 1.0×	37	8.2k
Andrew C. Adey United States	28	5.5k 1.1×	906 0.7×	1.3k 1.6×	1000 1.4×	661 1.2×	53	7.0k
Sarah J. Wheelan United States	34	3.1k 0.6×	865 0.7×	581 0.7×	705 1.0×	317 0.6×	84	4.2k
Emily Hodges United States	31	3.8k 0.8×	1.5k 1.2×	1.1k 1.3×	1.1k 1.6×	515 0.9×	77	5.9k

Countries citing papers authored by Vivek Bhardwaj

Since Specialization

Citations

This map shows the geographic impact of Vivek Bhardwaj's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Vivek Bhardwaj with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Vivek Bhardwaj more than expected).

Fields of papers citing papers by Vivek Bhardwaj

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Vivek Bhardwaj. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Vivek Bhardwaj. The network helps show where Vivek Bhardwaj may publish in the future.

Co-authorship network of co-authors of Vivek Bhardwaj

This figure shows the co-authorship network connecting the top 25 collaborators of Vivek Bhardwaj. A scholar is included among the top collaborators of Vivek Bhardwaj based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Vivek Bhardwaj. Vivek Bhardwaj is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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19 of 19 papers shown

Pal, Amit, et al.. (2025). Alfalfa (Medicago sativa) and neurodegeneration: mechanistic insights into oxidative stress, inflammation, and neuronal survival pathways. Molecular Biology Reports. 52(1). 758–758. 1 indexed citations

Blotenburg, Marloes, Daniel V. Bax, Jan Visser, et al.. (2025). Stem cell culture conditions affect in vitro differentiation potential and mouse gastruloid formation. PLoS ONE. 20(3). e0317309–e0317309. 3 indexed citations

Bhardwaj, Vivek, et al.. (2025). ABCA12 and stress: a molecular insight into lipid transport and cellular resilience. Psychopharmacology.

Bhardwaj, Vivek, et al.. (2024). Smart cities and the IoT: an in-depth analysis of global research trends and future directions. SHILAP Revista de lepidopterología. 4(1). 3 indexed citations

Bhardwaj, Vivek, et al.. (2024). Single-Cell Histone Modification Profiling with Cell Enrichment Using sortChIC. Methods in molecular biology. 2846. 215–241.

Zeller, Peter, Jake Yeung, Buys de Barbanson, et al.. (2022). Single-cell sortChIC identifies hierarchical chromatin dynamics during hematopoiesis. Nature Genetics. 55(2). 333–345. 30 indexed citations

Jambor, Helena, Alberto Antonietti, Bradly Alicea, et al.. (2021). Creating clear and informative image-based figures for scientific publications. PLoS Biology. 19(3). e3001161–e3001161. 34 indexed citations

Lopez‐Delisle, Lucille, Leily Rabbani, Joachim Wolff, et al.. (2020). pyGenomeTracks: reproducible plots for multivariate genomic datasets . Bioinformatics. 37(3). 422–423. 247 indexed citations

Ferling, Iuliia, Steven Burgess, Vivek Bhardwaj, et al.. (2020). Meta-Research: Creating clear and informative image-based figures for scientific publications. OSF Preprints (OSF Preprints). 2 indexed citations

10.

Bhardwaj, Vivek, Steffen Heyne, Katarzyna Sikora, et al.. (2019). snakePipes: facilitating flexible, scalable and integrative epigenomic analysis. Bioinformatics. 35(22). 4757–4759. 105 indexed citations

11.

Bhardwaj, Vivek, et al.. (2019). MAPCap allows high-resolution detection and differential expression analysis of transcription start sites. Nature Communications. 10(1). 3219–3219. 14 indexed citations

12.

Lam, Kin Chung, Ho‐Ryun Chung, Giuseppe Semplicio, et al.. (2019). The NSL complex-mediated nucleosome landscape is required to maintain transcription fidelity and suppression of transcription noise. Genes & Development. 33(7-8). 452–465. 10 indexed citations

13.

Ramírez, Fidel, Vivek Bhardwaj, Laura Arrigoni, et al.. (2018). High-resolution TADs reveal DNA sequences underlying genome organization in flies. Nature Communications. 9(1). 189–189. 543 indexed citations breakdown →

14.

Wolff, Joachim, Vivek Bhardwaj, Gautier Richard, et al.. (2018). Galaxy HiCExplorer: a web server for reproducible Hi-C data analysis, quality control and visualization. Nucleic Acids Research. 46(W1). W11–W16. 153 indexed citations

15.

Aktaş, Tuğçe, İbrahim Ilik, Daniel Maticzka, et al.. (2017). DHX9 suppresses RNA processing defects originating from the Alu invasion of the human genome. Nature. 544(7648). 115–119. 422 indexed citations breakdown →

16.

Pandey, Rajesh, et al.. (2016). Alu-miRNA interactions modulate transcript isoform diversity in stress response and reveal signatures of positive selection. Scientific Reports. 6(1). 32348–32348. 15 indexed citations

17.

Ramírez, Fidel, Devon Ryan, Björn Grüning, et al.. (2016). deepTools2: a next generation web server for deep-sequencing data analysis. Nucleic Acids Research. 44(W1). W160–W165. 4364 indexed citations breakdown →

18.

Sheikh, Bilal N., Wibke Bechtel‐Walz, Jacopo Lucci, et al.. (2015). MOF maintains transcriptional programs regulating cellular stress response. Oncogene. 35(21). 2698–2710. 52 indexed citations

19.

Tiwari, Pradeep Kumar, Kandarp Joshi, Rakhshinda Rehman, et al.. (2014). Draft Genome Sequence of Urease-Producing Sporosarcina pasteurii with Potential Application in Biocement Production. Genome Announcements. 2(1). 9 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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