Mark A. Hallen

929 total citations
22 papers, 404 citations indexed

About

Mark A. Hallen is a scholar working on Molecular Biology, Cell Biology and Computational Theory and Mathematics. According to data from OpenAlex, Mark A. Hallen has authored 22 papers receiving a total of 404 indexed citations (citations by other indexed papers that have themselves been cited), including 20 papers in Molecular Biology, 8 papers in Cell Biology and 3 papers in Computational Theory and Mathematics. Recurrent topics in Mark A. Hallen's work include Protein Structure and Dynamics (9 papers), Microtubule and mitosis dynamics (8 papers) and RNA and protein synthesis mechanisms (7 papers). Mark A. Hallen is often cited by papers focused on Protein Structure and Dynamics (9 papers), Microtubule and mitosis dynamics (8 papers) and RNA and protein synthesis mechanisms (7 papers). Mark A. Hallen collaborates with scholars based in United States, United Kingdom and China. Mark A. Hallen's co-authors include Bruce R. Donald, Sharyn A. Endow, D.A. Keedy, Zhangyi Liang, Pablo Gaínza, Jonathan Jou, Ying Xu, Michael C. Fitzgerald, Jian‐Wei Zou and Hans D. Hallen and has published in prestigious journals such as The Journal of Cell Biology, Bioinformatics and PLoS ONE.

In The Last Decade

Mark A. Hallen

22 papers receiving 402 citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Mark A. Hallen United States 13 333 123 51 40 38 22 404
Jean‐François Gaucher France 10 274 0.8× 92 0.7× 23 0.5× 62 1.6× 10 0.3× 16 379
Ognjen Perišić United States 11 369 1.1× 29 0.2× 51 1.0× 38 0.9× 53 1.4× 18 506
I. Fita Spain 8 436 1.3× 139 1.1× 13 0.3× 39 1.0× 24 0.6× 12 566
Steffen Jaensch Belgium 9 496 1.5× 262 2.1× 33 0.6× 21 0.5× 49 1.3× 17 737
Vinícius G. Contessoto Brazil 16 405 1.2× 54 0.4× 13 0.3× 104 2.6× 50 1.3× 31 472
Martin Kulke Germany 10 211 0.6× 35 0.3× 46 0.9× 42 1.1× 24 0.6× 25 358
Anna Rutkowska Germany 12 567 1.7× 69 0.6× 12 0.2× 92 2.3× 42 1.1× 17 636
Vasileios Rantos Germany 5 375 1.1× 78 0.6× 12 0.2× 40 1.0× 8 0.2× 5 461
Andrew H. Beaven United States 12 463 1.4× 34 0.3× 29 0.6× 24 0.6× 8 0.2× 20 577
João M. Martins Denmark 10 286 0.9× 18 0.1× 62 1.2× 67 1.7× 10 0.3× 16 347

Countries citing papers authored by Mark A. Hallen

Since Specialization
Citations

This map shows the geographic impact of Mark A. Hallen's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Mark A. Hallen with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Mark A. Hallen more than expected).

Fields of papers citing papers by Mark A. Hallen

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Mark A. Hallen. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Mark A. Hallen. The network helps show where Mark A. Hallen may publish in the future.

Co-authorship network of co-authors of Mark A. Hallen

This figure shows the co-authorship network connecting the top 25 collaborators of Mark A. Hallen. A scholar is included among the top collaborators of Mark A. Hallen based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Mark A. Hallen. Mark A. Hallen is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Hallen, Mark A. & Bruce R. Donald. (2019). Protein design by provable algorithms. Communications of the ACM. 62(10). 76–84. 10 indexed citations
2.
Hallen, Mark A., Jeffrey W. Martin, Adegoke A. Ojewole, et al.. (2018). OSPREY 3.0: Open‐source protein redesign for you, with powerful new features. Journal of Computational Chemistry. 39(30). 2494–2507. 46 indexed citations
3.
Hallen, Mark A.. (2018). PLUG (Pruning of Local Unrealistic Geometries) removes restrictions on biophysical modeling for protein design. Proteins Structure Function and Bioinformatics. 87(1). 62–73. 2 indexed citations
4.
Hallen, Mark A. & Bruce R. Donald. (2017). CATS (Coordinates of Atoms by Taylor Series): protein design with backbone flexibility in all locally feasible directions. Bioinformatics. 33(14). i5–i12. 13 indexed citations
5.
6.
Dong, Yuxi C., Jingtian Zhou, Mark A. Hallen, et al.. (2016). cOSPREY: A Cloud-Based Distributed Algorithm for Large-Scale Computational Protein Design. Journal of Computational Biology. 23(9). 737–749. 2 indexed citations
7.
Hallen, Mark A., Jonathan Jou, & Bruce R. Donald. (2016). LUTE (Local Unpruned Tuple Expansion): Accurate Continuously Flexible Protein Design with General Energy Functions and Rigid Rotamer-Like Efficiency. Journal of Computational Biology. 24(6). 536–546. 13 indexed citations
8.
Roberts, Kyle E., Pablo Gaínza, Mark A. Hallen, & Bruce R. Donald. (2015). Fast gap-free enumeration of conformations and sequences for protein design. Proteins Structure Function and Bioinformatics. 83(10). 1859–1877. 12 indexed citations
9.
Hallen, Mark A., Pablo Gaínza, & Bruce R. Donald. (2015). Compact Representation of Continuous Energy Surfaces for More Efficient Protein Design. Journal of Chemical Theory and Computation. 11(5). 2292–2306. 16 indexed citations
10.
Hallen, Mark A., et al.. (2012). Altered Nucleotide-Microtubule Coupling and Increased Mechanical Output by a Kinesin Mutant. PLoS ONE. 7(10). e47148–e47148. 8 indexed citations
11.
Hallen, Mark A., D.A. Keedy, & Bruce R. Donald. (2012). Dead‐end elimination with perturbations (DEEPer): A provable protein design algorithm with continuous sidechain and backbone flexibility. Proteins Structure Function and Bioinformatics. 81(1). 18–39. 63 indexed citations
12.
Hallen, Mark A., Bochong Li, Yu Tanouchi, et al.. (2011). Computation of Steady-State Probability Distributions in Stochastic Models of Cellular Networks. PLoS Computational Biology. 7(10). e1002209–e1002209. 10 indexed citations
13.
Endow, Sharyn A. & Mark A. Hallen. (2011). Anastral spindle assembly and γ-tubulin in Drosophila oocytes. BMC Cell Biology. 12(1). 1–1. 34 indexed citations
14.
Hallen, Mark A., Zhangyi Liang, & Sharyn A. Endow. (2011). Two-state displacement by the kinesin-14 Ncd stalk. Biophysical Chemistry. 154(2-3). 56–65. 12 indexed citations
15.
Xu, Ying, et al.. (2011). Mass Spectrometry- and Lysine Amidination-Based Protocol for Thermodynamic Analysis of Protein Folding and Ligand Binding Interactions. Analytical Chemistry. 83(9). 3555–3562. 22 indexed citations
16.
Hallen, Mark A. & Sharyn A. Endow. (2009). Anastral Spindle Assembly: A Mathematical Model. Biophysical Journal. 97(8). 2191–2201. 10 indexed citations
17.
Hallen, Mark A. & Anita T. Layton. (2009). Expanding the scope of quantitative FRAP analysis. Journal of Theoretical Biology. 262(2). 295–305. 9 indexed citations
18.
Liang, Zhangyi, Mark A. Hallen, & Sharyn A. Endow. (2009). Mature Drosophila Meiosis I Spindles Comprise Microtubules of Mixed Polarity. Current Biology. 19(2). 163–168. 17 indexed citations
19.
Hallen, Mark A., et al.. (2008). Fluorescence Recovery Kinetic Analysis of γ-Tubulin Binding to the Mitotic Spindle. Biophysical Journal. 95(6). 3048–3058. 31 indexed citations
20.
Hallen, Mark A., Zhangyi Liang, & Sharyn A. Endow. (2008). Ncd motor binding and transport in the spindle. Journal of Cell Science. 121(22). 3834–3841. 23 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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