Paul G. Giresi

27.1k total citations · 3 hit papers
26 papers, 7.4k citations indexed

About

Paul G. Giresi is a scholar working on Molecular Biology, Immunology and Oncology. According to data from OpenAlex, Paul G. Giresi has authored 26 papers receiving a total of 7.4k indexed citations (citations by other indexed papers that have themselves been cited), including 20 papers in Molecular Biology, 6 papers in Immunology and 4 papers in Oncology. Recurrent topics in Paul G. Giresi's work include Genomics and Chromatin Dynamics (10 papers), RNA Research and Splicing (8 papers) and RNA and protein synthesis mechanisms (5 papers). Paul G. Giresi is often cited by papers focused on Genomics and Chromatin Dynamics (10 papers), RNA Research and Splicing (8 papers) and RNA and protein synthesis mechanisms (5 papers). Paul G. Giresi collaborates with scholars based in United States, France and Belarus. Paul G. Giresi's co-authors include Howard Y. Chang, Lisa C. Zaba, William J. Greenleaf, Jason D. Buenrostro, Jason D. Lieb, Susan C. Kandarian, Eric J. Stevenson, Alan Koncarevic, Jonghwan Kim and Vishwanath R. Iyer and has published in prestigious journals such as Cell, Nature Genetics and Molecular Cell.

In The Last Decade

Paul G. Giresi

24 papers receiving 7.3k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

2013 3.9k citations Jason D. Buenrostro, Paul G. Giresi et al. Nature Methods profile →
FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin

2006 675 citations Paul G. Giresi, Jason D. Lieb et al. profile →
Hierarchical Mechanisms for Direct Reprogramming of Fibroblasts to Neurons

2013 470 citations Orly L. Wapinski, Thomas Vierbuchen et al. Cell profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Paul G. Giresi United States	20	6.1k	1.2k	890	760	746	26	7.4k
Jason X. Cheng United States	6	6.9k 1.1×	1.1k 1.0×	1.6k 1.8×	843 1.1×	1.2k 1.6×	8	9.0k
Peter Laslo United States	17	7.4k 1.2×	1.1k 1.0×	2.0k 2.3×	847 1.1×	1.3k 1.8×	20	9.9k
Eric Bertolino United States	10	7.7k 1.3×	1.2k 1.0×	1.9k 2.1×	972 1.3×	1.3k 1.7×	10	9.9k
Yasuyuki Ohkawa Japan	48	5.1k 0.8×	915 0.8×	979 1.1×	320 0.4×	650 0.9×	214	7.6k
Malte Spielmann Germany	27	3.9k 0.6×	1.2k 1.0×	800 0.9×	399 0.5×	678 0.9×	90	5.7k
Miguel Ramalho‐Santos United States	35	6.2k 1.0×	1.1k 0.9×	326 0.4×	610 0.8×	480 0.6×	57	7.4k
Yin C. Lin United States	17	7.6k 1.3×	1.1k 1.0×	2.3k 2.6×	912 1.2×	1.3k 1.8×	34	10.1k
Kenneth A. Ohgi United States	35	7.6k 1.3×	1.6k 1.4×	556 0.6×	492 0.6×	2.2k 2.9×	42	9.4k
Shyam Prabhakar Singapore	34	4.0k 0.7×	1.1k 1.0×	547 0.6×	461 0.6×	742 1.0×	70	5.3k
Gen Kondoh Japan	36	2.8k 0.5×	855 0.7×	1000 1.1×	471 0.6×	326 0.4×	95	5.2k

Countries citing papers authored by Paul G. Giresi

Since Specialization

Citations

This map shows the geographic impact of Paul G. Giresi's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Paul G. Giresi with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Paul G. Giresi more than expected).

Fields of papers citing papers by Paul G. Giresi

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Paul G. Giresi. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Paul G. Giresi. The network helps show where Paul G. Giresi may publish in the future.

Co-authorship network of co-authors of Paul G. Giresi

This figure shows the co-authorship network connecting the top 25 collaborators of Paul G. Giresi. A scholar is included among the top collaborators of Paul G. Giresi based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Paul G. Giresi. Paul G. Giresi is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Nelson, Michelle H., Hannah M. Knochelmann, Stefanie R. Bailey, et al.. (2020). Identification of human CD4 ⁺ T cell populations with distinct antitumor activity. Science Advances. 6(27). 31 indexed citations

Nelson, Michelle H., Hannah M. Knochelmann, Stefanie R. Bailey, et al.. (2020). Identification of human CD4+ T cell populations with distinct antitumor activity. PMC. 1 indexed citations

Lieb, Jason D., Joseph G. Ibrahim, Wei Sun, Paul G. Giresi, & Naim U. Rashid. (2019). ZINBA integrates local covariates with DNA-seq data to identify broad and narrow regions of enrichment, even within amplified genomic regions. UNC Libraries.

Giresi, Paul G.. (2019). Chromatin Profiles of Human Cells in Health and Disease Using FAIRE. Carolina Digital Repository (University of North Carolina at Chapel Hill).

Arda, H. Efsun, Jennifer Tsai, Paul G. Giresi, et al.. (2018). A Chromatin Basis for Cell Lineage and Disease Risk in the Human Pancreas. Cell Systems. 7(3). 310–322.e4. 24 indexed citations

Qu, Kun, Lisa C. Zaba, Ansuman T. Satpathy, et al.. (2017). Chromatin Accessibility Landscape of Cutaneous T Cell Lymphoma and Dynamic Response to HDAC Inhibitors. Cancer Cell. 32(1). 27–41.e4. 111 indexed citations

Qu, Kun, Lisa C. Zaba, Paul G. Giresi, et al.. (2015). Individuality and Variation of Personal Regulomes in Primary Human T Cells. Cell Systems. 1(1). 51–61. 105 indexed citations

Bao, Xiaomin, Adam J. Rubin, Kun Qu, et al.. (2015). A novel ATAC-seq approach reveals lineage-specific reinforcement of the open chromatin landscape via cooperation between BAF and p63. Genome biology. 16(1). 284–284. 112 indexed citations

Fleming, Joseph D., et al.. (2015). STAT3 acts through pre-existing nucleosome-depleted regions bound by FOS during an epigenetic switch linking inflammation to cancer. Epigenetics & Chromatin. 8(1). 7–7. 27 indexed citations

10.

Buenrostro, Jason D., Paul G. Giresi, Lisa C. Zaba, Howard Y. Chang, & William J. Greenleaf. (2014). Transposition of Native Chromatin for Fast and Sensitive Mulitmodal Analysis of Chromatin Architecture. Biophysical Journal. 106(2). 77a–77a. 5 indexed citations

11.

Buenrostro, Jason D., Paul G. Giresi, Lisa C. Zaba, Howard Y. Chang, & William J. Greenleaf. (2013). Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position. Nature Methods. 10(12). 1213–1218. 3915 indexed citations breakdown →

12.

Wapinski, Orly L., Thomas Vierbuchen, Kun Qu, et al.. (2013). Hierarchical Mechanisms for Direct Reprogramming of Fibroblasts to Neurons. Cell. 155(3). 621–635. 470 indexed citations breakdown →

13.

Simon, Jeremy M., Paul G. Giresi, Ian J. Davis, & Jason D. Lieb. (2012). Using formaldehyde-assisted isolation of regulatory elements (FAIRE) to isolate active regulatory DNA. Nature Protocols. 7(2). 256–267. 244 indexed citations

14.

Rashid, Naim U., Paul G. Giresi, Joseph G. Ibrahim, Wei Sun, & Jason D. Lieb. (2011). ZINBA integrates local covariates with DNA-seq data to identify broad and narrow regions of enrichment, even within amplified genomic regions. Genome biology. 12(7). R67–R67. 122 indexed citations

15.

Gaulton, Kyle J., Takao Nammo, Lorenzo Pasquali, et al.. (2010). A map of open chromatin in human pancreatic islets. Nature Genetics. 42(3). 255–259. 390 indexed citations

16.

Giresi, Paul G. & Jason D. Lieb. (2009). Isolation of active regulatory elements from eukaryotic chromatin using FAIRE (Formaldehyde Assisted Isolation of Regulatory Elements). Methods. 48(3). 233–239. 150 indexed citations

17.

Azvolinsky, Anna, Paul G. Giresi, Jason D. Lieb, & Virginia A. Zakian. (2009). Highly Transcribed RNA Polymerase II Genes Are Impediments to Replication Fork Progression in Saccharomyces cerevisiae. Molecular Cell. 34(6). 722–734. 233 indexed citations

18.

Ercan, Sevinç, Paul G. Giresi, Christina M. Whittle, et al.. (2007). X chromosome repression by localization of the C. elegans dosage compensation machinery to sites of transcription initiation. Nature Genetics. 39(3). 403–408. 97 indexed citations

19.

Stevenson, Eric J., Alan Koncarevic, Paul G. Giresi, Robert W. Jackman, & Susan C. Kandarian. (2004). Transcriptional profile of a myotube starvation model of atrophy. Journal of Applied Physiology. 98(4). 1396–1406. 47 indexed citations

20.

Stevenson, Eric J., Paul G. Giresi, Alan Koncarevic, & Susan C. Kandarian. (2003). Global analysis of gene expression patterns during disuse atrophy in rat skeletal muscle. The Journal of Physiology. 551(1). 33–48. 216 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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