Stuart Moodie

2.5k total citations
25 papers, 666 citations indexed

About

Stuart Moodie is a scholar working on Molecular Biology, Information Systems and Management and Oncology. According to data from OpenAlex, Stuart Moodie has authored 25 papers receiving a total of 666 indexed citations (citations by other indexed papers that have themselves been cited), including 22 papers in Molecular Biology, 4 papers in Information Systems and Management and 2 papers in Oncology. Recurrent topics in Stuart Moodie's work include Bioinformatics and Genomic Networks (13 papers), Gene Regulatory Network Analysis (10 papers) and Microbial Metabolic Engineering and Bioproduction (10 papers). Stuart Moodie is often cited by papers focused on Bioinformatics and Genomic Networks (13 papers), Gene Regulatory Network Analysis (10 papers) and Microbial Metabolic Engineering and Bioproduction (10 papers). Stuart Moodie collaborates with scholars based in United Kingdom, United States and Germany. Stuart Moodie's co-authors include Janet M. Thornton, John B. O. Mitchell, Anatoly Sorokin, Nicolas Le Novère, Emek Demir, Huaiyu Mi, Igor Goryanin, Dana Faratian, David J. Harrison and Alice Villéger and has published in prestigious journals such as Nucleic Acids Research, Bioinformatics and Journal of Molecular Biology.

In The Last Decade

Stuart Moodie

25 papers receiving 657 citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Stuart Moodie United Kingdom 13 562 91 63 61 52 25 666
Charlotta Schärfe Germany 10 1.0k 1.8× 109 1.2× 129 2.0× 46 0.8× 57 1.1× 15 1.3k
Vijayalakshmi Chelliah United Kingdom 17 1.2k 2.1× 227 2.5× 135 2.1× 61 1.0× 66 1.3× 22 1.5k
Natalja Kurbatova United Kingdom 7 530 0.9× 90 1.0× 24 0.4× 33 0.5× 18 0.3× 11 679
Sylvain Foisy Canada 11 759 1.4× 26 0.3× 54 0.9× 71 1.2× 45 0.9× 18 1.2k
Spencer Bliven United States 13 698 1.2× 91 1.0× 221 3.5× 60 1.0× 30 0.6× 22 833
Caterina Barillari United Kingdom 11 525 0.9× 193 2.1× 91 1.4× 52 0.9× 31 0.6× 16 698
Robert Petryszak United Kingdom 9 973 1.7× 136 1.5× 18 0.3× 76 1.2× 30 0.6× 11 1.3k
Yimeng Dou United States 8 718 1.3× 93 1.0× 39 0.6× 56 0.9× 16 0.3× 20 998
Ammar Ammar Netherlands 7 357 0.6× 60 0.7× 16 0.3× 52 0.9× 26 0.5× 19 621
Susanna Repo Finland 10 345 0.6× 26 0.3× 33 0.5× 64 1.0× 15 0.3× 14 567

Countries citing papers authored by Stuart Moodie

Since Specialization
Citations

This map shows the geographic impact of Stuart Moodie's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Stuart Moodie with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Stuart Moodie more than expected).

Fields of papers citing papers by Stuart Moodie

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Stuart Moodie. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Stuart Moodie. The network helps show where Stuart Moodie may publish in the future.

Co-authorship network of co-authors of Stuart Moodie

This figure shows the co-authorship network connecting the top 25 collaborators of Stuart Moodie. A scholar is included among the top collaborators of Stuart Moodie based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Stuart Moodie. Stuart Moodie is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Smith, Lucian P., Stuart Moodie, Frank Bergmann, et al.. (2020). Systems Biology Markup Language (SBML) Level 3 Package: Distributions, Version 1, Release 1. Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics. 17(2-3). 5 indexed citations
2.
Touré, Vasundra, Stuart Moodie, Irina Balaur, et al.. (2019). Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0. Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics. 16(2). 38 indexed citations
3.
Larizza, Cristiana, et al.. (2018). Complex Bayesian Modeling Workflows Encoding and Execution Made Easy With a Novel WinBUGS Plugin of the Drug Disease Model Resources Interoperability Framework. CPT Pharmacometrics & Systems Pharmacology. 7(5). 298–308. 1 indexed citations
4.
Wilkins, Justin, P Chan, Michael K. Smith, et al.. (2017). Thoughtflow: Standards and Tools for Provenance Capture and Workflow Definition to Support Model‐Informed Drug Discovery and Development. CPT Pharmacometrics & Systems Pharmacology. 6(5). 285–292. 6 indexed citations
5.
Moodie, Stuart, Nicolas Le Novère, Emek Demir, Huaiyu Mi, & Alice Villéger. (2015). Systems Biology Graphical Notation: Process Description language Level 1 Version 1.3. Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics. 12(2). 213–280. 12 indexed citations
6.
Mi, Huaiyu, Falk Schreiber, Stuart Moodie, et al.. (2015). Systems Biology Graphical Notation: Activity Flow language Level 1 Version 1.2. PubMed. 12(2). 265–265. 19 indexed citations
7.
Mi, Huaiyu, Falk Schreiber, Stuart Moodie, et al.. (2015). Systems Biology Graphical Notation: Activity Flow language Level 1 Version 1.2. Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics. 12(2). 340–381. 25 indexed citations
8.
Sorokin, Anatoly, Nicolas Le Novère, Augustin Luna, et al.. (2015). Systems Biology Graphical Notation: Entity Relationship language Level 1 Version 2. Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics. 12(2). 281–339. 13 indexed citations
9.
Kokash, Natallia, Stuart Moodie, Michael K. Smith, & Nicholas H. G. Holford. (2015). Implementing a Domain-specific Language for Model-based Drug Development. Procedia Computer Science. 63. 308–316. 4 indexed citations
10.
Moodie, Stuart, Nicolas Le Novère, Emek Demir, Huaiyu Mi, & Alice Villéger. (2015). Systems Biology Graphical Notation: Process Description language Level 1 Version 1.3. PubMed. 12(2). 263–263. 19 indexed citations
11.
Bergmann, Frank, Richard R. Adams, Stuart Moodie, et al.. (2014). COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project. BMC Bioinformatics. 15(1). 369–369. 91 indexed citations
12.
Bergmann, Frank, Stuart Moodie, Jonathan Cooper, et al.. (2014). COMBINE archive: One File To Share Them All.. 1 indexed citations
13.
Iersel, Martijn van, Tobias Czauderna, Sarah Boyd, et al.. (2012). Software support for SBGN maps: SBGN-ML and LibSBGN. Bioinformatics. 28(15). 2016–2021. 44 indexed citations
14.
Novère, Nicolas Le, Michael Hucka, Nadia Anwar, et al.. (2011). Meeting report from the first meetings of the Computational Modeling in Biology Network (COMBINE). Standards in Genomic Sciences. 5(2). 230–242. 4 indexed citations
15.
Faratian, Dana, Alexey Goltsov, Anatoly Sorokin, et al.. (2009). Systems Biology Reveals New Strategies for Personalizing Cancer Medicine and Confirms the Role of PTEN in Resistance to Trastuzumab. Cancer Research. 69(16). 6713–6720. 126 indexed citations
16.
Grimes, Graeme R., et al.. (2006). PDQ Wizard: automated prioritization and characterization of gene and protein lists using biomedical literature. Bioinformatics. 22(16). 2055–2057. 15 indexed citations
17.
Grimes, Graeme R., Stuart Moodie, Marie Craigon, et al.. (2005). GPX-Macrophage Expression Atlas: A database for expression profiles of macrophages challenged with a variety of pro-inflammatory, anti-inflammatory, benign and pathogen insults. BMC Genomics. 6(1). 178–178. 12 indexed citations
18.
Henrick, Kim, et al.. (1998). Deposition of Macromolecular Structures. Acta Crystallographica Section D Biological Crystallography. 54(6). 1105–1108. 11 indexed citations
19.
Moodie, Stuart, John B. O. Mitchell, & Janet M. Thornton. (1996). Protein Recognition of Adenylate: An Example of a Fuzzy Recognition Template. Journal of Molecular Biology. 263(3). 486–500. 108 indexed citations
20.
Moodie, Stuart & Janet M. Thornton. (1993). A study into the effects of protein binding on nucleotide conformation. Nucleic Acids Research. 21(6). 1369–1380. 59 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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