Lee Kamentsky

5.0k total citations · 2 hit papers
21 papers, 2.9k citations indexed

About

Lee Kamentsky is a scholar working on Biophysics, Molecular Biology and Parasitology. According to data from OpenAlex, Lee Kamentsky has authored 21 papers receiving a total of 2.9k indexed citations (citations by other indexed papers that have themselves been cited), including 13 papers in Biophysics, 11 papers in Molecular Biology and 4 papers in Parasitology. Recurrent topics in Lee Kamentsky's work include Cell Image Analysis Techniques (13 papers), Single-cell and spatial transcriptomics (6 papers) and Parasites and Host Interactions (4 papers). Lee Kamentsky is often cited by papers focused on Cell Image Analysis Techniques (13 papers), Single-cell and spatial transcriptomics (6 papers) and Parasites and Host Interactions (4 papers). Lee Kamentsky collaborates with scholars based in United States, United Kingdom and Sweden. Lee Kamentsky's co-authors include Anne E. Carpenter, Louis A. Kamentsky, Kevin W. Eliceiri, Mark‐Anthony Bray, Derek Thirstrup, Liya Ding, Claire McQuin, Kyle W. Karhohs, Thouis R. Jones and Shantanu Singh and has published in prestigious journals such as Journal of Clinical Investigation, Nature Communications and Bioinformatics.

In The Last Decade

Lee Kamentsky

20 papers receiving 2.8k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

CellProfiler 3.0: Next-generation image processing for biology

2018 1.2k citations Claire McQuin, Allen Goodman et al. PLoS Biology profile →
Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software

2011 765 citations Lee Kamentsky, Thouis R. Jones et al. Bioinformatics profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Lee Kamentsky United States	13	1.5k	984	329	280	246	21	2.9k
Allen Goodman United States	12	1.4k 0.9×	1.1k 1.1×	301 0.9×	297 1.1×	242 1.0×	18	3.1k
Mark‐Anthony Bray United States	24	1.2k 0.8×	656 0.7×	418 1.3×	483 1.7×	254 1.0×	37	2.8k
Kyle W. Karhohs United States	10	1.5k 1.0×	850 0.9×	304 0.9×	215 0.8×	404 1.6×	14	2.7k
Beth A. Cimini United States	16	3.0k 1.9×	1.1k 1.1×	409 1.2×	293 1.0×	293 1.2×	44	4.6k
Joseph Chang United States	12	2.5k 1.6×	1.3k 1.4×	581 1.8×	428 1.5×	349 1.4×	13	4.4k
Holger Erfle Germany	28	1.8k 1.2×	614 0.6×	407 1.2×	255 0.9×	132 0.5×	87	2.8k
Carolina Wählby Sweden	26	1.7k 1.1×	943 1.0×	228 0.7×	343 1.2×	194 0.8×	101	3.2k
Susanne M. Rafelski United States	21	1.7k 1.1×	575 0.6×	466 1.4×	248 0.9×	132 0.5×	31	2.6k
Vannary Meas‐Yedid France	24	834 0.5×	593 0.6×	386 1.2×	226 0.8×	119 0.5×	47	2.6k
Winfried Wiegraebe United States	9	1.1k 0.7×	448 0.5×	269 0.8×	187 0.7×	197 0.8×	11	2.1k

Countries citing papers authored by Lee Kamentsky

Since Specialization

Citations

This map shows the geographic impact of Lee Kamentsky's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Lee Kamentsky with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Lee Kamentsky more than expected).

Fields of papers citing papers by Lee Kamentsky

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Lee Kamentsky. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Lee Kamentsky. The network helps show where Lee Kamentsky may publish in the future.

Co-authorship network of co-authors of Lee Kamentsky

This figure shows the co-authorship network connecting the top 25 collaborators of Lee Kamentsky. A scholar is included among the top collaborators of Lee Kamentsky based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Lee Kamentsky. Lee Kamentsky is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Kamentsky, Lee, Giacomo Mazzamuto, Alberto Lazari, et al.. (2022). Microscopy-BIDS: An Extension to the Brain Imaging Data Structure for Microscopy Data. Frontiers in Neuroscience. 16. 871228–871228. 10 indexed citations

Roy, Dheeraj S., Young-Gyun Park, Ying Zhang, et al.. (2022). Brain-wide mapping reveals that engrams for a single memory are distributed across multiple brain regions. Nature Communications. 13(1). 1799–1799. 119 indexed citations

Gjesteby, Lars, et al.. (2022). Axon Tracing and Centerline Detection using Topologically-Aware 3D U-Nets. 2022 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC). 2022. 238–242. 4 indexed citations

Lin, Zudi, Donglai Wei, Won-Dong Jang, et al.. (2020). Two Stream Active Query Suggestion for Active Learning in Connectomics. Lecture notes in computer science. 12363. 103–120. 10 indexed citations

Melo‐Filho, Cleber C., Mário Roberto Senger, Rodolpho C. Braga, et al.. (2020). QSAR-Driven Discovery of Novel Chemical Scaffolds Active against Schistosoma mansoni. Figshare.

McQuin, Claire, Allen Goodman, Vasiliy S. Chernyshev, et al.. (2018). CellProfiler 3.0: Next-generation image processing for biology. PLoS Biology. 16(7). e2005970–e2005970. 1172 indexed citations breakdown →

Haehn, Daniel, Ali K. Al-Awami, Lee Kamentsky, et al.. (2017). Scalable Interactive Visualization for Connectomics. Informatics. 4(3). 29–29. 16 indexed citations

Melo‐Filho, Cleber C., Rafael Ferreira Dantas, Rodolpho C. Braga, et al.. (2016). QSAR-Driven Discovery of Novel Chemical Scaffolds Active against Schistosoma mansoni. Journal of Chemical Information and Modeling. 56(7). 1357–1372. 41 indexed citations

Hennig, Holger, Paul Rees, Thomas Blasi, et al.. (2016). An open-source solution for advanced imaging flow cytometry data analysis using machine learning. Methods. 112. 201–210. 73 indexed citations

10.

Neves, Bruno J., Rafael Ferreira Dantas, Mário Roberto Senger, et al.. (2016). The antidepressant drug paroxetine as a new lead candidate in schistosome drug discovery. MedChemComm. 7(6). 1176–1182. 12 indexed citations

11.

Neves, Bruno J., Rafael Ferreira Dantas, Mário Roberto Senger, et al.. (2016). Discovery of New Anti-Schistosomal Hits by Integration of QSAR-Based Virtual Screening and High Content Screening. Journal of Medicinal Chemistry. 59(15). 7075–7088. 61 indexed citations

12.

Metelo, Ana M., Xiang Li, Youngnam N. Jin, et al.. (2015). Pharmacological HIF2α inhibition improves VHL disease–associated phenotypes in zebrafish model. Journal of Clinical Investigation. 125(5). 1987–1997. 38 indexed citations

13.

Wählby, Carolina, Annie L. Conery, Mark‐Anthony Bray, et al.. (2014). High- and low-throughput scoring of fat mass and body fat distribution in C. elegans. Methods. 68(3). 492–499. 54 indexed citations

14.

Carpenter, Anne E., Lee Kamentsky, & Kevin W. Eliceiri. (2012). A call for bioimaging software usability. Nature Methods. 9(7). 666–670. 95 indexed citations

15.

Wählby, Carolina, Lee Kamentsky, Tammy Riklin Raviv, et al.. (2012). An image analysis toolbox for high-throughput C. elegans assays. Nature Methods. 9(7). 714–716. 6 indexed citations

16.

Kamentsky, Lee, Thouis R. Jones, Adam Fraser, et al.. (2011). Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software. Bioinformatics. 27(8). 1179–1180. 765 indexed citations breakdown →

17.

Kamentsky, Louis A., et al.. (1997). Methods for automatic multiparameter analysis of fluorescence in situ hybridized specimens with a laser scanning cytometer. Cytometry. 27(2). 117–125. 33 indexed citations

18.

Kamentsky, Louis A., et al.. (1997). Slide-Based Laser Scanning Cytometry. Acta Cytologica. 41(1). 123–143. 151 indexed citations

19.

Kamentsky, Louis A., et al.. (1996). CompuCyte Corporation. Acta Cytologica. 40(1). 31–36. 8 indexed citations

20.

Kamentsky, Louis A. & Lee Kamentsky. (1991). Microscope‐based multiparameter laser scanning cytometer yielding data comparable to flow cytometry data. Cytometry. 12(5). 381–387. 196 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

Explore authors with similar magnitude of impact