T.A. Binkowski

2.9k total citations · 1 hit paper
25 papers, 2.2k citations indexed

About

T.A. Binkowski is a scholar working on Molecular Biology, Materials Chemistry and Computational Theory and Mathematics. According to data from OpenAlex, T.A. Binkowski has authored 25 papers receiving a total of 2.2k indexed citations (citations by other indexed papers that have themselves been cited), including 19 papers in Molecular Biology, 7 papers in Materials Chemistry and 4 papers in Computational Theory and Mathematics. Recurrent topics in T.A. Binkowski's work include Protein Structure and Dynamics (10 papers), Enzyme Structure and Function (7 papers) and Computational Drug Discovery Methods (4 papers). T.A. Binkowski is often cited by papers focused on Protein Structure and Dynamics (10 papers), Enzyme Structure and Function (7 papers) and Computational Drug Discovery Methods (4 papers). T.A. Binkowski collaborates with scholars based in United States, China and Australia. T.A. Binkowski's co-authors include Jie Liang, A. Joachimiak, Larisa Adamian, Kathryn M. Rich, Diana Franklin, Rongguang Zhang, Paul Freeman, Rosemarie Wilton, Olaf Schneewind and Justin W. Kern and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Nucleic Acids Research and Journal of Biological Chemistry.

In The Last Decade

T.A. Binkowski

25 papers receiving 2.1k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

CASTp: Computed Atlas of Surface Topography of proteins

2003 1.4k citations T.A. Binkowski Nucleic Acids Research profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
T.A. Binkowski United States	17	1.4k	413	302	193	153	25	2.2k
Elizabeth Yuriev Australia	27	1.5k 1.1×	662 1.6×	212 0.7×	63 0.3×	40 0.3×	91	2.7k
Chen Li China	33	2.2k 1.6×	230 0.6×	78 0.3×	117 0.6×	34 0.2×	192	3.6k
Ricardo Nascimento dos Santos Brazil	11	1.0k 0.7×	755 1.8×	137 0.5×	139 0.7×	10 0.1×	21	2.0k
Diogo M. Camacho United States	17	2.4k 1.7×	177 0.4×	122 0.4×	213 1.1×	9 0.1×	23	3.7k
Srivatsan Raman United States	25	2.9k 2.0×	247 0.6×	642 2.1×	138 0.7×	7 0.0×	47	3.7k
Luciano A. Abriata Switzerland	28	1.7k 1.2×	69 0.2×	349 1.2×	101 0.5×	14 0.1×	93	2.7k
Justin B. Siegel United States	24	2.0k 1.4×	95 0.2×	385 1.3×	12 0.1×	46 0.3×	77	2.7k
John Ingraham United States	17	1.6k 1.2×	150 0.4×	247 0.8×	62 0.3×	17 0.1×	20	2.0k
José M. Duarte United States	24	1.5k 1.1×	357 0.9×	477 1.6×	115 0.6×	4 0.0×	46	2.1k
Jasmine Young United States	16	1.8k 1.3×	505 1.2×	521 1.7×	104 0.5×	4 0.0×	31	2.3k

Countries citing papers authored by T.A. Binkowski

Since Specialization

Citations

This map shows the geographic impact of T.A. Binkowski's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by T.A. Binkowski with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites T.A. Binkowski more than expected).

Fields of papers citing papers by T.A. Binkowski

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by T.A. Binkowski. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by T.A. Binkowski. The network helps show where T.A. Binkowski may publish in the future.

Co-authorship network of co-authors of T.A. Binkowski

This figure shows the co-authorship network connecting the top 25 collaborators of T.A. Binkowski. A scholar is included among the top collaborators of T.A. Binkowski based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with T.A. Binkowski. T.A. Binkowski is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Rich, Kathryn M., et al.. (2017). K-8 Learning Trajectories Derived from Research Literature. 182–190. 64 indexed citations

Marino, Susana R., T.A. Binkowski, Michael Haagenson, et al.. (2016). Identification of high-risk amino-acid substitutions in hematopoietic cell transplantation: a challenging task. Bone Marrow Transplantation. 51(10). 1342–1349. 7 indexed citations

Maheshwari, Ketan, Justin M. Wozniak, Timothy G. Armstrong, et al.. (2015). Porting Ordinary Applications to Blue Gene/Q Supercomputers. OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information). 128. 420–428. 1 indexed citations

Tan, Kemin, et al.. (2014). Sensor Domain of Histidine Kinase KinB of Pseudomonas. Journal of Biological Chemistry. 289(18). 12232–12244. 11 indexed citations

Binkowski, T.A., Wei Jiang, Benoı̂t Roux, W.F. Anderson, & A. Joachimiak. (2014). Virtual High-Throughput Ligand Screening. Methods in molecular biology. 1140. 251–261. 11 indexed citations

Borchers, Christoph H., Jürgen Kast, Leonard J. Foster, et al.. (2013). The Human Proteome Organization Chromosome 6 Consortium: Integrating chromosome-centric and biology/disease driven strategies. Journal of Proteomics. 100. 60–67. 10 indexed citations

Binkowski, T.A., Susana R. Marino, & A. Joachimiak. (2012). Predicting HLA Class I Non-Permissive Amino Acid Residues Substitutions. PLoS ONE. 7(8). e41710–e41710. 23 indexed citations

Marino, Susana R., Sheldon S. Lin, Martin Maiers, et al.. (2011). Identification by random forest method of HLA class I amino acid substitutions associated with lower survival at day 100 in unrelated donor hematopoietic cell transplantation. Bone Marrow Transplantation. 47(2). 217–226. 26 indexed citations

Kern, Justin W., Rosemarie Wilton, Rongguang Zhang, et al.. (2011). Structure of Surface Layer Homology (SLH) Domains from Bacillus anthracis Surface Array Protein. Journal of Biological Chemistry. 286(29). 26042–26049. 71 indexed citations

10.

Binkowski, T.A., M.E. Cuff, B. Nocek, Changsoo Chang, & A. Joachimiak. (2010). Assisted assignment of ligands corresponding to unknown electron density. Journal of Structural and Functional Genomics. 11(1). 21–30. 4 indexed citations

11.

Liang, Jie, Yan Yuan Tseng, Joseph Dundas, et al.. (2008). Predicting and Characterizing Protein Functions Through Matching Geometric and Evolutionary Patterns of Binding Surfaces. Advances in protein chemistry and structural biology. 75. 107–141. 3 indexed citations

12.

Kim, Youngchang, et al.. (2008). Crystal structure of fatty acid/phospholipid synthesis protein PlsX from Enterococcus faecalis. Journal of Structural and Functional Genomics. 10(2). 157–163. 16 indexed citations

13.

Binkowski, T.A. & A. Joachimiak. (2008). Protein Functional Surfaces: Global Shape Matching and Local Spatial Alignments of Ligand Binding Sites. BMC Structural Biology. 8(1). 45–45. 53 indexed citations

14.

Zhang, Rongguang, et al.. (2008). The 1.38 Å crystal structure of DmsD protein from Salmonella typhimurium, a proofreading chaperone on the Tat pathway. Proteins Structure Function and Bioinformatics. 71(2). 525–533. 26 indexed citations

15.

Binkowski, T.A., et al.. (2007). Topology independent protein structural alignment. BMC Bioinformatics. 8(1). 20 indexed citations

16.

Binkowski, T.A., A. Joachimiak, & Jie Liang. (2005). Protein surface analysis for function annotation in high‐throughput structural genomics pipeline. Protein Science. 14(12). 2972–2981. 57 indexed citations

17.

Binkowski, T.A., Paul Freeman, & Jie Liang. (2004). pvSOAR: detecting similar surface patterns of pocket and void surfaces of amino acid residues on proteins. Nucleic Acids Research. 32(Web Server). W555–W558. 48 indexed citations

18.

Binkowski, T.A.. (2003). CASTp: Computed Atlas of Surface Topography of proteins. Nucleic Acids Research. 31(13). 3352–3355. 1402 indexed citations breakdown →

19.

Adamian, Larisa, Ronald Jackups, T.A. Binkowski, & Jie Liang. (2003). Higher-order Interhelical Spatial Interactions in Membrane Proteins. Journal of Molecular Biology. 327(1). 251–272. 37 indexed citations

20.

Binkowski, T.A., Larisa Adamian, & Jie Liang. (2003). Inferring Functional Relationships of Proteins from Local Sequence and Spatial Surface Patterns. Journal of Molecular Biology. 332(2). 505–526. 114 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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