Jonathan Spindler

3.7k citations

26 papers · 1.9k indexed · 1 hit paper · h-index 15

Virology top 0.5%
- HIV Research and Treatment 19
Infectious Diseases top 1%
- HIV/AIDS drug development and treatment 14
- HIV/AIDS Research and Interventions 11
Immunology top 5%
- Immune Cell Function and Interaction 4
Epidemiology top 10%
- Cytomegalovirus and herpesvirus research 6
Emergency Medicine top 10%
Genetics
- Virus-based gene therapy research 3
Oncology
- Viral-associated cancers and disorders 2
Psychiatry and Mental health
- Fibromyalgia and Chronic Fatigue Syndrome Research 2

Co-authors: Mary F. Kearney John W. Mellors John M. Coffin Wei Shao Frank Maldarelli Stephen H. Hughes Francesco R. Simonetti Xiaolin Wu
Cited by: Virology Infectious Diseases Immunology
Journals: Journal of Virology (3 papers)Retrovirology (2 papers)Journal of Visualized Experiments (2 papers)
Partner nations: United States South Africa Italy

In The Last Decade

Jonathan Spindler

26 papers receiving 1.9k citations

Hit Papers

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Peers

Countries citing papers authored by Jonathan Spindler

Since Specialization

Citations

This map shows the geographic impact of Jonathan Spindler's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jonathan Spindler with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jonathan Spindler more than expected).

Fields of papers citing papers by Jonathan Spindler

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jonathan Spindler. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jonathan Spindler. The network helps show where Jonathan Spindler may publish in the future.

Co-authorship network

The 25 scholars most cited alongside Jonathan Spindler, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Jonathan Spindler Line = papers co-authored together Jonathan Spindler links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	HIV-1 control in vivo is related to the number but not the fraction of infected cells with viral unspliced RNA Proceedings of the National Academy of Sciences ·Adam A. Capoferri,Ann Wiegand,Feiyu Hong,Jana L. Jacobs,Jonathan Spindler,Andrew Musick,Michael J. Bale,Wei Shao,Michele D. Sobolewski,Anthony R. Cillo,Brian T. Luke,Christine M. Fennessey,Robert J. Gorelick,Rebecca Hoh,Elias K. Halvas,Steven G. Deeks,John M. Coffin,John W. Mellors,Mary F. Kearney	2024	3
2	Early Emergence and Long-Term Persistence of HIV-Infected T-Cell Clones in Children mBio ·Michael J. Bale,Luana da Silva Freitas,あや美禿,Xiaolin Wu,Jonathan Spindler,Elias K. Halvas,Joshua C. Cyktor,Ann Wiegand,Wei Shao,Mark F. Cotton,Stephen H. Hughes,John W. Mellors,John M. Coffin,Gert U. van Zyl,Mary F. Kearney	2021	9
3	Clones of infected cells arise early in HIV-infected individuals JCI Insight ·John M. Coffin,David W. Wells,Jennifer M. Zerbato,JoAnn Kuruc,Shuang Guo,Brian T. Luke,Joseph J. Eron,Michael J. Bale,Jonathan Spindler,Francesco R. Simonetti,Shawn Hill,Mary F. Kearney,Frank Maldarelli,Xiaolin Wu,John W. Mellors,Stephen H. Hughes	2019	57
4	HIV Infected T Cells Can Proliferate in vivo Without Inducing Expression of the Integrated Provirus Frontiers in Microbiology ·Andrew Musick,Jonathan Spindler,Eli Boritz,Liliana Pérez,茆美琴,Sean C. Patro,Michele D. Sobolewski,Michael J. Bale,Carolyn Reid,Brandon F. Keele,Adam A. Capoferri,Wei Shao,Ann Wiegand,Francesco R. Simonetti,John W. Mellors,Stephen H. Hughes,John M. Coffin,Frank Maldarelli,Mary F. Kearney	2019	44
5	A9 A method to obtain full-length HIV proviral sequences and their sites of integration Virus Evolution ·Sean C. Patro,Xiaolin Wu,Shuang Guo,Michael J. Bale,Ann Wiegand,Jonathan Spindler,Christine M. Fennessey,Elias K. Halvas,Brandon F. Keele,Stephen H. Hughes,John W. Mellors,John M. Coffin,Jason W. Rausch,Mary F. Kearney	2019	1
6	Lower pre-ART intra-participant HIV-1 pol diversity may not be associated with virologic failure in adults PLoS ONE ·Mary F. Kearney,Jonathan Spindler,Ann Wiegand,Wei Shao,Richard Haubrich,Sharon A. Riddler,Christina M. Lalama,Michael D. Hughes,John M. Coffin,John W. Mellors	2018	2
7	No evidence of HIV replication in children on antiretroviral therapy Journal of Clinical Investigation ·Gert U. van Zyl,Luana da Silva Freitas,Ann Wiegand,William R. McManus,Michael J. Bale,Elias K. Halvas,Brian T. Luke,Valerie F. Boltz,Jonathan Spindler,Barbara Laughton,Susan Engelbrecht,John M. Coffin,Mark F. Cotton,Wei Shao,John W. Mellors,Mary F. Kearney	2017	55
8	Proviruses with identical sequences comprise a large fraction of the replication-competent HIV reservoir PLoS Pathogens ·John Bui,Michele D. Sobolewski,Brandon F. Keele,Jonathan Spindler,Andrew Musick,Ann Wiegand,Brian T. Luke,Wei Shao,Stephen H. Hughes,John M. Coffin,Mary F. Kearney,John W. Mellors	2017	174
9	Single-cell analysis of HIV-1 transcriptional activity reveals expression of proviruses in expanded clones during ART Proceedings of the National Academy of Sciences ·Ann Wiegand,Jonathan Spindler,Feiyu Hong,Wei Shao,Joshua C. Cyktor,Anthony R. Cillo,Elias K. Halvas,John M. Coffin,John W. Mellors,Mary F. Kearney	2017	124
10	B-108 Specific HIV integration sites are linked to clonal expansion and persistence of infected cells JAIDS Journal of Acquired Immune Deficiency Syndromes ·Frank Maldarelli,Xiaolin Wu,Ling Su,Francesco R. Simonetti,David W. Wells,Wei Shao,Jonathan Spindler,Andrea L. Ferris,John W. Mellors,Mary F. Kearney,John M. Coffin,Stephen H. Hughes	2016	220
11	Well-mixed plasma and tissue viral populations in RT-SHIV-infected macaques implies a lack of viral replication in the tissues during antiretroviral therapy Retrovirology ·Mary F. Kearney,Elizabeth M. Anderson,Yanju Yao,Nguyen Le Thu,Wei Shao,Nicholas Johnson,Christopher E. Kline,Jonathan Spindler,John W. Mellors,John M. Coffin,Zandrea Ambrose	2015	20
12	Therapeutic Vaccination With Dendritic Cells Loaded With Autologous HIV Type 1–Infected Apoptotic Cells The Journal of Infectious Diseases ·Bernard Macatangay,Sharon A. Riddler,Nicole Wheeler,Jonathan Spindler,Mariam B. Lawani,Feiyu Hong,Mary Jo Buffo,Theresa L. Whiteside,Mary F. Kearney,John W. Mellors,Charles R. Rinaldo	2015	38
13	Specific HIV integration sites are linked to clonal expansion and persistence of infected cellsbreakdown → Science ·Frank Maldarelli,Xiaolin Wu,Li Su,Francesco R. Simonetti,Wei Shao,Malaz Kserawi,Jonathan Spindler,Andrea L. Ferris,John W. Mellors,Mary F. Kearney,John M. Coffin,Stephen H. Hughes	2014	598
14	PAPNC, a novel method to calculate nucleotide diversity from large scale next generation sequencing data Journal of Virological Methods ·Wei Shao,Mary F. Kearney,Valerie F. Boltz,Jonathan Spindler,John W. Mellors,Frank Maldarelli,John M. Coffin	2014	13
15	Lack of Detectable HIV-1 Molecular Evolution during Suppressive Antiretroviral Therapy PLoS Pathogens ·Mary F. Kearney,Jonathan Spindler,Wei Shao,傅国海,Elizabeth M. Anderson,Yulia Ningsih,Catherine Rehm,Sherly Erni Lidia Wakum,N. Kovács,John W. Mellors,John M. Coffin,Frank Maldarelli	2014	172
16	Analysis of 454 sequencing error rate, error sources, and artifact recombination for detection of Low-frequency drug resistance mutations in HIV-1 DNA Retrovirology ·Wei Shao,Valerie F. Boltz,Jonathan Spindler,Mary F. Kearney,Frank Maldarelli,John W. Mellors,Claudia Stewart,Natalia Volfovsky,Chiara Melotti,Robert M. Stephens,John M. Coffin	2013	81
17	Multiple Sources of Contamination in Samples from Patients Reported to Have XMRV Infection PLoS ONE ·Mary F. Kearney,Jonathan Spindler,Ann Wiegand,Wei Shao,Elizabeth M. Anderson,Frank Maldarelli,Francis W. Ruscetti,John W. Mellors,S H Hughes,Stuart F.J. Le Grice,John M. Coffin	2012	33
18	Amplifying and Quantifying HIV-1 RNA in HIV Infected Individuals with Viral Loads Below the Limit of Detection by Standard Clinical Assays Journal of Visualized Experiments ·Helene Mens,Mary F. Kearney,Ann Wiegand,Jonathan Spindler,Frank Maldarelli,John W. Mellors,John M. Coffin	2011	10
19	Amplifying and Quantifying HIV-1 RNA in HIV Infected Individuals with Viral Loads Below the Limit of Detection by Standard Clinical Assays Journal of Visualized Experiments ·Helene Mens,Mary F. Kearney,Ann Wiegand,Jonathan Spindler,Frank Maldarelli,John W. Mellors,John M. Coffin	2011	1
20	Brd4 Is Required for E2-Mediated Transcriptional Activation but Not Genome Partitioning of All Papillomaviruses Journal of Virology ·Maria G. McPhillips,Jaquelline Germano de Oliveira,Jonathan Spindler,Ruchira Mitra,Alison A. McBride	2006	141

About Jonathan Spindler

Jonathan Spindler is a scholar working on Virology, Infectious Diseases, Immunology, Epidemiology and Animal Science and Zoology, having authored 26 papers that have together received 1.9k indexed citations. Recurring topics across this work include HIV Research and Treatment (19 papers), HIV/AIDS drug development and treatment (14 papers), HIV/AIDS Research and Interventions (11 papers), Cytomegalovirus and herpesvirus research (6 papers), Immune Cell Function and Interaction (4 papers), Virus-based gene therapy research (3 papers), Viral-associated cancers and disorders (2 papers) and Fibromyalgia and Chronic Fatigue Syndrome Research (2 papers). The work is most often cited by research in Virology (1.4k citations), Infectious Diseases (970 citations), Immunology (527 citations), Epidemiology (414 citations) and Emergency Medicine (75 citations). Jonathan Spindler has collaborated with scholars based in United States, South Africa and Italy. Frequent co-authors include Mary F. Kearney, John W. Mellors, John M. Coffin, Wei Shao, Frank Maldarelli, Stephen H. Hughes, Francesco R. Simonetti, Xiaolin Wu, Andrea L. Ferris and Li Su. Their work appears in journals such as Journal of Virology, Retrovirology, Journal of Visualized Experiments, Advances in Virology and Journal of Virus Eradication.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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