Siobain Duffy

7.6k total citations · 1 hit paper
78 papers, 4.2k citations indexed

About

Siobain Duffy is a scholar working on Plant Science, Ecology and Genetics. According to data from OpenAlex, Siobain Duffy has authored 78 papers receiving a total of 4.2k indexed citations (citations by other indexed papers that have themselves been cited), including 46 papers in Plant Science, 21 papers in Ecology and 17 papers in Genetics. Recurrent topics in Siobain Duffy's work include Plant Virus Research Studies (46 papers), Bacteriophages and microbial interactions (21 papers) and Evolution and Genetic Dynamics (15 papers). Siobain Duffy is often cited by papers focused on Plant Virus Research Studies (46 papers), Bacteriophages and microbial interactions (21 papers) and Evolution and Genetic Dynamics (15 papers). Siobain Duffy collaborates with scholars based in United States, Tanzania and United Kingdom. Siobain Duffy's co-authors include Edward C. Holmes, Laura A. Shackelton, Mya Breitbart, Karyna Rosario, Donald W. Schaffner, Paul E. Turner, Christina L. Burch, Michael Charleston, Beth Shapiro and Cadhla Firth and has published in prestigious journals such as Science, SHILAP Revista de lepidopterología and PLoS ONE.

In The Last Decade

Siobain Duffy

74 papers receiving 4.1k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Rates of evolutionary change in viruses: patterns and determinants

2008 1.1k citations Siobain Duffy et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Siobain Duffy United States	31	2.2k	1.0k	930	830	828	78	4.2k
Pierre Lefeuvre France	33	3.5k 1.6×	444 0.4×	538 0.6×	447 0.5×	716 0.9×	117	4.8k
Brejnev Muhire United States	16	2.9k 1.3×	329 0.3×	1.1k 1.2×	443 0.5×	535 0.6×	24	4.5k
Rafael Sanjuán Spain	39	2.0k 0.9×	1.1k 1.1×	605 0.7×	2.8k 3.4×	2.5k 3.0×	146	7.0k
M. J. Adams United Kingdom	21	1.4k 0.6×	268 0.3×	726 0.8×	386 0.5×	439 0.5×	52	3.2k
Michael Golden South Africa	11	1.6k 0.8×	216 0.2×	792 0.9×	364 0.4×	420 0.5×	17	3.0k
J. Scott Armstrong United States	28	1.4k 0.7×	273 0.3×	645 0.7×	417 0.5×	1.1k 1.4×	125	3.6k
Mark J. Gibbs Australia	24	1.8k 0.8×	306 0.3×	348 0.4×	356 0.4×	658 0.8×	46	3.0k
Hélène Sanfaçon Canada	29	2.6k 1.2×	282 0.3×	377 0.4×	265 0.3×	1.0k 1.3×	79	3.6k
M. A. Mayo United Kingdom	32	2.6k 1.2×	385 0.4×	371 0.4×	200 0.2×	762 0.9×	96	3.6k
Paul E. Turner United States	37	1.5k 0.7×	3.1k 3.0×	237 0.3×	2.4k 2.9×	1.7k 2.0×	126	6.2k

Countries citing papers authored by Siobain Duffy

Since Specialization

Citations

This map shows the geographic impact of Siobain Duffy's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Siobain Duffy with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Siobain Duffy more than expected).

Fields of papers citing papers by Siobain Duffy

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Siobain Duffy. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Siobain Duffy. The network helps show where Siobain Duffy may publish in the future.

Co-authorship network of co-authors of Siobain Duffy

This figure shows the co-authorship network connecting the top 25 collaborators of Siobain Duffy. A scholar is included among the top collaborators of Siobain Duffy based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Siobain Duffy. Siobain Duffy is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Grieve, Bruce, Siobain Duffy, José Trinidad Ascencio‐Ibáñez, et al.. (2024). Early Detection of Plant Virus Infection Using Multispectral Imaging and Machine Learning. 1 indexed citations

Hoyer, J. Steen, et al.. (2024). Phylogeographic analysis of Begomovirus coat and replication-associated proteins. Journal of General Virology. 105(10).

Chikoti, Patrick Chiza, et al.. (2024). First report of the severe Uganda variant of East African cassava mosaic virus in Zambia. New Disease Reports. 49(1). 1 indexed citations

Mukasa, Settumba B., Mildred Ochwo‐Ssemakula, Peter Sseruwagi, et al.. (2024). Cassava brown streak virus evolves with a nucleotide-substitution rate that is typical for the family Potyviridae. Virus Research. 346. 199397–199397.

Hoyer, J. Steen, et al.. (2023). A Transducing Bacteriophage Infecting Staphylococcus epidermidis Contributes to the Expansion of a Novel Siphovirus Genus and Implies the Genus Is Inappropriate for Phage Therapy. mSphere. 8(3). e0052422–e0052422. 2 indexed citations

Duffy, Siobain, et al.. (2023). The how of counter-defense: viral evolution to combat host immunity. Current Opinion in Microbiology. 74. 102320–102320. 8 indexed citations

Hoyer, J. Steen, et al.. (2022). Rapid Multilocus Adaptation of Clonal Cabbage Leaf Curl Virus Populations to Arabidopsis thaliana. Phytobiomes Journal. 6(3). 227–235. 2 indexed citations

Hoyer, J. Steen, et al.. (2022). Limited role of recombination in the global diversification of begomovirus DNA-B proteins. Virus Research. 323. 198959–198959. 2 indexed citations

Hoyer, J. Steen, Alana L. Jacobson, George G. Kennedy, et al.. (2021). Population diversity of cassava mosaic begomoviruses increases over the course of serial vegetative propagation. Journal of General Virology. 102(7). 20 indexed citations

10.

Hoyer, J. Steen, et al.. (2021). An experimental strategy for preparing circular ssDNA virus genomes for next-generation sequencing. Journal of Virological Methods. 300. 114405–114405. 16 indexed citations

11.

Zhao, Lele, et al.. (2021). Truly ubiquitous CRESS DNA viruses scattered across the eukaryotic tree of life. Journal of Evolutionary Biology. 34(12). 1901–1916. 10 indexed citations

12.

Hoyer, J. Steen, et al.. (2021). Interspecies Recombination Has Driven the Macroevolution of Cassava Mosaic Begomoviruses. Journal of Virology. 95(17). e0054121–e0054121. 31 indexed citations

13.

Zhao, Lele, et al.. (2018). Existing Host Range Mutations Constrain Further Emergence of RNA Viruses. Journal of Virology. 93(4). 12 indexed citations

14.

Dennehy, John J., Siobain Duffy, Kara J. O’Keefe, Scott V. Edwards, & Paul E. Turner. (2013). Frequent Coinfection Reduces RNA Virus Population Genetic Diversity. Journal of Heredity. 104(5). 704–712. 11 indexed citations

15.

Almeida, Rodrigo P. P., et al.. (2012). A divergent variant of Grapevine leafroll-associated virus 3is present in California. Virology Journal. 9(1). 235–235. 17 indexed citations

16.

Duffy, Siobain. (2003). Rosalind Franklin: the Dark Lady of DNA. The Yale Journal of Biology and Medicine. 76(3). 142–143. 1 indexed citations

17.

Schaffner, Donald W., et al.. (2003). Monte Carlo simulation of the shelf life of pasteurized milk as affected by temperature and initial concentration of spoilage organisms. Food Protection Trends. 16 indexed citations

18.

Duffy, Siobain. (2003). How to Write and Illustrate a Scientific Paper. The Yale Journal of Biology and Medicine. 76(3). 140–141. 2 indexed citations

19.

Duffy, Siobain & Donald W. Schaffner. (2001). Modeling the Survival of Escherichia coli O157:H7 in Apple Cider Using Probability Distribution Functions for Quantitative Risk Assessment. Journal of Food Protection. 64(5). 599–605. 14 indexed citations

20.

Duffy, Siobain, John J. Churey, Randy W. Worobo, & Donald W. Schaffner. (2000). Analysis and Modeling of the Variability Associated with UV Inactivation of Escherichia coli in Apple Cider. Journal of Food Protection. 63(11). 1587–1590. 52 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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