Stuart S. Levine

26.7k total citations · 12 hit papers
103 papers, 18.1k citations indexed

About

Stuart S. Levine is a scholar working on Molecular Biology, Epidemiology and Infectious Diseases. According to data from OpenAlex, Stuart S. Levine has authored 103 papers receiving a total of 18.1k indexed citations (citations by other indexed papers that have themselves been cited), including 47 papers in Molecular Biology, 27 papers in Epidemiology and 11 papers in Infectious Diseases. Recurrent topics in Stuart S. Levine's work include Respiratory viral infections research (16 papers), Genomics and Chromatin Dynamics (14 papers) and Bacteriophages and microbial interactions (10 papers). Stuart S. Levine is often cited by papers focused on Respiratory viral infections research (16 papers), Genomics and Chromatin Dynamics (14 papers) and Bacteriophages and microbial interactions (10 papers). Stuart S. Levine collaborates with scholars based in United States, Canada and China. Stuart S. Levine's co-authors include Richard A. Young, Rudolf Jaenisch, Laurie A. Boyer, Matthew G. Guenther, Tong Ihn Lee, David K. Gifford, Megan F. Cole, Sarah E. Johnstone, Jacob Zucker and Heather L. Murray and has published in prestigious journals such as Nature, Science and New England Journal of Medicine.

In The Last Decade

Stuart S. Levine

103 papers receiving 17.8k citations

Hit Papers

Core Transcriptional Regulatory Circuitry in Human Embryo... 2004 2026 2011 2018 2005 2006 2007 2010 2008 1000 2.0k 3.0k
What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

  1. Core Transcriptional Regulatory Circuitry in Human Embryonic Stem Cells
    2005 3.4k citations Laurie A. Boyer, Stuart S. Levine et al. profile →
  2. Polycomb complexes repress developmental regulators in murine embryonic stem cells
    2006 2.0k citations Laurie A. Boyer, Stuart S. Levine et al. Nature profile →
  3. A Chromatin Landmark and Transcription Initiation at Most Promoters in Human Cells
    2007 1.5k citations Stuart S. Levine, Laurie A. Boyer et al. profile →
  4. Mediator and cohesin connect gene expression and chromatin architecture
    2010 1.4k citations Michael H. Kagey, Jamie J. Newman et al. Nature profile →
  5. Connecting microRNA Genes to the Core Transcriptional Regulatory Circuitry of Embryonic Stem Cells
    2008 1.1k citations Stuart S. Levine, Jamie J. Newman et al. profile →
  6. Genome-wide Map of Nucleosome Acetylation and Methylation in Yeast
    2005 1.1k citations Stuart S. Levine, Richard A. Young et al. profile →
  7. Divergent Transcription from Active Promoters
    2008 696 citations J. Mauro Calabrese, Stuart S. Levine et al. Science profile →
  8. Foxp3 occupancy and regulation of key target genes during T-cell stimulation
    2007 580 citations Stuart S. Levine, Richard A. Young et al. Nature profile →
  9. Menin Associates with a Trithorax Family Histone Methyltransferase Complex and with the Hoxc8 Locus
    2004 504 citations Stuart S. Levine et al. profile →
  10. Dynamic and Coordinated Epigenetic Regulation of Developmental Transitions in the Cardiac Lineage
    2012 462 citations Stuart S. Levine, Laurie A. Boyer et al. profile →
  11. Single-cell transcriptomic profiling of the aging mouse brain
    2019 439 citations Methodios Ximerakis, Scott Lipnick et al. Nature Neuroscience profile →
  12. Arsenic Exposure Perturbs the Gut Microbiome and Its Metabolic Profile in Mice: An Integrated Metagenomics and Metabolomics Analysis
    2014 425 citations Stuart S. Levine et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Stuart S. Levine United States 43 14.0k 2.2k 1.8k 1.6k 1.2k 103 18.1k
Norma Neff United States 48 9.1k 0.6× 1.9k 0.9× 1.5k 0.8× 825 0.5× 1.6k 1.4× 92 13.4k
Mary‐Ellen Harper Canada 67 8.7k 0.6× 1.2k 0.6× 1.6k 0.9× 2.8k 1.8× 1.8k 1.5× 243 18.6k
Benjamin A. García United States 78 16.0k 1.1× 2.1k 1.0× 1.5k 0.8× 1.2k 0.7× 1.1k 0.9× 333 20.3k
Stephen F. Kingsmore United States 54 9.2k 0.7× 1.6k 0.7× 3.3k 1.8× 1.4k 0.9× 1.5k 1.2× 193 14.9k
Philip Thomas United States 71 8.6k 0.6× 1.7k 0.8× 1.5k 0.9× 763 0.5× 545 0.5× 227 16.5k
Takashi Yamamoto Japan 72 10.9k 0.8× 1.4k 0.6× 3.1k 1.7× 1.7k 1.1× 2.0k 1.7× 689 21.2k
Martin J. Aryee United States 50 14.7k 1.0× 1.7k 0.8× 3.5k 1.9× 642 0.4× 1.1k 0.9× 92 17.9k
Michael Carey United States 74 12.3k 0.9× 1.2k 0.5× 2.9k 1.6× 606 0.4× 1.3k 1.1× 238 18.9k
David M. Wilson United States 69 10.4k 0.7× 1.5k 0.7× 1.4k 0.8× 764 0.5× 523 0.4× 373 16.8k
István Boldogh United States 78 10.4k 0.7× 1.8k 0.8× 830 0.5× 2.3k 1.5× 2.4k 2.0× 304 17.7k

Countries citing papers authored by Stuart S. Levine

Since Specialization
Citations

This map shows the geographic impact of Stuart S. Levine's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Stuart S. Levine with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Stuart S. Levine more than expected).

Fields of papers citing papers by Stuart S. Levine

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Stuart S. Levine. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Stuart S. Levine. The network helps show where Stuart S. Levine may publish in the future.

Co-authorship network of co-authors of Stuart S. Levine

This figure shows the co-authorship network connecting the top 25 collaborators of Stuart S. Levine. A scholar is included among the top collaborators of Stuart S. Levine based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Stuart S. Levine. Stuart S. Levine is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Creason, Allison, Stuart S. Levine, Michael S. Noble, et al.. (2025). Balancing ethical data sharing and open science for reproducible research in biomedical data science. Cell Reports Medicine. 6(4). 102080–102080. 1 indexed citations
2.
Lauffenburger, Douglas A., et al.. (2025). A practical guide to FAIR data management in the age of multi-OMICS and AI. Frontiers in Immunology. 15. 1439434–1439434. 1 indexed citations
3.
Davis, Nick, Yok Hian Chionh, Megan E. McBee, et al.. (2024). Facile metabolic reprogramming distinguishes mycobacterial adaptation to hypoxia and starvation: ketosis drives starvation-induced persistence in M. bovis BCG. Communications Biology. 7(1). 866–866. 2 indexed citations
4.
Wuest, Alexandra, Alvin Hsu, Varun Narendra, et al.. (2024). High-throughput evaluation of genetic variants with prime editing sensor libraries. Nature Biotechnology. 43(10). 1648–1662. 27 indexed citations
5.
Stortchevoi, Alexei & Stuart S. Levine. (2024). Improved Yield of SPRI Beads–Based Size Selection in theVery High Molecular Weight Range. Journal of Biomolecular Techniques JBT. 35(1). 3fc1f5fe.d13e7666–3fc1f5fe.d13e7666. 1 indexed citations
6.
Green, Stefan J., Tamás Török, Jonathan Allen, et al.. (2023). Metagenomic Methods for Addressing NASA's Planetary Protection Policy Requirements on Future Missions: A Workshop Report. Astrobiology. 23(8). 897–907. 2 indexed citations
7.
Moiso, Enrico, Alexander Farahani, Hetal D. Marble, et al.. (2022). Developmental Deconvolution for Classification of Cancer Origin. Cancer Discovery. 12(11). 2566–2585. 12 indexed citations
8.
Gabriely, Galina, Duanduan Ma, Shafiuddin Siddiqui, et al.. (2021). Myeloid cell subsets that express latency-associated peptide promote cancer growth by modulating T cells. iScience. 24(11). 103347–103347. 5 indexed citations
9.
Trapečar, Martin, Emile Wogram, Devon S. Svoboda, et al.. (2021). Human physiomimetic model integrating microphysiological systems of the gut, liver, and brain for studies of neurodegenerative diseases. Science Advances. 7(5). 122 indexed citations
10.
Fletcher, Marissa, Erik J. Tillman, Vincent L. Butty, Stuart S. Levine, & Dennis H. Kim. (2019). Global transcriptional regulation of innate immunity by ATF-7 in C. elegans. PLoS Genetics. 15(2). e1007830–e1007830. 43 indexed citations
11.
Ximerakis, Methodios, Scott Lipnick, Brendan T. Innes, et al.. (2019). Single-cell transcriptomic profiling of the aging mouse brain. Nature Neuroscience. 22(10). 1696–1708. 439 indexed citations breakdown →
12.
Zhang, Shuping, Jacob C. Ulirsch, Jason Velazquez, et al.. (2019). HRI coordinates translation necessary for protein homeostasis and mitochondrial function in erythropoiesis. eLife. 8. 47 indexed citations
13.
Ben-Yair, Raz, Vincent L. Butty, Michele Busby, et al.. (2019). H3K27me3-mediated silencing of structural genes is required for zebrafish heart regeneration. Development. 146(19). 34 indexed citations
14.
Gural, Nil, Liliana Mâncio-Silva, A. B. Miller, et al.. (2018). In Vitro Culture, Drug Sensitivity, and Transcriptome of Plasmodium Vivax Hypnozoites. Cell Host & Microbe. 23(3). 395–406.e4. 97 indexed citations
15.
Delfini, Marie-Claire, et al.. (2017). The Hox proteins Ubx and AbdA collaborate with the transcription pausing factor M1 BP to regulate gene transcription. The EMBO Journal. 36(19). 2887–2906. 23 indexed citations
16.
Bunch, Heeyoun, Brian Lawney, Adam Burkholder, et al.. (2016). RNA polymerase II promoter-proximal pausing in mammalian long non-coding genes. Genomics. 108(2). 64–77. 40 indexed citations
17.
Bunch, Heeyoun, Xiaofeng Zheng, Adam Burkholder, et al.. (2014). TRIM28 regulates RNA polymerase II promoter-proximal pausing and pause release. Nature Structural & Molecular Biology. 21(10). 876–883. 109 indexed citations
18.
Kagey, Michael H., Jamie J. Newman, Steve Bilodeau, et al.. (2010). Mediator and cohesin connect gene expression and chromatin architecture. Nature. 467(7314). 430–435. 1430 indexed citations breakdown →
19.
Calabrese, J. Mauro, Stuart S. Levine, G Yeo, et al.. (2008). Divergent Transcription from Active Promoters. Science. 322(5909). 1849–1851. 696 indexed citations breakdown →
20.
Levine, Stuart S., et al.. (1982). Complement levels in the squirrel monkey (Saimiri sciureus).. PubMed. 32(4). 371–2. 3 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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