Rafal Wiewiora

4.2k total citations · 1 hit paper
10 papers, 2.1k citations indexed

About

Rafal Wiewiora is a scholar working on Molecular Biology, Spectroscopy and Materials Chemistry. According to data from OpenAlex, Rafal Wiewiora has authored 10 papers receiving a total of 2.1k indexed citations (citations by other indexed papers that have themselves been cited), including 8 papers in Molecular Biology, 2 papers in Spectroscopy and 2 papers in Materials Chemistry. Recurrent topics in Rafal Wiewiora's work include Protein Structure and Dynamics (4 papers), Machine Learning in Materials Science (2 papers) and Protein Degradation and Inhibitors (2 papers). Rafal Wiewiora is often cited by papers focused on Protein Structure and Dynamics (4 papers), Machine Learning in Materials Science (2 papers) and Protein Degradation and Inhibitors (2 papers). Rafal Wiewiora collaborates with scholars based in United States, United Kingdom and Germany. Rafal Wiewiora's co-authors include John D. Chodera, Jason Swails, Robert T. McGibbon, Yutong Zhao, Lee‐Ping Wang, Matthew P. Harrigan, Vijay S. Pande, Peter Eastman, Andrew C. Simmonett and Chaya Stern and has published in prestigious journals such as SHILAP Revista de lepidopterología, Biophysical Journal and Nature Chemistry.

In The Last Decade

Rafal Wiewiora

10 papers receiving 2.1k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

OpenMM 7: Rapid development of high performance algorithms for molecular dynamics

2017 1.7k citations Peter Eastman, Jason Swails et al. PLoS Computational Biology profile →

Peers

Countries citing papers authored by Rafal Wiewiora

Since Specialization

Citations

This map shows the geographic impact of Rafal Wiewiora's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Rafal Wiewiora with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Rafal Wiewiora more than expected).

Fields of papers citing papers by Rafal Wiewiora

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Rafal Wiewiora. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Rafal Wiewiora. The network helps show where Rafal Wiewiora may publish in the future.

Co-authorship network of co-authors of Rafal Wiewiora

This figure shows the co-authorship network connecting the top 25 collaborators of Rafal Wiewiora. A scholar is included among the top collaborators of Rafal Wiewiora based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Rafal Wiewiora. Rafal Wiewiora is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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10 of 10 papers shown

#	Work	Indexed citations
1	Non-Markovian Dynamic Models Identify Non-Canonical KRAS-VHL Encounter Complex Conformations for Novel PROTAC Design 2024 ·SHILAP Revista de lepidopterología ·Yunrui Qiu, Rafal Wiewiora, Jesús A. Izaguirre, Huafeng Xu, Woody Sherman, Weiping Tang, Xuhui Huang	6
2	Molecular Latent Space Simulators for Distributed and Multimolecular Trajectories 2023 ·The Journal of Physical Chemistry A ·(unknown), Zachary A. McDargh, Rafal Wiewiora, Jesús A. Izaguirre, Huafeng Xu, Andrew L. Ferguson	4
3	What Markov State Models Can and Cannot Do: Correlation versus Path-Based Observables in Protein-Folding Models 2021 ·Journal of Chemical Theory and Computation ·Ernesto Suárez, Rafal Wiewiora, (unknown), Frank Noé, John D. Chodera, Daniel M. Zuckerman	45
4	SARS-CoV-2 simulations go exascale to predict dramatic spike opening and cryptic pockets across the proteome 2021 ·Nature Chemistry ·Maxwell I. Zimmerman, Justin R. Porter, Michael D. Ward, Sukrit Singh, Neha Vithani, Artur Meller, Upasana L. Mallimadugula, (unknown), Jonathan Borowsky, Rafal Wiewiora, Matthew F. D. Hurley, Aoife M. Harbison, Carl A. Fogarty, (unknown), Elisa Fadda, Vincent A. Voelz, John D. Chodera, Gregory R. Bowman	167
5	Site-Specific Lipidation Enhances IFITM3 Membrane Interactions and Antiviral Activity 2021 ·ACS Chemical Biology ·(unknown), Hwa-Young Lee, Tandrila Das, Shibani Bhattacharya, (unknown), Rafal Wiewiora, Isaac P. Witte, Yumeng Li, Tao Peng, Wonpil Im, Howard C. Hang	28
6	Machine learning force fields and coarse-grained variables in molecular\n dynamics: application to materials and biological systems 2020 ·arXiv (Cornell University) ·Paraskevi Gkeka, Gabriel Stoltz, Amir Barati Farimani, (unknown), Michele Ceriotti, John D. Chodera, Aaron R. Dinner, Andrew L. Ferguson, Jean‐Bernard Maillet, Hervé Minoux, Christine Peter, Fabio Pietrucci, (unknown), Alexandre Tkatchenko, (unknown), Rafal Wiewiora, Tony Lelièvre	138
7	Ancestral reconstruction reveals mechanisms of ERK regulatory evolution 2019 ·eLife ·Dajun Sang, Sudarshan Pinglay, Rafal Wiewiora, Myvizhi Esai Selvan, Hua Jane Lou, John D. Chodera, Benjamin E. Turk, Zeynep H. Gümüş, Liam J. Holt	18
8	Conformational Dynamics of Histone Methyltransferase SET8 Probed by Millisecond-Timescale Molecular Dynamics, Markov State Modeling and Biochemical Experiments 2018 ·Biophysical Journal ·Rafal Wiewiora, Shi Chen, Minkui Luo, John D. Chodera	1
9	OpenMM 7: Rapid development of high performance algorithms for molecular dynamics breakdown → 2017 ·PLoS Computational Biology ·Peter Eastman, Jason Swails, John D. Chodera, Robert T. McGibbon, Yutong Zhao, Kyle A. Beauchamp, Lee‐Ping Wang, Andrew C. Simmonett, Matthew P. Harrigan, Chaya Stern, Rafal Wiewiora, Bernard R. Brooks, Vijay S. Pande	1736
10	An efficient one-pot synthesis of 2-bromo-6-aryl[5H]pyrrolo[2,3-b]pyrazines 2015 ·Tetrahedron Letters ·Iain Simpson, Stephen A. St-Gallay, S.P. Stokes, David Whittaker, Rafal Wiewiora	5

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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