Shea N. Gardner

3.9k total citations · 1 hit paper
59 papers, 2.6k citations indexed

About

Shea N. Gardner is a scholar working on Molecular Biology, Ecology and Infectious Diseases. According to data from OpenAlex, Shea N. Gardner has authored 59 papers receiving a total of 2.6k indexed citations (citations by other indexed papers that have themselves been cited), including 32 papers in Molecular Biology, 16 papers in Ecology and 13 papers in Infectious Diseases. Recurrent topics in Shea N. Gardner's work include Bacteriophages and microbial interactions (13 papers), Genomics and Phylogenetic Studies (12 papers) and Viral gastroenteritis research and epidemiology (10 papers). Shea N. Gardner is often cited by papers focused on Bacteriophages and microbial interactions (13 papers), Genomics and Phylogenetic Studies (12 papers) and Viral gastroenteritis research and epidemiology (10 papers). Shea N. Gardner collaborates with scholars based in United States, United Kingdom and Sweden. Shea N. Gardner's co-authors include Tom Slezak, Barry G. Hall, Crystal Jaing, Kevin McLoughlin, Marc Mangel, Elizabeth Vitalis, Marc Mangel, Jonathan Allen, John L. Maron and Morris S. Jones and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Nucleic Acids Research and Bioinformatics.

In The Last Decade

Shea N. Gardner

59 papers receiving 2.5k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

kSNP3.0: SNP detection and phylogenetic analysis of genomes without genome alignment or reference genome

2015 464 citations Shea N. Gardner, Tom Slezak et al. Bioinformatics profile →

Peers

Shea N. Gardner

MB

ID

ECOLO

PS

EPIDE

Ana I. Vela Spain

Alistair C. Darby United Kingdom

Scott A. Handley United States

Dana Willner Australia

Weihong Qi Switzerland

Appolinaire Djikeng Kenya

Kimberly A. Bishop‐Lilly United States

Christina Schrader Germany

Lucy van Dorp United Kingdom

Ji Hyung Kim South Korea

Ana I. Vela Spain

Shea N. Gardner

775 ×0.7

MB

541 ×1.0

ID

536 ×1.0

ECOLO

247 ×0.6

PS

430 ×1.2

EPIDE

Citations per year, relative to Shea N. Gardner Shea N. Gardner (= 1×) peers Ana I. Vela

Countries citing papers authored by Shea N. Gardner

Since Specialization

Citations

This map shows the geographic impact of Shea N. Gardner's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Shea N. Gardner with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Shea N. Gardner more than expected).

Fields of papers citing papers by Shea N. Gardner

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Shea N. Gardner. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Shea N. Gardner. The network helps show where Shea N. Gardner may publish in the future.

Co-authorship network of co-authors of Shea N. Gardner

This figure shows the co-authorship network connecting the top 25 collaborators of Shea N. Gardner. A scholar is included among the top collaborators of Shea N. Gardner based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Shea N. Gardner. Shea N. Gardner is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

1.

Jaing, Crystal, James B. Thissen, Shea N. Gardner, et al.. (2016). Differential expression of viral agents in lymphoma tissues of patients with ABC diffuse large B-cell lymphoma from high and low endemic infectious disease regions. Oncology Letters. 12(4). 2782–2788. 6 indexed citations

2.

Ames, Sasha, Shea N. Gardner, Jose Manuel Martí, et al.. (2015). Using populations of human and microbial genomes for organism detection in metagenomes. Genome Research. 25(7). 1056–1067. 25 indexed citations

3.

Gardner, Shea N., Tom Slezak, & Barry G. Hall. (2015). kSNP3.0: SNP detection and phylogenetic analysis of genomes without genome alignment or reference genome. Bioinformatics. 31(17). 2877–2878. 464 indexed citations breakdown →

4.

Thissen, James B., Kevin McLoughlin, Shea N. Gardner, et al.. (2014). Analysis of sensitivity and rapid hybridization of a multiplexed Microbial Detection Microarray. Journal of Virological Methods. 201. 73–78. 24 indexed citations

5.

Rosenstierne, Maiken Worsøe, Kevin McLoughlin, Majken Lindholm, et al.. (2014). The Microbial Detection Array for Detection of Emerging Viruses in Clinical Samples - A Useful Panmicrobial Diagnostic Tool. PLoS ONE. 9(6). e100813–e100813. 24 indexed citations

6.

Be, Nicholas A., James B. Thissen, Shea N. Gardner, et al.. (2013). Detection of Bacillus anthracis DNA in Complex Soil and Air Samples Using Next-Generation Sequencing. PLoS ONE. 8(9). e73455–e73455. 23 indexed citations

7.

Hysom, David, et al.. (2012). Skip the Alignment: Degenerate, Multiplex Primer and Probe Design Using K-mer Matching Instead of Alignments. PLoS ONE. 7(4). e34560–e34560. 28 indexed citations

8.

Vitalis, Elizabeth, et al.. (2011). LAVA: An Open-Source Approach To Designing LAMP (Loop-Mediated Isothermal Amplification) DNA Signatures. BMC Bioinformatics. 12(1). 240–240. 61 indexed citations

9.

Victoria, Joseph, Chunlin Wang, Morris S. Jones, et al.. (2010). Viral Nucleic Acids in Live-Attenuated Vaccines: Detection of Minority Variants and an Adventitious Virus. Journal of Virology. 84(12). 6033–6040. 249 indexed citations

10.

Gardner, Shea N., Crystal Jaing, Kevin McLoughlin, & Tom Slezak. (2010). A microbial detection array (MDA) for viral and bacterial detection. BMC Genomics. 11(1). 668–668. 89 indexed citations

11.

Allen, Jonathan, Shea N. Gardner, Elizabeth Vitalis, & Tom Slezak. (2009). Conserved amino acid markers from past influenza pandemic strains. BMC Microbiology. 9(1). 77–77. 40 indexed citations

12.

Gardner, Shea N., et al.. (2009). Multiplex primer prediction software for divergent targets. Nucleic Acids Research. 37(19). 6291–6304. 13 indexed citations

13.

Lemmon, Gordon & Shea N. Gardner. (2008). Predicting the sensitivity and specificity of published real-time PCR assays. Annals of Clinical Microbiology and Antimicrobials. 7(1). 18–18. 45 indexed citations

14.

Li, Yu, Darin S. Carroll, Shea N. Gardner, et al.. (2007). On the origin of smallpox: Correlating variola phylogenics with historical smallpox records. Proceedings of the National Academy of Sciences. 104(40). 15787–15792. 124 indexed citations

15.

Gardner, Shea N.. (2005). Draft versus finished sequence data for DNA and protein diagnostic signature development. Nucleic Acids Research. 33(18). 5838–5850. 6 indexed citations

16.

Gardner, Shea N. & Mark C. Wagner. (2005). Software for optimization of SNP and PCR-RFLP genotyping to discriminate many genomes with the fewest assays. BMC Genomics. 6(1). 73–73. 8 indexed citations

17.

Gardner, Shea N. & Anurag A. Agrawal. (2002). Induced plant defence and the evolution of counter-defences in herbivores. Evolutionary ecology research. 4(8). 1131–1151. 23 indexed citations

18.

Gardner, Shea N. & Matthew B. Thomas. (2002). Costs and benefits of fighting infection in locusts. Evolutionary ecology research. 4(1). 109–131. 32 indexed citations

19.

Gardner, Shea N.. (2002). Cell Cycle Phase-Specific CHemotherapy: Computation Methods for Guiding Treatment. Cell Cycle. 1(6). 369–374. 25 indexed citations

20.

Gardner, Shea N. & Marc Mangel. (1997). When can A Clonal Organism Escape Senescence?. The American Naturalist. 150(4). 462–490. 50 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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