Siyuan Chen

492 total citations · 1 hit paper
11 papers, 235 citations indexed

About

Siyuan Chen is a scholar working on Molecular Biology, Genetics and Astronomy and Astrophysics. According to data from OpenAlex, Siyuan Chen has authored 11 papers receiving a total of 235 indexed citations (citations by other indexed papers that have themselves been cited), including 6 papers in Molecular Biology, 2 papers in Genetics and 1 paper in Astronomy and Astrophysics. Recurrent topics in Siyuan Chen's work include Single-cell and spatial transcriptomics (3 papers), Gene expression and cancer classification (2 papers) and Cell Image Analysis Techniques (1 paper). Siyuan Chen is often cited by papers focused on Single-cell and spatial transcriptomics (3 papers), Gene expression and cancer classification (2 papers) and Cell Image Analysis Techniques (1 paper). Siyuan Chen collaborates with scholars based in Saudi Arabia, China and Hong Kong. Siyuan Chen's co-authors include Xin Gao, Haoyang Li, Juexiao Zhou, Bin Zhang, Zhongxiao Li, Yu Wang, Xingyu Liao, Shiwei Sun, Ruochi Zhang and Yu Li and has published in prestigious journals such as Nature Communications, Bioinformatics and Biochemical and Biophysical Research Communications.

In The Last Decade

Siyuan Chen

9 papers receiving 233 citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics

2023 115 citations Haoyang Li, Juexiao Zhou et al. Nature Communications profile →

Peers

Countries citing papers authored by Siyuan Chen

Since Specialization

Citations

This map shows the geographic impact of Siyuan Chen's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Siyuan Chen with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Siyuan Chen more than expected).

Fields of papers citing papers by Siyuan Chen

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Siyuan Chen. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Siyuan Chen. The network helps show where Siyuan Chen may publish in the future.

Co-authorship network of co-authors of Siyuan Chen

This figure shows the co-authorship network connecting the top 25 collaborators of Siyuan Chen. A scholar is included among the top collaborators of Siyuan Chen based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Siyuan Chen. Siyuan Chen is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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11 of 11 papers shown

#	Work	Indexed citations
1	Large language models in biomedicine and healthcare 2025 ·Juexiao Zhou, Haoyang Li, Siyuan Chen, Zhi Xiong Chen, Zhongyi Han, Xin Gao	0
2	KaryoXpert: An accurate chromosome segmentation and classification framework for karyotyping analysis without training with manually labeled metaphase-image mask annotations 2024 ·Computers in Biology and Medicine ·Siyuan Chen, Kaichuang Zhang, (unknown), (unknown), (unknown), Haoyang Li, Juexiao Zhou, Chao Huang, Yongguo Yu, Xin Gao	6
3	ProNet DB: a proteome-wise database for protein surface property representations and RNA-binding profiles 2024 ·Database ·(unknown), Jin Xiao, Siyuan Chen, Licheng Zong, Xin Gao, Yu Li	0
4	An AI Agent for Fully Automated Multi‐Omic Analyses 2024 ·Advanced Science ·Juexiao Zhou, Bin Zhang, Guowei Li, (unknown), Haoyang Li, Xiaopeng Xu, Siyuan Chen, Wenjia He, (unknown), Liwei Liu, (unknown)	21
5	PPML-Omics: A privacy-preserving federated machine learning method protects patients’ privacy in omic data 2024 ·Science Advances ·Juexiao Zhou, Siyuan Chen, Yulian Wu, Haoyang Li, Bin Zhang, Longxi Zhou, Yan Hu, (unknown), Zhongxiao Li, (unknown), Wenkai Han, (unknown), Di Wang, Xin Gao	20
6	Single-nucleus transcriptome analysis identifies a novel FKBP5+ endothelial cell subtype involved in endothelial-to-mesenchymal transition in adipose tissue during aging 2024 ·Biochemical and Biophysical Research Communications ·Siyuan Chen, (unknown), Pingjin Gao, (unknown)	2
7	LakeBench: A Benchmark for Discovering Joinable and Unionable Tables in Data Lakes 2024 ·Proceedings of the VLDB Endowment ·(unknown), (unknown), Lei Cao, (unknown), Siyuan Chen, (unknown), (unknown), (unknown), Jiajun Li, (unknown), (unknown), Chi Zhang, Yuqing Jiang, (unknown), Yu‐Ping Wang, Ye Yuan, Guoren Wang, Nan Tang	6
8	A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics breakdown → 2023 ·Nature Communications ·Haoyang Li, Juexiao Zhou, Zhongxiao Li, Siyuan Chen, Xingyu Liao, Bin Zhang, Ruochi Zhang, Yu Wang, Shiwei Sun, Xin Gao	115
9	Deep learning identifies and quantifies recombination hotspot determinants 2022 ·Bioinformatics ·Yu Li, Siyuan Chen, (unknown), Hiroyuki Kuwahara, Kevin Y. Yip, Xin Gao	5
10	Self-supervised contrastive learning for integrative single cell RNA-seq data analysis 2022 ·Briefings in Bioinformatics ·Wenkai Han, Yuqi Cheng, Jiayang Chen, (unknown), Zhihang Hu, Siyuan Chen, Licheng Zong, Hong Liang, Ting‐Fung Chan, Irwin King, Xin Gao, Yu Li	49
11	Lunar features detection for energy discovery via deep learning 2021 ·Applied Energy ·Siyuan Chen, Yu Li, Tao Zhang, Xingyu Zhu, Shuyu Sun, Xin Gao	11

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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