Tomáš Čermák

8.4k total citations · 6 hit papers
21 papers, 6.0k citations indexed

About

Tomáš Čermák is a scholar working on Molecular Biology, Plant Science and Genetics. According to data from OpenAlex, Tomáš Čermák has authored 21 papers receiving a total of 6.0k indexed citations (citations by other indexed papers that have themselves been cited), including 20 papers in Molecular Biology, 16 papers in Plant Science and 2 papers in Genetics. Recurrent topics in Tomáš Čermák's work include CRISPR and Genetic Engineering (16 papers), Plant Virus Research Studies (11 papers) and Chromosomal and Genetic Variations (10 papers). Tomáš Čermák is often cited by papers focused on CRISPR and Genetic Engineering (16 papers), Plant Virus Research Studies (11 papers) and Chromosomal and Genetic Variations (10 papers). Tomáš Čermák collaborates with scholars based in United States, Czechia and China. Tomáš Čermák's co-authors include Daniel F. Voytas, Erin Doyle, Adam J. Bogdanove, Clarice Schmidt, Michelle Christian, Yong Zhang, Aaron W. Hummel, Joshua A. Baller, Nikunj V. Somia and Feng Zhang and has published in prestigious journals such as Nucleic Acids Research, Nature Biotechnology and The Plant Cell.

In The Last Decade

Tomáš Čermák

21 papers receiving 5.8k citations

Hit Papers

5 papers align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting

2011 1.6k citations Tomáš Čermák, Erin Doyle et al. Nucleic Acids Research profile →
Targeting DNA Double-Strand Breaks with TAL Effector Nucleases

2010 1.4k citations Michelle Christian, Tomáš Čermák et al. Genetics profile →
De novo domestication of wild tomato using genome editing

2018 535 citations Agustín Zsögön, Tomáš Čermák et al. Nature Biotechnology profile →
A Multipurpose Toolkit to Enable Advanced Genome Engineering in Plants

2017 454 citations Tomáš Čermák, Shaun J. Curtin et al. The Plant Cell profile →
High-frequency, precise modification of the tomato genome

2015 445 citations Tomáš Čermák, Nicholas J. Baltes et al. Genome biology profile →
DNA Replicons for Plant Genome Engineering

2014 367 citations Nicholas J. Baltes, Javier Gil‐Humanes et al. The Plant Cell profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Tomáš Čermák United States	17	5.1k	2.9k	1.2k	523	375	21	6.0k
Colby G. Starker United States	34	4.0k 0.8×	3.1k 1.1×	620 0.5×	352 0.7×	359 1.0×	47	5.7k
Michelle Christian United States	9	3.6k 0.7×	1.2k 0.4×	1.0k 0.9×	217 0.4×	158 0.4×	10	4.1k
Adam J. Bogdanove United States	42	7.0k 1.4×	6.6k 2.3×	1.7k 1.4×	465 0.9×	319 0.9×	87	11.9k
Seung Woo Cho South Korea	16	6.5k 1.3×	1.2k 0.4×	1.3k 1.1×	458 0.9×	190 0.5×	25	7.0k
Luke W. Koblan United States	15	7.5k 1.5×	1.1k 0.4×	2.3k 1.9×	402 0.8×	201 0.5×	19	8.0k
Clarice Schmidt United States	13	2.9k 0.6×	1.0k 0.4×	742 0.6×	146 0.3×	112 0.3×	19	3.5k
Cyd Khayter United States	11	6.1k 1.2×	771 0.3×	1.4k 1.2×	401 0.8×	108 0.3×	11	6.5k
Alexander A. Sousa United States	11	5.1k 1.0×	763 0.3×	1.4k 1.2×	331 0.6×	125 0.3×	13	5.4k
Kent G. Golic United States	27	4.6k 0.9×	1.2k 0.4×	1.1k 1.0×	397 0.8×	85 0.2×	49	5.4k

Countries citing papers authored by Tomáš Čermák

Since Specialization

Citations

This map shows the geographic impact of Tomáš Čermák's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Tomáš Čermák with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Tomáš Čermák more than expected).

Fields of papers citing papers by Tomáš Čermák

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Tomáš Čermák. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Tomáš Čermák. The network helps show where Tomáš Čermák may publish in the future.

Co-authorship network of co-authors of Tomáš Čermák

This figure shows the co-authorship network connecting the top 25 collaborators of Tomáš Čermák. A scholar is included among the top collaborators of Tomáš Čermák based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Tomáš Čermák. Tomáš Čermák is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Čermák, Tomáš. (2021). Sequence modification on demand: search and replace tools for precise gene editing in plants. Transgenic Research. 30(4). 353–379. 6 indexed citations

Zsögön, Agustín, Tomáš Čermák, Emmanuel Rezende Naves, et al.. (2018). De novo domestication of wild tomato using genome editing. Nature Biotechnology. 36(12). 1211–1216. 535 indexed citations breakdown →

Čegan, Radim, Tomáš Čermák, Karel Doležal, et al.. (2018). Agrobacterium rhizogenes-mediated transformation of a dioecious plant model Silene latifolia. New Biotechnology. 48. 20–28. 20 indexed citations

Macovei, Anca, Gilda Jonson, Inez H. Slamet‐Loedin, et al.. (2018). Novel alleles of rice eIF4G generated by CRISPR/Cas9‐targeted mutagenesis confer resistance to Rice tungro spherical virus. Plant Biotechnology Journal. 16(11). 1918–1927. 233 indexed citations

Čermák, Tomáš, Shaun J. Curtin, Javier Gil‐Humanes, et al.. (2017). A Multipurpose Toolkit to Enable Advanced Genome Engineering in Plants. The Plant Cell. 29(6). 1196–1217. 454 indexed citations breakdown →

Čermák, Tomáš & Shaun J. Curtin. (2017). Design and Assembly of CRISPR/Cas9 Reagents for Gene Knockout, Targeted Insertion, and Replacement in Wheat. Methods in molecular biology. 1679. 187–212. 7 indexed citations

Hummel, Aaron W., Raj Deepika Chauhan, Tomáš Čermák, et al.. (2017). Allele exchange at the EPSPS locus confers glyphosate tolerance in cassava. Plant Biotechnology Journal. 16(7). 1275–1282. 114 indexed citations

Zsögön, Agustín, Tomáš Čermák, Daniel F. Voytas, & Lázaro Eustáquio Pereira Peres. (2016). Genome editing as a tool to achieve the crop ideotype and de novo domestication of wild relatives: Case study in tomato. Plant Science. 256. 120–130. 113 indexed citations

Nishizawa‐Yokoi, Ayako, Tomáš Čermák, Tomoki Hoshino, et al.. (2015). A Defect in DNA Ligase4 Enhances the Frequency of TALEN-Mediated Targeted Mutagenesis in Rice. PLANT PHYSIOLOGY. 170(2). 653–666. 42 indexed citations

10.

Čermák, Tomáš, Nicholas J. Baltes, Radim Čegan, Yong Zhang, & Daniel F. Voytas. (2015). High-frequency, precise modification of the tomato genome. Genome biology. 16(1). 232–232. 445 indexed citations breakdown →

11.

Baltes, Nicholas J., Javier Gil‐Humanes, Tomáš Čermák, Paul Atkins, & Daniel F. Voytas. (2014). DNA Replicons for Plant Genome Engineering . The Plant Cell. 26(1). 151–163. 367 indexed citations breakdown →

12.

Čermák, Tomáš, Colby G. Starker, & Daniel F. Voytas. (2014). Efficient Design and Assembly of Custom TALENs Using the Golden Gate Platform. Methods in molecular biology. 1239. 133–159. 37 indexed citations

13.

Kubát, Zdeněk, Jitka Žlůvová, Ivan Vogel, et al.. (2014). Possible mechanisms responsible for absence of a retrotransposon family on a plant Y chromosome. New Phytologist. 202(2). 662–678. 33 indexed citations

14.

Hermann, Mario, Tomáš Čermák, Daniel F. Voytas, & Paweł Pelczar. (2014). Mouse Genome Engineering Using Designer Nucleases. Journal of Visualized Experiments. 13 indexed citations

15.

Hermann, Mario, Tomáš Čermák, Daniel F. Voytas, & Paweł Pelczar. (2014). Mouse Genome Engineering Using Designer Nucleases. Journal of Visualized Experiments. 6 indexed citations

16.

Čermák, Tomáš, Erin Doyle, Michelle Christian, et al.. (2011). Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting. Nucleic Acids Research. 39(12). e82–e82. 1577 indexed citations breakdown →

17.

Čermák, Tomáš, Erin Doyle, Libo Wang, et al.. (2011). Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting. Nucleic Acids Research. 39(17). 7879–7879. 228 indexed citations

18.

Christian, Michelle, Tomáš Čermák, Erin Doyle, et al.. (2010). Targeting DNA Double-Strand Breaks with TAL Effector Nucleases. Genetics. 186(2). 757–761. 1415 indexed citations breakdown →

19.

Kejnovský, Eduard, Roman Hobza, Tomáš Čermák, Zdeněk Kubát, & Boris Vyskot. (2009). The role of repetitive DNA in structure and evolution of sex chromosomes in plants. Heredity. 102(6). 533–541. 125 indexed citations

20.

Čermák, Tomáš, Zdeněk Kubát, Roman Hobza, et al.. (2008). Survey of repetitive sequences in Silene latifolia with respect to their distribution on sex chromosomes. Chromosome Research. 16(7). 961–976. 90 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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