Manolis Maragkakis

5.6k total citations
39 papers, 4.2k citations indexed

About

Manolis Maragkakis is a scholar working on Molecular Biology, Cancer Research and Plant Science. According to data from OpenAlex, Manolis Maragkakis has authored 39 papers receiving a total of 4.2k indexed citations (citations by other indexed papers that have themselves been cited), including 36 papers in Molecular Biology, 14 papers in Cancer Research and 8 papers in Plant Science. Recurrent topics in Manolis Maragkakis's work include RNA modifications and cancer (17 papers), RNA Research and Splicing (16 papers) and MicroRNA in disease regulation (13 papers). Manolis Maragkakis is often cited by papers focused on RNA modifications and cancer (17 papers), RNA Research and Splicing (16 papers) and MicroRNA in disease regulation (13 papers). Manolis Maragkakis collaborates with scholars based in United States, Greece and Germany. Manolis Maragkakis's co-authors include Panagiotis Alexiou, Artemis G. Hatzigeorgiou, Martin Reczko, Theodore Dalamagas, Giorgio L. Papadopoulos, Thanasis Vergoulis, Zissimos P. Mourelatos, Γεώργιος Γεωργακίλας, Nectarios Koziris and Ioannis S. Vlachos and has published in prestigious journals such as Nature, Nucleic Acids Research and Journal of Biological Chemistry.

In The Last Decade

Manolis Maragkakis

39 papers receiving 4.1k citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Manolis Maragkakis United States 23 3.4k 2.7k 400 237 178 39 4.2k
Fan Lai United States 20 3.0k 0.9× 1.8k 0.7× 295 0.7× 169 0.7× 234 1.3× 33 3.7k
Thimmaiah P. Chendrimada United States 9 5.7k 1.7× 4.3k 1.6× 317 0.8× 407 1.7× 256 1.4× 13 6.4k
Richard I. Gregory United States 9 3.9k 1.1× 3.0k 1.1× 162 0.4× 342 1.4× 208 1.2× 9 4.7k
Benjamin P. Lewis United States 6 5.3k 1.6× 4.2k 1.6× 369 0.9× 370 1.6× 313 1.8× 10 6.4k
Rory Johnson Switzerland 35 5.2k 1.5× 3.8k 1.4× 283 0.7× 205 0.9× 356 2.0× 58 5.9k
Helge Großhans Switzerland 34 5.7k 1.7× 4.2k 1.6× 263 0.7× 312 1.3× 225 1.3× 63 6.8k
Shobha Vasudevan United States 20 3.8k 1.1× 2.8k 1.0× 194 0.5× 319 1.3× 274 1.5× 32 4.6k
Neil Cooch United States 14 6.0k 1.8× 3.6k 1.4× 351 0.9× 474 2.0× 547 3.1× 25 6.8k
Huili Guo Singapore 13 4.6k 1.3× 3.7k 1.4× 292 0.7× 361 1.5× 167 0.9× 21 5.4k
Ângelo Calado Portugal 19 2.7k 0.8× 1.6k 0.6× 175 0.4× 423 1.8× 186 1.0× 24 3.6k

Countries citing papers authored by Manolis Maragkakis

Since Specialization
Citations

This map shows the geographic impact of Manolis Maragkakis's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Manolis Maragkakis with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Manolis Maragkakis more than expected).

Fields of papers citing papers by Manolis Maragkakis

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Manolis Maragkakis. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Manolis Maragkakis. The network helps show where Manolis Maragkakis may publish in the future.

Co-authorship network of co-authors of Manolis Maragkakis

This figure shows the co-authorship network connecting the top 25 collaborators of Manolis Maragkakis. A scholar is included among the top collaborators of Manolis Maragkakis based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Manolis Maragkakis. Manolis Maragkakis is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Martindale, Jennifer L., et al.. (2024). Full-length direct RNA sequencing uncovers stress granule-dependent RNA decay upon cellular stress. eLife. 13. 3 indexed citations
2.
Martindale, Jennifer L., et al.. (2024). Full-length direct RNA sequencing uncovers stress granule-dependent RNA decay upon cellular stress. eLife. 13. 2 indexed citations
3.
Belair, Cédric, et al.. (2024). Deep learning and direct sequencing of labeled RNA captures transcriptome dynamics. NAR Genomics and Bioinformatics. 6(3). lqae116–lqae116. 1 indexed citations
4.
Maragkakis, Manolis, Luigi Ferrucci, Myriam Gorospe, et al.. (2023). Biology of Stress Responses in Aging. PubMed. 1(1). 20230001–20230001. 3 indexed citations
5.
Leu, N. Adrian, Anastassios Vourekas, Panagiotis Alexiou, et al.. (2023). The MOV10 RNA helicase is a dosage-dependent host restriction factor for LINE1 retrotransposition in mice. PLoS Genetics. 19(5). e1010566–e1010566. 4 indexed citations
6.
Ibrahim, Fadia, Jan Oppelt, Manolis Maragkakis, & Zissimos P. Mourelatos. (2021). TERA-Seq: true end-to-end sequencing of native RNA molecules for transcriptome characterization. Nucleic Acids Research. 49(20). e115–e115. 29 indexed citations
7.
Lee, Christopher T. & Manolis Maragkakis. (2021). SamQL: a structured query language and filtering tool for the SAM/BAM file format. BMC Bioinformatics. 22(1). 474–474. 1 indexed citations
8.
Ibrahim, Fadia, Manolis Maragkakis, Panagiotis Alexiou, & Zissimos P. Mourelatos. (2018). Ribothrypsis, a novel process of canonical mRNA decay, mediates ribosome-phased mRNA endonucleolysis. Nature Structural & Molecular Biology. 25(4). 302–310. 46 indexed citations
9.
Vrettos, Nicholas, Manolis Maragkakis, Panagiotis Alexiou, & Zissimos P. Mourelatos. (2016). Kc167, a widely used Drosophila cell line, contains an active primary piRNA pathway. RNA. 23(1). 108–118. 13 indexed citations
10.
Maragkakis, Manolis, Panagiotis Alexiou, Tadashi Nakaya, & Zissimos P. Mourelatos. (2015). CLIPSeqTools—a novel bioinformatics CLIP-seq analysis suite. RNA. 22(1). 1–9. 40 indexed citations
11.
Liu, Xuhang, Qi Zheng, Nicholas Vrettos, et al.. (2014). A MicroRNA Precursor Surveillance System in Quality Control of MicroRNA Synthesis. Molecular Cell. 55(6). 868–879. 69 indexed citations
12.
Honda, Shozo, Manolis Maragkakis, Panagiotis Alexiou, et al.. (2013). Mitochondrial protein BmPAPI modulates the length of mature piRNAs. RNA. 19(10). 1405–1418. 66 indexed citations
13.
Nakaya, Tadashi, Panagiotis Alexiou, Manolis Maragkakis, Alexandra Chang, & Zissimos P. Mourelatos. (2013). FUS regulates genes coding for RNA-binding proteins in neurons by binding to their highly conserved introns. RNA. 19(4). 498–509. 87 indexed citations
14.
Ibrahim, Fadia, Manolis Maragkakis, Panagiotis Alexiou, et al.. (2013). Identification of In Vivo, Conserved, TAF15 RNA Binding Sites Reveals the Impact of TAF15 on the Neuronal Transcriptome. Cell Reports. 3(2). 301–308. 29 indexed citations
15.
Paraskevopoulou, Maria D., Γεώργιος Γεωργακίλας, Nikos Kostoulas, et al.. (2012). DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs. Nucleic Acids Research. 41(D1). D239–D245. 291 indexed citations
16.
Vlachos, Ioannis S., Nikos Kostoulas, Thanasis Vergoulis, et al.. (2012). DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways. Nucleic Acids Research. 40(W1). W498–W504. 456 indexed citations
17.
Vourekas, Anastassios, Qi Zheng, Panagiotis Alexiou, et al.. (2012). Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis. Nature Structural & Molecular Biology. 19(8). 773–781. 198 indexed citations
18.
Reczko, Martin, Manolis Maragkakis, Panagiotis Alexiou, Giorgio L. Papadopoulos, & Artemis G. Hatzigeorgiou. (2012). Accurate microRNA Target Prediction Using Detailed Binding Site Accessibility and Machine Learning on Proteomics Data. Frontiers in Genetics. 2. 103–103. 31 indexed citations
19.
Maragkakis, Manolis, Thanasis Vergoulis, Panagiotis Alexiou, et al.. (2011). DIANA-microT Web server upgrade supports Fly and Worm miRNA target prediction and bibliographic miRNA to disease association. Nucleic Acids Research. 39(suppl). W145–W148. 116 indexed citations
20.
Alexiou, Panagiotis, Manolis Maragkakis, Giorgio L. Papadopoulos, Martin Reczko, & Artemis G. Hatzigeorgiou. (2009). Lost in translation: an assessment and perspective for computational microRNA target identification. Computer applications in the biosciences. 25(23). 3049–3055. 258 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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