Paul M. Berube

4.6k total citations · 2 hit papers
26 papers, 3.0k citations indexed

About

Paul M. Berube is a scholar working on Ecology, Molecular Biology and Oceanography. According to data from OpenAlex, Paul M. Berube has authored 26 papers receiving a total of 3.0k indexed citations (citations by other indexed papers that have themselves been cited), including 21 papers in Ecology, 18 papers in Molecular Biology and 10 papers in Oceanography. Recurrent topics in Paul M. Berube's work include Microbial Community Ecology and Physiology (20 papers), Protist diversity and phylogeny (13 papers) and Marine and coastal ecosystems (10 papers). Paul M. Berube is often cited by papers focused on Microbial Community Ecology and Physiology (20 papers), Protist diversity and phylogeny (13 papers) and Marine and coastal ecosystems (10 papers). Paul M. Berube collaborates with scholars based in United States, Netherlands and Israel. Paul M. Berube's co-authors include David A. Stahl, José R. de la Torre, Willm Martens‐Habbena, Hidetoshi Urakawa, Sallie W. Chisholm, Steven J. Biller, Debbie Lindell, Adam C. Martiny, Satish Kathuria and Sara E. Roggensack and has published in prestigious journals such as Nature, Cell and Proceedings of the National Academy of Sciences.

In The Last Decade

Paul M. Berube

25 papers receiving 3.0k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria

2009 1.3k citations Willm Martens‐Habbena, Paul M. Berube et al. Nature profile →
Prochlorococcus: the structure and function of collective diversity

2014 387 citations Steven J. Biller, Paul M. Berube et al. Nature Reviews Microbiology profile →

Peers

Countries citing papers authored by Paul M. Berube

Since Specialization

Citations

This map shows the geographic impact of Paul M. Berube's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Paul M. Berube with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Paul M. Berube more than expected).

Fields of papers citing papers by Paul M. Berube

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Paul M. Berube. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Paul M. Berube. The network helps show where Paul M. Berube may publish in the future.

Co-authorship network of co-authors of Paul M. Berube

This figure shows the co-authorship network connecting the top 25 collaborators of Paul M. Berube. A scholar is included among the top collaborators of Paul M. Berube based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Paul M. Berube. Paul M. Berube is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Net rate of lateral gene transfer in marine prokaryoplankton 2025 ·The ISME Journal ·Ramūnas Stepanauskas, Julia M. Brown, (unknown), Uyen Mai, Gregory S. Gavelis, Maria Pachiadaki, Oliver Bezuidt, Jacob Munson-McGee, (unknown), Steven J. Biller, Paul M. Berube, Siavash Mirarab	0
2	Novel isolates expand the physiological diversity of Prochlorococcus and illuminate its macroevolution 2024 ·mBio ·Jamie W. Becker, Shaul Pollak, Jessie W Berta-Thompson, Kevin W. Becker, Rogier Braakman, Keven Dooley, Thomas Hackl, Allison Coe, (unknown), Kristen N. LeGault, Paul M. Berube, Steven J. Biller, Andrés Cubillos-Ruiz, Benjamin A. S. Van Mooy, Sallie W. Chisholm	2
3	Production and cross-feeding of nitrite within Prochlorococcus populations 2023 ·mBio ·Paul M. Berube, (unknown), (unknown), (unknown), Sallie W. Chisholm	4
4	Novel integrative elements and genomic plasticity in ocean ecosystems 2023 ·Cell ·Thomas Hackl, Raphaël Laurenceau, Markus J. Ankenbrand, Christina Bliem, (unknown), (unknown), Keven Dooley, (unknown), Shane Hogle, Paul M. Berube, Gabriel E. Leventhal, Elaine Luo, John M. Eppley, Ahmed A. Zayed, John Beaulaurier, Ramūnas Stepanauskas, Matthew B. Sullivan, Edward F. DeLong, Steven J. Biller, Sallie W. Chisholm	44
5	Draft genomes of three closely related low light-adapted Prochlorococcus 2023 ·BMC Genomic Data ·Jessie W Berta-Thompson, (unknown), Andrés Cubillos-Ruiz, Thomas Hackl, Jamie W. Becker, Allison Coe, Steven J. Biller, Paul M. Berube, Sallie W. Chisholm	2
6	Phosphonate production by marine microbes: Exploring new sources and potential function 2022 ·Proceedings of the National Academy of Sciences ·Marianne Acker, Shane Hogle, Paul M. Berube, Thomas Hackl, Allison Coe, Ramūnas Stepanauskas, Sallie W. Chisholm, Daniel J. Repeta	46
7	Siderophores as an iron source for picocyanobacteria in deep chlorophyll maximum layers of the oligotrophic ocean 2022 ·The ISME Journal ·Shane Hogle, Thomas Hackl, Randelle M. Bundy, (unknown), Brandon M. Satinsky, Teppo Hiltunen, Steven J. Biller, Paul M. Berube, Sallie W. Chisholm	26
8	Evaluating and Improving Small Subunit rRNA PCR Primer Coverage for Bacteria, Archaea, and Eukaryotes Using Metagenomes from Global Ocean Surveys 2021 ·mSystems ·Jesse McNichol, Paul M. Berube, Steven J. Biller, Jed A. Fuhrman	53
9	Charting the Complexity of the Marine Microbiome through Single-Cell Genomics 2019 ·Cell ·Maria Pachiadaki, Julia M. Brown, Joseph Brown, Oliver Bezuidt, Paul M. Berube, Steven J. Biller, Nicole Poulton, Michael D. Burkart, James J. La Clair, Sallie W. Chisholm, Ramūnas Stepanauskas	127
10	Marine microbial metagenomes sampled across space and time 2018 ·Scientific Data ·Steven J. Biller, Paul M. Berube, Keven Dooley, (unknown), Brandon M. Satinsky, Thomas Hackl, Shane Hogle, Allison Coe, Kristin Bergauer, Heather A. Bouman, Thomas J. Browning, Daniele De Corte, Christel Hassler, (unknown), Jeremy E Jacquot, Elizabeth W. Maas, Thomas Reinthaler, Eva Sintes, Taichi Yokokawa, Sallie W. Chisholm	132
11	Nitrogen cost minimization is promoted by structural changes in the transcriptome of N-deprived Prochlorococcus cells 2017 ·The ISME Journal ·Robert W. Read, Paul M. Berube, Steven J. Biller, Iva Neveux, Andrés Cubillos-Ruiz, Sallie W. Chisholm, Joseph J. Grzymski	22
12	Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus 2014 ·Scientific Data ·Steven J. Biller, Paul M. Berube, Jessie W Berta-Thompson, Libusha Kelly, Sara E. Roggensack, (unknown), K. Roache-Johnson, Huiming Ding, Stephen J. Giovannoni, Gabrielle Rocap, Lisa R. Moore, Sallie W. Chisholm	83
13	Closely related phytoplankton species produce similar suites of dissolved organic matter 2014 ·Frontiers in Microbiology ·Jamie W. Becker, Paul M. Berube, Christopher L. Follett, John Waterbury, Sallie W. Chisholm, Edward F. DeLong, Daniel J. Repeta	110
14	Prochlorococcus: the structure and function of collective diversity breakdown → 2014 ·Nature Reviews Microbiology ·Steven J. Biller, Paul M. Berube, Debbie Lindell, Sallie W. Chisholm	387
15	Physiology and evolution of nitrate acquisition in Prochlorococcus 2014 ·eScholarship (California Digital Library) ·Paul M. Berube, Steven J. Biller, Alyssa G. Kent, Jessie W Berta-Thompson, Sara E. Roggensack, K. Roache-Johnson, (unknown), Lisa R. Moore, Joshua D. Meisel, Daniel Sher, Luke Thompson, Lisa Campbell, Adam C. Martiny, Sallie W. Chisholm	7
16	The Divergent AmoC ₃ Subunit of Ammonia Monooxygenase Functions as Part of a Stress Response System in Nitrosomonas europaea 2012 ·Journal of Bacteriology ·Paul M. Berube, David A. Stahl	31
17	Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria breakdown → 2009 ·Nature ·Willm Martens‐Habbena, Paul M. Berube, Hidetoshi Urakawa, José R. de la Torre, David A. Stahl	1341
18	Whole‐genome analysis of the ammonia‐oxidizing bacterium, Nitrosomonas eutropha C91: implications for niche adaptation 2007 ·Environmental Microbiology ·Lisa Y. Stein, Daniel J. Arp, Paul M. Berube, Patrick Chain, Loren Hauser, Mike S. M. Jetten, Martin G. Klotz, Frank W. Larimer, Jeanette M. Norton, Huub J. M. Op den Camp, Maria Shin, Xueming Wei	133
19	Transcription of All amoC Copies Is Associated with Recovery of Nitrosomonas europaea from Ammonia Starvation 2007 ·Journal of Bacteriology ·Paul M. Berube, Ram Samudrala, David A. Stahl	37
20	Eel fishing in the Great Lakes St. Lawrence River system during the 20th century: Signs of overfishing 2002 ·ScholarWorks@UMassAmherst (University of Massachusetts Amherst) ·(unknown), Paul M. Berube, Stéphane Tremblay, Guy Verreault	6

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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