Rui Borges

1.8k total citations
17 papers, 365 citations indexed

About

Rui Borges is a scholar working on Molecular Biology, Genetics and Cellular and Molecular Neuroscience. According to data from OpenAlex, Rui Borges has authored 17 papers receiving a total of 365 indexed citations (citations by other indexed papers that have themselves been cited), including 11 papers in Molecular Biology, 9 papers in Genetics and 3 papers in Cellular and Molecular Neuroscience. Recurrent topics in Rui Borges's work include Genetic diversity and population structure (8 papers), Genomics and Phylogenetic Studies (7 papers) and Retinal Development and Disorders (3 papers). Rui Borges is often cited by papers focused on Genetic diversity and population structure (8 papers), Genomics and Phylogenetic Studies (7 papers) and Retinal Development and Disorders (3 papers). Rui Borges collaborates with scholars based in Portugal, United Kingdom and United States. Rui Borges's co-authors include Agostinho Antunes, Ana Paula Rocha, João Paulo Machado, Warren E. Johnson, Stephen J. O’Brien, Vı́tor Vasconcelos, Carolin Kosiol, M. Thomas P. Gilbert, Gergely J. Szöllősi and Erich D. Jarvis and has published in prestigious journals such as Bioinformatics, PLoS ONE and Genetics.

In The Last Decade

Rui Borges

16 papers receiving 358 citations

Peers

Countries citing papers authored by Rui Borges

Since Specialization

Citations

This map shows the geographic impact of Rui Borges's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Rui Borges with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Rui Borges more than expected).

Fields of papers citing papers by Rui Borges

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Rui Borges. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Rui Borges. The network helps show where Rui Borges may publish in the future.

Co-authorship network of co-authors of Rui Borges

This figure shows the co-authorship network connecting the top 25 collaborators of Rui Borges. A scholar is included among the top collaborators of Rui Borges based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Rui Borges. Rui Borges is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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17 of 17 papers shown

#	Work	Indexed citations
1	The Patterns of Codon Usage between Chordates and Arthropods are Different but Co-evolving with Mutational Biases 2024 ·Molecular Biology and Evolution ·(unknown), Carolin Kosiol, Rui Borges	4
2	Polymorphism-Aware Models in RevBayes: Species Trees, Disentangling Balancing Selection, and GC-Biased Gene Conversion 2024 ·Molecular Biology and Evolution ·(unknown), Rui Borges, Carolin Kosiol	0
3	Testing phylogenetic signal with categorical traits and tree uncertainty 2023 ·Bioinformatics ·(unknown), Rui Borges, Ana Paula Rocha, Agostinho Antunes	5
4	Bait‐ER: A Bayesian method to detect targets of selection in Evolve‐and‐Resequence experiments 2022 ·Journal of Evolutionary Biology ·(unknown), Rui Borges, Carolin Kosiol	4
5	Polymorphism‐aware estimation of species trees and evolutionary forces from genomic sequences with RevBayes 2022 ·Methods in Ecology and Evolution ·Rui Borges, Bastien Boussau, Sebastian Höhna, Ricardo J. Pereira, Carolin Kosiol	1
6	Lessons learned from organizing and teaching virtual phylogenetics workshops 2022 ·Joëlle Barido‐Sottani, (unknown), Rui Borges, Jeremy M. Brown, (unknown), (unknown), (unknown), Sebastian Höhna, Michael J. Landis, Paul O. Lewis, Michael R. May, Fábio K. Mendes, Walker Pett, Benjamin D. Redelings, Carrie M. Tribble, April Wright, Rosana Zenil‐Ferguson, Tracy A. Heath	1
7	Nucleotide Usage Biases Distort Inferences of the Species Tree 2022 ·Genome Biology and Evolution ·Rui Borges, Bastien Boussau, Gergely J. Szöllősi, Carolin Kosiol	6
8	Stability of SARS-CoV-2 phylogenies 2020 ·PLoS Genetics ·Yatish Turakhia, Nicola De Maio, Bryan Thornlow, Landen Gozashti, Robert Lanfear, Conor R. Walker, Angie S. Hinrichs, Jason D. Fernandes, Rui Borges, Greg Slodkowicz, Lukas Weilguny, David Haussler, Nick Goldman, Russell Corbett‐Detig	55
9	Quantifying GC-Biased Gene Conversion in Great Ape Genomes Using Polymorphism-Aware Models 2019 ·Genetics ·Rui Borges, Gergely J. Szöllősi, Carolin Kosiol	18
10	Benchmarking software tools for detecting and quantifying selection in evolve and resequencing studies 2019 ·Genome biology ·(unknown), (unknown), (unknown), Rui Borges, Andreas Futschik, Robert Kofler, Christian Schlötterer	23
11	The genetic diversity of two invasive sympatric bivalves (Corbicula fluminea and Dreissena polymorpha) from Lakes Garda and Maggiore, Northern Italy 2019 ·Journal of Great Lakes Research ·(unknown), (unknown), Rui Borges, (unknown), (unknown), Lúcia Guilhermino, Vı́tor Vasconcelos, Nicoletta Riccardi, Agostinho Antunes	5
12	Avian Binocularity and Adaptation to Nocturnal Environments: Genomic Insights from a Highly Derived Visual Phenotype 2019 ·Genome Biology and Evolution ·Rui Borges, (unknown), (unknown), Warren E. Johnson, Stephen J. O’Brien, Guojie Zhang, M. Thomas P. Gilbert, Erich D. Jarvis, Agostinho Antunes	12
13	Adaptive genomic evolution of opsins reveals that early mammals flourished in nocturnal environments 2018 ·BMC Genomics ·Rui Borges, Warren E. Johnson, Stephen J. O’Brien, (unknown), Christopher P. Heesy, Agostinho Antunes	25
14	Measuring phylogenetic signal between categorical traits and phylogenies 2018 ·Bioinformatics ·Rui Borges, João Paulo Machado, (unknown), Ana Paula Rocha, Agostinho Antunes	91
15	Low Genetic Diversity and High Invasion Success of Corbicula fluminea (Bivalvia, Corbiculidae) (Müller, 1774) in Portugal 2016 ·PLoS ONE ·(unknown), Ronaldo Sousa, (unknown), Rui Borges, (unknown), Vı́tor Vasconcelos, Lúcia Guilhermino, Agostinho Antunes	34
16	Gene loss, adaptive evolution and the co-evolution of plumage coloration genes with opsins in birds 2015 ·BMC Genomics ·Rui Borges, Imran Khan, Warren E. Johnson, M. Thomas P. Gilbert, Guojie Zhang, Erich D. Jarvis, Stephen J. O’Brien, Agostinho Antunes	51
17	The Role of Gene Duplication and Unconstrained Selective Pressures in the Melanopsin Gene Family Evolution and Vertebrate Circadian Rhythm Regulation 2012 ·PLoS ONE ·Rui Borges, Warren E. Johnson, Stephen J. O’Brien, Vı́tor Vasconcelos, Agostinho Antunes	30

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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