Nadine Holmes

8.1k total citations
27 papers, 625 citations indexed

About

Nadine Holmes is a scholar working on Molecular Biology, Infectious Diseases and Pediatrics, Perinatology and Child Health. According to data from OpenAlex, Nadine Holmes has authored 27 papers receiving a total of 625 indexed citations (citations by other indexed papers that have themselves been cited), including 14 papers in Molecular Biology, 6 papers in Infectious Diseases and 3 papers in Pediatrics, Perinatology and Child Health. Recurrent topics in Nadine Holmes's work include Genomics and Phylogenetic Studies (9 papers), Birth, Development, and Health (3 papers) and Pregnancy and preeclampsia studies (2 papers). Nadine Holmes is often cited by papers focused on Genomics and Phylogenetic Studies (9 papers), Birth, Development, and Health (3 papers) and Pregnancy and preeclampsia studies (2 papers). Nadine Holmes collaborates with scholars based in United Kingdom, Australia and United States. Nadine Holmes's co-authors include Matthew Loose, Alexander Payne, Vardhman K. Rakyan, Rory Munro, Thomas B. Clarke, Johnny Debebe, Vitali Sintchenko, Qinning Wang, Peter Howard and Peter Jelfs and has published in prestigious journals such as Nature Communications, Nature Biotechnology and Bioinformatics.

In The Last Decade

Nadine Holmes

23 papers receiving 613 citations

Peers

Countries citing papers authored by Nadine Holmes

Since Specialization

Citations

This map shows the geographic impact of Nadine Holmes's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Nadine Holmes with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Nadine Holmes more than expected).

Fields of papers citing papers by Nadine Holmes

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Nadine Holmes. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Nadine Holmes. The network helps show where Nadine Holmes may publish in the future.

Co-authorship network of co-authors of Nadine Holmes

This figure shows the co-authorship network connecting the top 25 collaborators of Nadine Holmes. A scholar is included among the top collaborators of Nadine Holmes based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Nadine Holmes. Nadine Holmes is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Enhancing nanopore adaptive sampling for PromethION using readfish at scale 2025 ·Genome Research ·Rory Munro, (unknown), Nadine Holmes, Christopher Moore, (unknown), Matthew Loose	2
2	An International ASXL3 Natural History Study: Deep Phenotypic Analyses Including Detailed Reports of a Milder Phenotype, Novel Associations, and Clinical Recommendations 2025 ·American Journal of Medical Genetics Part A ·(unknown), Nadine Holmes, Anne‐Sophie Denommé‐Pichon, Marie Vincent, (unknown), (unknown), Bertrand Isidor, Charlotte W. Ockeloen, Efterpi Pavlidou, Helen Stewart, Virginie J. M. Verhoeven, Athina Ververi, Abhijit Dixit, Ajoy Sarkar, (unknown), Evan Reid, Meena Balasubramanian	1
3	Single cell long read whole genome sequencing reveals somatic transposon activity in human brain 2025 ·Communications Biology ·(unknown), Ester Kalef-Ezra, Dominic W. Horner, Xinchang Zheng, Nadine Holmes, Marco Toffoli, Zeliha Sahin, Yi Han, Heer H. Mehta, Sonja W. Scholz, Clifton L. Dalgard, Donna M. Muzny, Adam Ameur, Fritz J. Sedlazeck, Christos Proukakis	0
4	Paternal undernutrition and overnutrition modify semen composition and preimplantation embryo developmental kinetics in mice 2024 ·BMC Biology ·Hannah L. Morgan, (unknown), Nadine Holmes, (unknown), Victoria Wright, Clare Coveney, Catherine Winder, Donna O’Neil, Warwick B. Dunn, David J. Boocock, Adam J. Watkins	5
5	A single-cell atlas of pig gastrulation as a resource for comparative embryology 2024 ·Nature Communications ·(unknown), (unknown), Doris Klisch, (unknown), Takuya Azami, Daniel E. Goszczynski, (unknown), (unknown), Nadine Holmes, Fei Sang, (unknown), Matthew Loose, Jennifer Nichols, Ramiro Alberio	7
6	A framework for real-time monitoring, analysis and adaptive sampling of viral amplicon nanopore sequencing 2023 ·Frontiers in Genetics ·Rory Munro, Nadine Holmes, Christopher Moore, Matthew Carlile, Alexander Payne, John R. Tyson, Tom Williams, Christopher Alder, Luke B. Snell, Gaia Nebbia, (unknown), Matthew Loose	10
7	NANOG is required to establish the competence for germ-layer differentiation in the basal tetrapod axolotl 2023 ·PLoS Biology ·(unknown), (unknown), (unknown), Helena Acosta, Zoltán Ferjentsik, (unknown), Alexander Payne, Benjamin S. Simpson, (unknown), James E. Dixon, Nadine Holmes, Fei Sang, Ramiro Alberio, Matthew Loose, Andrew D. Johnson	0
8	Differential and defective transcription of koala retrovirus indicates the complexity of host and virus evolution 2022 ·Journal of General Virology ·Rachael Tarlinton, Alistair R. Legione, Nishat Sarker, (unknown), J. Meers, Lee McMichael, G. C. Simmons, Helen Owen, Jennifer M. Seddon, Gregory J. Dick, (unknown), (unknown), Darren J. Trott, Natasha Speight, Nadine Holmes, Matthew Loose, Richard D. Emes	10
9	Paternal low protein diet perturbs inter-generational metabolic homeostasis in a tissue-specific manner in mice 2022 ·Communications Biology ·Hannah L. Morgan, Samuel Furse, Irundika H.K. Dias, (unknown), Marcos Castellanos, (unknown), Sean May, Nadine Holmes, Matthew Carlile, Fei Sang, Victoria Wright, Albert Koulman, Adam J. Watkins	15
10	Use of Bulk Segregant Analysis for Determining the Genetic Basis of Azole Resistance in the Opportunistic Pathogen Aspergillus fumigatus 2022 ·Frontiers in Cellular and Infection Microbiology ·George D. Ashton, Fei Sang, Martin Blythe, Daniel Zadik, Nadine Holmes, Sunir Malla, Simone M. T. Camps, Victoria Wright, Willem J. G. Melchers, Paul E. Verweij, Paul S. Dyer	5
11	Genetic variation at mouse and human ribosomal DNA influences associated epigenetic states 2022 ·Genome biology ·(unknown), Robert A. Seaborne, (unknown), (unknown), Harunori Yoshikawa, Pui Pik Law, (unknown), (unknown), (unknown), Nadine Holmes, (unknown), Alan Hodgkinson, Sarah J. Marzi, Madapura M. Pradeepa, Matthew Loose, Michelle L. Holland, Vardhman K. Rakyan	19
12	Genome Reference Assembly for Bottlenecked Southern Australian Koalas 2022 ·Genome Biology and Evolution ·Adam Blanchard, Richard D. Emes, Alex D. Greenwood, Nadine Holmes, Matthew Loose, (unknown), J. Meers, Natasha Speight, Rachael Tarlinton	3
13	minoTour, real-time monitoring and analysis for nanopore sequencers 2021 ·Bioinformatics ·Rory Munro, (unknown), Alexander Payne, (unknown), (unknown), Nadine Holmes, Matthew Loose	9
14	The Impact of Real-Time Whole-Genome Sequencing in Controlling Healthcare-Associated SARS-CoV-2 Outbreaks 2021 ·The Journal of Infectious Diseases ·(unknown), (unknown), (unknown), (unknown), Theocharis Tsoleridis, Louise Berry, N. Mahida, William L. Irving, Christopher Moore, Nadine Holmes, Jonathan K. Ball, (unknown), C. Patrick McClure	24
15	Stat3 oxidation-dependent regulation of gene expression impacts on developmental processes and involves cooperation with Hif-1α 2020 ·PLoS ONE ·(unknown), Carolyn G. Palmer, Nadine Holmes, Fei Sang, Andrew C. Larner, Rahul Bhosale, Peter E. Shaw	11
16	BulkVis: a graphical viewer for Oxford nanopore bulk FAST5 files 2018 ·Bioinformatics ·Alexander Payne, Nadine Holmes, Vardhman K. Rakyan, Matthew Loose	206
17	Detection and incidence of Bordetella holmesii in respiratory specimens from patients with pertussis-like symptoms in New South Wales, Australia 2018 ·Pathology ·(unknown), Verlaine Timms, Nadine Holmes, Vitali Sintchenko	12
18	Whole genome sequencing of Salmonella Typhimurium illuminates distinct outbreaks caused by an endemic multi-locus variable number tandem repeat analysis type in Australia, 2014 2016 ·BMC Microbiology ·Anastasia Phillips, (unknown), Qinning Wang, Nadine Holmes, (unknown), (unknown), Peter Howard, Sophie Octavia, Ruiting Lan, Vitali Sintchenko	33
19	Identifying Likely Transmission Pathways within a 10-Year Community Outbreak of Tuberculosis by High-Depth Whole Genome Sequencing 2016 ·PLoS ONE ·Alexander C. Outhred, Nadine Holmes, Rosemarie Sadsad, Elena Martínez, Peter Jelfs, Grant Hill-Cawthorne, Gwendolyn L. Gilbert, Ben J. Marais, Vitali Sintchenko	14
20	Genome sequencing reveals novel deletions associated with secondary resistance to pyrazinamide in MDRMycobacterium tuberculosis 2015 ·Journal of Antimicrobial Chemotherapy ·Elena Martínez, Nadine Holmes, Peter Jelfs, Vitali Sintchenko	15

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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