Niko Popitsch

2.7k citations

46 papers · 1.2k indexed · h-index 20

Impact in

Parasitology top 5%
- Vector-borne infectious diseases
Cancer Research top 10%
- Cancer Genomics and Diagnostics

Papers in

Parasitology 4
Cancer Research 9
- Cancer Genomics and Diagnostics 6

Co-authors: Meghan Lybecker Bernhard Haslhofer Philipp Rescheneder Jenny C. Taylor Renée Schroeder Ivana Bilusic Arndt von Haeseler Alistair T. Pagnamenta
Journals: Bioinformatics (4 papers)Nucleic Acids Research (3 papers)Molecular Cell (2 papers)Blood (2 papers)Clinical Cancer Research (1 paper)
Partner nations: Austria United Kingdom United States

In The Last Decade

Niko Popitsch

43 papers receiving 1.2k citations

Peers

Countries citing papers authored by Niko Popitsch

Since Specialization

Citations

This map shows the geographic impact of Niko Popitsch's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Niko Popitsch with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Niko Popitsch more than expected).

Fields of papers citing papers by Niko Popitsch

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Niko Popitsch. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Niko Popitsch. The network helps show where Niko Popitsch may publish in the future.

Co-authorship network

The 25 scholars most cited alongside Niko Popitsch, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Niko Popitsch Line = papers co-authored together Niko Popitsch links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	The identification of protein and RNA interactors of the splicing factor Caper in the adult Drosophila nervous system Frontiers in Molecular Neuroscience ·Kirsten Salmela, 寛子斉藤, Niko Popitsch, Christopher C. Ebmeier, Jeremy M. Bono, Eugenia C. Olesnicky	2023	0
2	GREEN-DB: a framework for the annotation and prioritization of non-coding regulatory variants from whole-genome sequencing data Nucleic Acids Research ·Edoardo Giacopuzzi, Niko Popitsch, Jenny C. Taylor	2022	16
3	Nanopanel2 calls phased low-frequency variants in Nanopore panel sequencing data Bioinformatics ·Niko Popitsch, Sandra Preuner, Thomas Lion	2021	2
4	Transcriptome-Wide Profiling of RNA Stability Methods in molecular biology ·陈俐光, Chong Luo, Niko Popitsch, Veronika A. Herzog, Stefan L. Ameres	2021	3
5	Assessment of Pre-Analytical Sample Handling Conditions for Comprehensive Liquid Biopsy Analysis Journal of Molecular Diagnostics ·G. Brent Parker, Sabine Taschner‐Mandl, Daniele Maria Alves Teixeira S, Niko Popitsch, Ellen Heitzer, Volker Witt, René Geyeregger, Caroline Hutter, Raphaela Schwentner, Inge M. Ambros, Peter F. Ambros	2020	58
6	An inhibitor of complement C5 provides structural insights into activation Proceedings of the National Academy of Sciences ·裕太山上, Steven Johnson, Jennifer Neuhaus-Stern, T. J. Morgan, Zulkarnain Lubis, Niko Popitsch, Justin C. Deme, Matthijs M. Jore, Susan M. Lea	2019	27
7	The complete costs of genome sequencing: a microcosting study in cancer and rare diseases from a single center in the United Kingdom Genetics in Medicine ·Katharina Schwarze, James Buchanan, Jilles M. Fermont, Hélène Dreau, Mark Tilley, John Taylor, Pavlos Antoniou, Samantha J.L. Knight, Carme Camps, Melissa M. Pentony, Erika Kvikstad, Steve Harris, Niko Popitsch, Alistair T. Pagnamenta, Anna Schuh, Jenny C. Taylor, Sarah Wordsworth	2019	140
8	Sequencing of human genomes with nanopore technology Nature Communications ·Rory Bowden, R. W. Davies, Andreas Heger, Alistair T. Pagnamenta, Mariateresa de Cesare, Ulrich Stille, D Davidson, Colin Freeman, Fatima Dhalla, Smita Y. Patel, Niko Popitsch, Camilla L. C. Ip, Hannah Roberts, Silvia Salatino, Helen Lockstone, Gerton Lunter, Jenny C. Taylor, David Buck, Michael A. Simpson, Peter Donnelly	2019	129
9	VARAN-GIE: curation of genomic interval sets Bioinformatics ·Niko Popitsch	2018	2
10	Next-Generation Sequencing-based genomic profiling of brain metastases of primary ovarian cancer identifies high number of BRCA-mutations Journal of Neuro-Oncology ·Tereza Gregušová, Eric Hamer, Anna S. Berghoff, V.B. Sirotkin, Niko Popitsch, Christoph B. Geier, Lukas Kenner, P. Birner, Berthold Streubel, Matthias Preusser	2017	23
11	Whole-genome sequencing identifies homozygous BRCA2 deletion guiding treatment in dedifferentiated prostate cancer Molecular Case Studies ·Karin Purshouse, Anna Schuh, Benjamin P. Fairfax, Samantha J.L. Knight, Pavlos Antoniou, Hélène Dreau, Niko Popitsch, Kevin C. Gatter, Ian Roberts, Lisa Browning, Zoë Traill, David Kerr, Clare Verrill, Mark Tuthill, Jenny C. Taylor, Andrew Protheroe	2017	8
12	Temperature-dependent sRNA transcriptome of the Lyme disease spirochete BMC Genomics ·Niko Popitsch, Ivana Bilusic, Philipp Rescheneder, Renée Schroeder, Meghan Lybecker	2017	35
13	Analysis of exome data for 4293 trios suggests GPI-anchor biogenesis defects are a rare cause of developmental disorders European Journal of Human Genetics ·(unknown), Alistair T. Pagnamenta, Yoshiko Murakami, John Taylor, Consuelo Anzilotti, Malcolm F. Howard, J. López-Santiago, Diana Johnson, 蒋娇, Sahar Mansour, I. Karen Temple, Юрій Бабков, Elisabeth Rosser, Rachel Harrison, 房錫運, Niko Popitsch, Taroh Kinoshita, Jenny C. Taylor, Usha Kini	2017	48
14	In vivoexpression technology and 5′ end mapping of theBorrelia burgdorferitranscriptome identify novel RNAs expressed during mammalian infection Nucleic Acids Research ·Philip P. Adams, R. van Poppel, Niko Popitsch, Ivana Bilusic, Renée Schroeder, Meghan Lybecker, Mollie W. Jewett	2016	57
15	Targeted Next-Generation Sequencing of Plasma DNA from Cancer Patients: Factors Influencing Consistency with Tumour DNA and Prospective Investigation of Its Utility for Diagnosis PLoS ONE ·Pamela J. Kaisaki, Tieming Zhao, Niko Popitsch, Carlos Camps, Melissa M. Pentony, J Nitka, Suzanne Page, Kulvinder Kaur, Dimitris Vavoulis, Shirley Henderson, Avinash Gupta, Mark R. Middleton, Ioannis Karydis, Denis Talbot, Anna Schuh, Jenny C. Taylor	2016	14
16	The Borrelia burgdorferi RelA/SpoT Homolog and Stringent Response Regulate Survival in the Tick Vector and Global Gene Expression during Starvation PLoS Pathogens ·Dan Drecktrah, Meghan Lybecker, Niko Popitsch, Philipp Rescheneder, D L Armstrong, D. Scott Samuels	2015	78
17	Spectrum of gene mutations detected by next generation exome sequencing in brain metastases of lung adenocarcinoma European Journal of Cancer ·Matthias Preusser, Anna S. Berghoff, Hans-Ulrich Giersch, Christoph Zielinski, Johannes A. Hainfellner, Eric Hamer, Niko Popitsch, Christoph B. Geier, Berthold Streubel, Peter Birner	2015	31
18	Revisiting the coding potential of theE. coligenome through Hfq co-immunoprecipitation RNA Biology ·Ivana Bilusic, Niko Popitsch, Philipp Rescheneder, Renée Schroeder, Meghan Lybecker	2014	59
19	Novel Clinically Relevant Genes in Gastrointestinal Stromal Tumors Identified by Exome Sequencing Clinical Cancer Research ·Sebastian F. Schoppmann, Ursula Vinatzer, Niko Popitsch, Martina Mittlböck, Eric Hamer, Gerd Jomrich, Berthold Streubel, Peter Birner	2013	28
20	UROBE: A Prototype for WIKI Preservation iPRES ·Niko Popitsch, SAMEER MOHAMMED SAYYD, Wolfgang Philipp	2010	1

About Niko Popitsch

Niko Popitsch is a scholar working on Parasitology, Cancer Research, Aging, Management Science and Operations Research and Artificial Intelligence, having authored 46 papers that have together received 1.2k indexed citations. Recurring topics across this work include Semantic Web and Ontologies (10 papers), RNA modifications and cancer (7 papers), RNA Research and Splicing (7 papers), Genomics and Phylogenetic Studies (6 papers), Cancer Genomics and Diagnostics (6 papers), RNA and protein synthesis mechanisms (6 papers), Advanced Database Systems and Queries (6 papers) and Data Quality and Management (6 papers). The work is most often cited by research in Parasitology (168 citations), Cancer Research (187 citations), Molecular Biology (560 citations), Genetics (219 citations) and Insect Science (92 citations). Niko Popitsch has collaborated with scholars based in Austria, United Kingdom and United States. Frequent co-authors include Meghan Lybecker, Bernhard Haslhofer, Philipp Rescheneder, Jenny C. Taylor, Renée Schroeder, Ivana Bilusic, Arndt von Haeseler, Alistair T. Pagnamenta, Samantha J.L. Knight and Anna Schuh. Their work appears in journals such as Bioinformatics, Nucleic Acids Research, Molecular Cell, Blood and Clinical Cancer Research.

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